Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_E10_e461_10.seq
(1519 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0117 - 12486672-12486818,12487438-12487488,12487583-124877... 294 1e-79
10_02_0022 - 4290708-4290788,4291254-4291305,4291396-4291484,429... 273 3e-73
06_01_0262 - 1930552-1930632,1931096-1931152,1931236-1931287,193... 249 5e-66
03_02_0365 - 7816966-7817046,7817441-7817492,7817590-7817678,781... 138 5e-52
03_02_0477 - 8770905-8770985,8771164-8771361,8771939-8772025,877... 190 3e-48
10_08_0214 - 15915156-15915713 34 0.26
07_03_1751 - 29215074-29216270 33 0.45
10_08_0213 - 15912048-15912716 31 1.8
05_03_0458 + 14280953-14281866,14281964-14282912 31 1.8
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 31 3.2
06_01_1028 - 8022903-8023050,8023151-8023276,8023977-8024074,802... 31 3.2
06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850 31 3.2
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 29 9.7
07_03_0560 + 19479597-19480667 29 9.7
>09_03_0117 - 12486672-12486818,12487438-12487488,12487583-12487729,
12488037-12488354,12488450-12488604,12488941-12489248,
12490644-12491038
Length = 506
Score = 294 bits (722), Expect = 1e-79
Identities = 156/298 (52%), Positives = 198/298 (66%), Gaps = 3/298 (1%)
Frame = +2
Query: 119 IKSIKARQIFDSRGNPTVEVDLVTELG-LFRAAVPSGASTGVHEALELRDNIKSEYHGKG 295
++SI+ARQI DSRGNPTVEVDLV G L R+AVPSGASTG++EALELRD + Y GKG
Sbjct: 51 VRSIRARQIVDSRGNPTVEVDLVAGDGRLHRSAVPSGASTGIYEALELRDGDGAAYGGKG 110
Query: 296 VLTAIKNINDIIAPELLSKNIEVTEQREIDQLMLKLDGTENKSKLGANAILGVSLXXXXX 475
VL A++NIN++IAP+L+ ++V Q ++D +ML +DGT NKSKLGANAILGVSL
Sbjct: 111 VLNAVRNINEVIAPKLVG--VDVRNQSDVDAIMLDIDGTPNKSKLGANAILGVSLSVCRA 168
Query: 476 XXXXXDVPLYKHLADLSGNKDIVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEA 655
+VPLYKH+ +L+G K++V+PVPAFNVINGGSHAGN LAMQEFM+LP GASSFSEA
Sbjct: 169 GAGAKEVPLYKHIQELAGTKELVMPVPAFNVINGGSHAGNNLAMQEFMLLPVGASSFSEA 228
Query: 656 MRMGSEVYHYLKKXIKEKFGLDSTAVGDEGGFAPTSXTTRKLSISFRMLSXRLDXLAKFA 835
+RMGSEVYH LK IK K+G D+ VGDEGGFAP R+ + + K
Sbjct: 229 LRMGSEVYHALKGIIKAKYGQDACNVGDEGGFAPNVQDNREGLVLLMDAIEKAGYSGKIK 288
Query: 836 LAWMXLLLNSF--KMGPMTLTSXILTXTPXNICLLKKLTXXXLGXXKDFPMGXLXXPF 1003
+ M + + F K G L ++ ++L KDFP+ + PF
Sbjct: 289 IG-MDVAASEFLTKDGSYDLNFKNQPNDGAHVLSAQRLCDLYKEFVKDFPIVSIEDPF 345
>10_02_0022 -
4290708-4290788,4291254-4291305,4291396-4291484,
4291565-4291615,4291699-4291893,4292010-4292090,
4292190-4292252,4292480-4292554,4292630-4292710,
4292784-4292888,4292977-4293057,4293156-4293242,
4293322-4293369,4293923-4293987,4294109-4294172,
4294828-4294896
Length = 428
Score = 273 bits (669), Expect = 3e-73
Identities = 145/221 (65%), Positives = 169/221 (76%), Gaps = 8/221 (3%)
Frame = +2
Query: 119 IKSIKARQIFDSRGNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEYHGKG 295
I S+KARQIFDSRGNPTVEVD+ G F RAAVPSGASTGV+EALELRD S+Y GKG
Sbjct: 5 IVSVKARQIFDSRGNPTVEVDVCCSDGTFARAAVPSGASTGVYEALELRDG-GSDYLGKG 63
Query: 296 VLTAIKNINDIIAPELLSKNIEVTEQREIDQLMLK-LDGTEN-----KSKLGANAILGVS 457
V A+ N+N +IAP L+ K + T Q E+D M++ LDGT+N K KLGANAIL VS
Sbjct: 64 VSKAVDNVNSVIAPALIGK--DPTSQAELDNFMVQQLDGTKNEWGWCKQKLGANAILAVS 121
Query: 458 LXXXXXXXXXXDVPLYKHLADLSGNKDIVLPVPAFNVINGGSHAGNKLAMQ-EFMILPTG 634
L +PLY+H+A+L+GNK +VLPVPAFNVINGGSHAGNKLAMQ EFMILPTG
Sbjct: 122 LAICKAGAIIKKIPLYQHIANLAGNKQLVLPVPAFNVINGGSHAGNKLAMQAEFMILPTG 181
Query: 635 ASSFSEAMRMGSEVYHYLKKXIKEKFGLDSTAVGDEGGFAP 757
A+SF EAM+MG EVYH LK IK+K+G D+T VGDEGGFAP
Sbjct: 182 AASFKEAMKMGVEVYHNLKSVIKKKYGQDATNVGDEGGFAP 222
Score = 61.7 bits (143), Expect = 1e-09
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Frame = +1
Query: 742 GWFCSNIQXNKEALYLIQDAIXQAGXXGKICIGMDXAASEFF--QDGAYDLDFXNPN 906
G F NIQ NKE L L++ AI +AG GK+ IGMD AASEF+ +D YDL+F N
Sbjct: 218 GGFAPNIQENKEGLELLKTAIEKAGYTGKVVIGMDVAASEFYNDKDKTYDLNFKEEN 274
>06_01_0262 -
1930552-1930632,1931096-1931152,1931236-1931287,
1931373-1931461,1931551-1931601,1931696-1931890,
1932015-1932095,1932205-1932267,1933045-1933119,
1933194-1933352,1933353-1933463,1933536-1933616,
1933721-1933807,1933920-1933967,1934357-1934421,
1935002-1935065,1935220-1935288
Length = 475
Score = 249 bits (609), Expect = 5e-66
Identities = 146/249 (58%), Positives = 170/249 (68%), Gaps = 36/249 (14%)
Frame = +2
Query: 119 IKSIKARQIFDSRGNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEYHGKG 295
I+S+KARQIFDSRGNPTVEVD+ G F R AVPSGASTG++EALELRD S+Y GKG
Sbjct: 5 IQSVKARQIFDSRGNPTVEVDVGLSDGSFARGAVPSGASTGIYEALELRDG-GSDYLGKG 63
Query: 296 VLTAIKNINDIIAPELLSKNIEVTEQREIDQLMLK-LDGTEN-----KSKLGANAILGVS 457
VL A+ N+N II P L+ K + TEQ +ID M++ LDGT N K KLGANAIL VS
Sbjct: 64 VLKAVSNVNTIIGPALIGK--DPTEQVDIDNFMVQQLDGTSNNWGWCKQKLGANAILAVS 121
Query: 458 LXXXXXXXXXXDVPLYK---HLADLSGNKDIVLPVPAFNVINGGSHAGNKLAM------- 607
L +PLY+ H+A+L+GNK +VLPVPAFNVINGGSHAGNKLAM
Sbjct: 122 LAVCKAGAMVKKIPLYQKLQHIANLAGNKTLVLPVPAFNVINGGSHAGNKLAMQVKYCLN 181
Query: 608 -------------------QEFMILPTGASSFSEAMRMGSEVYHYLKKXIKEKFGLDSTA 730
QEFMILPTGASSF EAM+MG EVYH+LK IK+K+G D+T
Sbjct: 182 NKTMSMHDSVIFSAHLAAVQEFMILPTGASSFKEAMKMGVEVYHHLKSIIKKKYGQDATN 241
Query: 731 VGDEGGFAP 757
VGDEGGFAP
Sbjct: 242 VGDEGGFAP 250
Score = 61.7 bits (143), Expect = 1e-09
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Frame = +1
Query: 742 GWFCSNIQXNKEALYLIQDAIXQAGXXGKICIGMDXAASEFF--QDGAYDLDFXNPN 906
G F NIQ NKE L L++ AI +AG GK+ IGMD AASEF+ +D YDL+F N
Sbjct: 246 GGFAPNIQENKEGLELLKAAIAKAGYTGKVVIGMDVAASEFYSEKDKTYDLNFKEDN 302
>03_02_0365 -
7816966-7817046,7817441-7817492,7817590-7817678,
7817762-7817854,7817900-7818094,7818172-7818249,
7818353-7818415,7818806-7818880,7818958-7819038,
7819329-7819409,7819516-7819602,7819682-7819729,
7820317-7820381,7820566-7820629,7821254-7821322
Length = 406
Score = 138 bits (335), Expect(2) = 5e-52
Identities = 81/137 (59%), Positives = 95/137 (69%), Gaps = 7/137 (5%)
Frame = +2
Query: 119 IKSIKARQIFDSRGNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEYHGKG 295
I+S+KARQIFDSRGNPTVEVD+ G F RAAVPSGASTGV+EALELRD S+Y GKG
Sbjct: 5 IQSVKARQIFDSRGNPTVEVDICCSDGTFARAAVPSGASTGVYEALELRDG-GSDYLGKG 63
Query: 296 VLTAIKNINDIIAPELLSKNIEVTEQREIDQLML-KLDGTEN-----KSKLGANAILGVS 457
VL A+ N+N II P L+ K + TEQ ID M+ +LDGT+N K KLGANAIL VS
Sbjct: 64 VLKAVDNVNSIIGPALIGK--DPTEQTVIDNFMVQQLDGTKNEWGWCKQKLGANAILAVS 121
Query: 458 LXXXXXXXXXXDVPLYK 508
L +PLY+
Sbjct: 122 LALCKAGAIIKKIPLYQ 138
Score = 85.4 bits (202), Expect(2) = 5e-52
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = +2
Query: 608 QEFMILPTGASSFSEAMRMGSEVYHYLKKXIKEKFGLDSTAVGDEGGFAP 757
QEFMILPTGASSF EAM+MG EVYH LK IK+K+G D+T VGDEGGFAP
Sbjct: 138 QEFMILPTGASSFKEAMKMGVEVYHNLKSVIKKKYGQDATNVGDEGGFAP 187
Score = 62.9 bits (146), Expect = 6e-10
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 742 GWFCSNIQXNKEALYLIQDAIXQAGXXGKICIGMDXAASEFF-QDGAYDLDFXNPN 906
G F NIQ NKE L L++ AI +AG GK+ IGMD AASEF+ +D YDL+F N
Sbjct: 183 GGFAPNIQENKEGLELLKTAIEKAGYTGKVVIGMDVAASEFYTEDQTYDLNFKEEN 238
>03_02_0477 -
8770905-8770985,8771164-8771361,8771939-8772025,
8772094-8772179,8772270-8772368,8772431-8772551,
8773251-8773331,8773643-8773723,8773972-8774088,
8774185-8774256,8774621-8775055
Length = 485
Score = 190 bits (462), Expect = 3e-48
Identities = 94/213 (44%), Positives = 134/213 (62%)
Frame = +2
Query: 119 IKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGKGV 298
I S++ARQI D RG P VEV L T + RA+ + + A +RD K + + V
Sbjct: 47 ITSVRARQILDGRGEPAVEVSLHTNKAVHRASAAAADAPEGAAADAVRDAEKRKLLARAV 106
Query: 299 LTAIKNINDIIAPELLSKNIEVTEQREIDQLMLKLDGTENKSKLGANAILGVSLXXXXXX 478
A++ IND ++ L+ ++ +Q +IDQ ++ LD +K+++G N++L VS+
Sbjct: 107 ADAVRVINDKVSEALVG--MDPQQQSQIDQAIMDLDKAHHKAEIGVNSMLAVSIAACKAG 164
Query: 479 XXXXDVPLYKHLADLSGNKDIVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAM 658
+VPLYKH+A+L G LP+PA VINGG+HAGN L +QE MILP GA +F EAM
Sbjct: 165 AAEKEVPLYKHIAELVGKSATTLPIPAITVINGGTHAGNSLPIQEIMILPVGAKNFEEAM 224
Query: 659 RMGSEVYHYLKKXIKEKFGLDSTAVGDEGGFAP 757
+MGSE YH+LK I EK+G +S +GD+GGFAP
Sbjct: 225 QMGSETYHHLKDIILEKYGSNSCNIGDDGGFAP 257
>10_08_0214 - 15915156-15915713
Length = 185
Score = 34.3 bits (75), Expect = 0.26
Identities = 29/132 (21%), Positives = 31/132 (23%), Gaps = 1/132 (0%)
Frame = -2
Query: 1458 GXGXXXXGGGXXXXXKXXXXXXXXGXXXXXGGXXXXXXXXXXXXXGXGXXXXXXWGXXGX 1279
G G GGG G GG G G G G
Sbjct: 32 GGGGGGGGGGEGGGGGYGGSGYGSGSGYGEGGGSGGAAGGGYGRGGGGGGGGGEGGGSGS 91
Query: 1278 XXXXXXGXGXGXGXXGXXXXXXXGXGXXG-XXGXXXXGRXXXXXXXXXXGXXAXXXXXFX 1102
G G G G G G G G G G+ G +
Sbjct: 92 GYGSGQGSGYGAGVGGAGGYGSGGGGGGGQGGGAGGYGQGSGYGSGYGSGAGGAHGGGYG 151
Query: 1101 XGGGXVRXGXGG 1066
GGG G GG
Sbjct: 152 SGGGG--GGGGG 161
>07_03_1751 - 29215074-29216270
Length = 398
Score = 33.5 bits (73), Expect = 0.45
Identities = 32/149 (21%), Positives = 32/149 (21%)
Frame = -2
Query: 1512 GXRXXXGXXXXVXGXRXXGXGXXXXGGGXXXXXKXXXXXXXXGXXXXXGGXXXXXXXXXX 1333
G G G G G GGG G GG
Sbjct: 162 GAGGGGGLGGGAGGGAGGGLGGGSGGGGGLGGGAGGGAGVGGGAGGGAGGGGGLGGGAGG 221
Query: 1332 XXXGXGXXXXXXWGXXGXXXXXXXGXGXGXGXXGXXXXXXXGXGXXGXXGXXXXGRXXXX 1153
G G G G G G G G G G G G G
Sbjct: 222 GAGGGGGLGGGAGGGHGGGGGLGGGAGGGAGVGGGAGGGAGAGGGLGAGGGAGGG--GGI 279
Query: 1152 XXXXXXGXXAXXXXXFXXGGGXVRXGXGG 1066
G A GGG G GG
Sbjct: 280 GGGAGGGAGAGGGFGGGKGGGFGGGGGGG 308
Score = 29.9 bits (64), Expect = 5.5
Identities = 30/137 (21%), Positives = 30/137 (21%), Gaps = 1/137 (0%)
Frame = -2
Query: 1473 GXRXXGXGXXXXGGGXXXXXKXXXXXXXXGXXXXXGGXXXXXXXXXXXXXGXGXXXXXXW 1294
G G G GGG G GG G G
Sbjct: 126 GGGLGGGGGGGAGGGLGGGAGGGAGAGVGGGAGAGGGAGGGGGLGGGAGGGAGGGLG--- 182
Query: 1293 GXXGXXXXXXXGXGXGXGXXGXXXXXXXGXGXXGXXGXXXXGRXXXXXXXXXXGXXAXXX 1114
G G G G G G G G G G G G
Sbjct: 183 GGSGGGGGLGGGAGGGAGVGGGAGGGAGGGGGLGGGAGGGAGGGGGLGGGAGGGHGGGGG 242
Query: 1113 XXFXXGGGX-VRXGXGG 1066
GGG V G GG
Sbjct: 243 LGGGAGGGAGVGGGAGG 259
Score = 29.9 bits (64), Expect = 5.5
Identities = 31/150 (20%), Positives = 31/150 (20%), Gaps = 1/150 (0%)
Frame = -2
Query: 1512 GXRXXXGXXXXVXGXRXXGXGXXXXGGGXXXXXKXXXXXXXXGXXXXXGGXXXXXXXXXX 1333
G G G G G GG G GG
Sbjct: 222 GAGGGGGLGGGAGGGHGGGGGLGGGAGGGAGVGGGAGGGAGAGGGLGAGGGAGGGGGIGG 281
Query: 1332 XXXGXGXXXXXXWGXXGXXXXXXXGXGXGXGXXGXXXXXXXGXGXXGXXGXXXXGRXXXX 1153
G G G G G G G G G G G G
Sbjct: 282 GAGGGAGAGGGFGGGKGGGFGGGGGGGGGAGAGGGFGGGKGGGFGGGFGGGKGGGVGGGA 341
Query: 1152 XXXXXXGXXAXXXXXFXXG-GGXVRXGXGG 1066
G A F G GG G GG
Sbjct: 342 GGGFGGGGGAGAGGGFGGGKGGGFGGGVGG 371
>10_08_0213 - 15912048-15912716
Length = 222
Score = 31.5 bits (68), Expect = 1.8
Identities = 21/85 (24%), Positives = 23/85 (27%)
Frame = -2
Query: 1323 GXGXXXXXXWGXXGXXXXXXXGXGXGXGXXGXXXXXXXGXGXXGXXGXXXXGRXXXXXXX 1144
G G +G G G G G G G G G G G G
Sbjct: 42 GGGSGGGGGYGGSGYGSGSGYGEGGGAGAGGYGHGGGGGGGG-GEGGGSGSGYGSGQGSG 100
Query: 1143 XXXGXXAXXXXXFXXGGGXVRXGXG 1069
G A + GGG G G
Sbjct: 101 SGYGSGAFGAGGYGSGGGGGGGGAG 125
Score = 31.1 bits (67), Expect = 2.4
Identities = 23/107 (21%), Positives = 24/107 (22%)
Frame = -2
Query: 1386 GXXXXXGGXXXXXXXXXXXXXGXGXXXXXXWGXXGXXXXXXXGXGXGXGXXGXXXXXXXG 1207
G GG G G G G G G G G G G
Sbjct: 46 GGGGGYGGSGYGSGSGYGEGGGAGAGGYGHGGGGGGGGGEGGGSGSGYGS-GQGSGSGYG 104
Query: 1206 XGXXGXXGXXXXGRXXXXXXXXXXGXXAXXXXXFXXGGGXVRXGXGG 1066
G G G G G + G G G GG
Sbjct: 105 SGAFGAGGYGSGGGGGGGGAGSGYGSGEGYGSGYGSGAGGASGGGGG 151
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 31.5 bits (68), Expect = 1.8
Identities = 13/47 (27%), Positives = 13/47 (27%)
Frame = +3
Query: 1194 PXXRPXPXXXXXXXXPLXXXXXXXPXSXXXPPXPTXPXXPXPPPXSP 1334
P P P P S P P P P PPP P
Sbjct: 34 PSSNSTPTSSTTPTVPPSLTTTSSPSSSPSSPPPLPPLQPTPPPLPP 80
>07_03_0627 - 20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 197 GLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINDIIAPELLSKN 355
GL +A + SGA + A+E D+ YHG V +++N +IA + S++
Sbjct: 1124 GLVKAFMDSGAKAVISSAMEPPDSQSIVYHGMEVNGSLENGKFVIADDEASES 1176
>06_01_1028 -
8022903-8023050,8023151-8023276,8023977-8024074,
8024873-8024958,8025095-8025365
Length = 242
Score = 30.7 bits (66), Expect = 3.2
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Frame = +2
Query: 497 PLYKHLADLSGNKD-IVLPVPAFNVING-GSHAGNKLAMQEFMILPTGASSFSEAMRMGS 670
PL KH+A NKD I+ P + G+ F+ G + E + G
Sbjct: 67 PLQKHVAFFDRNKDGIIYPSETYQGFRAIGAGVVLSAVGAVFINGGLGPKTIPENTKTGL 126
Query: 671 EVYHYLKKXIKEKFGLDSTAVGDEGGFAP 757
++ Y+K K K G DS G F P
Sbjct: 127 KLPIYVKNIHKGKHGSDSGVYDANGRFVP 155
>06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850
Length = 1173
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Frame = -1
Query: 442 GICSKLRFVFSPIQFEHKLI----NLSLFSH 362
G C KL+ V PI F HKL NL+LF H
Sbjct: 535 GYCQKLQCVKLPISFSHKLTAARRNLALFQH 565
>09_06_0107 + 20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +3
Query: 1266 PXSXXXPPXPTXPXXPXPPPXSPXXXXXXPXXXLXSXXXXPXXXP 1400
P + PP P P P PPP SP S P P
Sbjct: 76 PQTPPSPPPPPPPPPPPPPPLSPTPTTTSWTTNSSSISASPILPP 120
>07_03_0560 + 19479597-19480667
Length = 356
Score = 29.1 bits (62), Expect = 9.7
Identities = 31/145 (21%), Positives = 31/145 (21%), Gaps = 2/145 (1%)
Frame = -2
Query: 1494 GXXXXVXGXRXXGXGXXXXGGGXXXXXKXXXXXXXXGXXXX--XGGXXXXXXXXXXXXXG 1321
G V G G G GGG G GG G
Sbjct: 151 GAGGGVGGGSGTGGGLGGGGGGGFGGDGGGGLGGGGGKEGGFGAGGGVGGGAGGGGGMGG 210
Query: 1320 XGXXXXXXWGXXGXXXXXXXGXGXGXGXXGXXXXXXXGXGXXGXXGXXXXGRXXXXXXXX 1141
G G G G G G G G G G G G
Sbjct: 211 GGGGGFGGGGGKGGGFGAGGGMGGGAGGGGGLGGGGGGGMGGGGGGGMGGGAGGGFGGGA 270
Query: 1140 XXGXXAXXXXXFXXGGGXVRXGXGG 1066
G GGG G GG
Sbjct: 271 GGGAGQGGSGGLGGGGGGGLGGGGG 295
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,946,609
Number of Sequences: 37544
Number of extensions: 676908
Number of successful extensions: 2599
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2395
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4872885360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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