Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_E10_e461_10.seq
         (1519 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical pr...   318   9e-87
Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical pr...   318   9e-87
Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical pr...   184   1e-46
Z54238-1|CAA90992.2|  281|Caenorhabditis elegans Hypothetical pr...    29   6.5  
U97000-9|AAC47998.1|  345|Caenorhabditis elegans Seven tm recept...    29   6.5  

>Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical
           protein T21B10.2c protein.
          Length = 465

 Score =  318 bits (780), Expect = 9e-87
 Identities = 152/215 (70%), Positives = 177/215 (82%)
 Frame = +2

Query: 113 MPIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 292
           MPI  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD  K+ + GK
Sbjct: 32  MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 91

Query: 293 GVLTAIKNINDIIAPELLSKNIEVTEQREIDQLMLKLDGTENKSKLGANAILGVSLXXXX 472
           GVL A+ NIN+ IAP L++K  +VT Q++ID  M+ LDG+ENK  LGANAILGVSL    
Sbjct: 92  GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 151

Query: 473 XXXXXXDVPLYKHLADLSGNKDIVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 652
                  +PLYK++A+L+G   +VLPVPAFNVINGGSHAGNKLAMQEFMILP GASSF+E
Sbjct: 152 AGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFAE 211

Query: 653 AMRMGSEVYHYLKKXIKEKFGLDSTAVGDEGGFAP 757
           AMRMGSEVYH+LK  IK+++GLD+TAVGDEGGFAP
Sbjct: 212 AMRMGSEVYHHLKAEIKKRYGLDATAVGDEGGFAP 246



 Score = 79.4 bits (187), Expect = 6e-15
 Identities = 40/79 (50%), Positives = 48/79 (60%)
 Frame = +1

Query: 742 GWFCSNIQXNKEALYLIQDAIXQAGXXGKICIGMDXAASEFFQDGAYDLDFXNPNLYPXE 921
           G F  NIQ NKE L L+  AI +AG  GKI IGMD AASEFF+DG YDLDF NP     +
Sbjct: 242 GGFAPNIQDNKEGLDLLNTAIDKAGYTGKISIGMDVAASEFFKDGKYDLDFKNPASDSSK 301

Query: 922 YLPLEKTDXXXLGFXQRFP 978
           +L  E+       F + +P
Sbjct: 302 WLSGEQLTELYQSFIKEYP 320


>Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical
           protein T21B10.2a protein.
          Length = 434

 Score =  318 bits (780), Expect = 9e-87
 Identities = 152/215 (70%), Positives = 177/215 (82%)
 Frame = +2

Query: 113 MPIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 292
           MPI  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD  K+ + GK
Sbjct: 1   MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60

Query: 293 GVLTAIKNINDIIAPELLSKNIEVTEQREIDQLMLKLDGTENKSKLGANAILGVSLXXXX 472
           GVL A+ NIN+ IAP L++K  +VT Q++ID  M+ LDG+ENK  LGANAILGVSL    
Sbjct: 61  GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120

Query: 473 XXXXXXDVPLYKHLADLSGNKDIVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 652
                  +PLYK++A+L+G   +VLPVPAFNVINGGSHAGNKLAMQEFMILP GASSF+E
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFAE 180

Query: 653 AMRMGSEVYHYLKKXIKEKFGLDSTAVGDEGGFAP 757
           AMRMGSEVYH+LK  IK+++GLD+TAVGDEGGFAP
Sbjct: 181 AMRMGSEVYHHLKAEIKKRYGLDATAVGDEGGFAP 215



 Score = 79.4 bits (187), Expect = 6e-15
 Identities = 40/79 (50%), Positives = 48/79 (60%)
 Frame = +1

Query: 742 GWFCSNIQXNKEALYLIQDAIXQAGXXGKICIGMDXAASEFFQDGAYDLDFXNPNLYPXE 921
           G F  NIQ NKE L L+  AI +AG  GKI IGMD AASEFF+DG YDLDF NP     +
Sbjct: 211 GGFAPNIQDNKEGLDLLNTAIDKAGYTGKISIGMDVAASEFFKDGKYDLDFKNPASDSSK 270

Query: 922 YLPLEKTDXXXLGFXQRFP 978
           +L  E+       F + +P
Sbjct: 271 WLSGEQLTELYQSFIKEYP 289


>Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical
           protein T21B10.2b protein.
          Length = 337

 Score =  184 bits (448), Expect = 1e-46
 Identities = 90/143 (62%), Positives = 108/143 (75%)
 Frame = +2

Query: 113 MPIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 292
           MPI  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD  K+ + GK
Sbjct: 1   MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60

Query: 293 GVLTAIKNINDIIAPELLSKNIEVTEQREIDQLMLKLDGTENKSKLGANAILGVSLXXXX 472
           GVL A+ NIN+ IAP L++K  +VT Q++ID  M+ LDG+ENK  LGANAILGVSL    
Sbjct: 61  GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120

Query: 473 XXXXXXDVPLYKHLADLSGNKDI 541
                  +PLYK++A+L+G   I
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKI 143



 Score = 56.0 bits (129), Expect = 7e-08
 Identities = 27/59 (45%), Positives = 34/59 (57%)
 Frame = +1

Query: 802 IXQAGXXGKICIGMDXAASEFFQDGAYDLDFXNPNLYPXEYLPLEKTDXXXLGFXQRFP 978
           I +    GKI IGMD AASEFF+DG YDLDF NP     ++L  E+       F + +P
Sbjct: 134 IAELAGTGKISIGMDVAASEFFKDGKYDLDFKNPASDSSKWLSGEQLTELYQSFIKEYP 192


>Z54238-1|CAA90992.2|  281|Caenorhabditis elegans Hypothetical protein
            T28C6.1 protein.
          Length = 281

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 16/58 (27%), Positives = 16/58 (27%)
 Frame = -1

Query: 1438 GGWXXXXXKXXXXGXXXGXXXXXXRXXXGXXXXXXGXXGGGXGXXGXVGXGGXXXXXG 1265
            GGW              G      R   G      G  GGG G  G  G GG     G
Sbjct: 36   GGWGGSDASAGASAGGTGGGRGGGRGGSGGGRG--GGSGGGRGGSGGAGAGGSGSGSG 91


>U97000-9|AAC47998.1|  345|Caenorhabditis elegans Seven tm receptor
           protein 135 protein.
          Length = 345

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 11/46 (23%), Positives = 23/46 (50%)
 Frame = -1

Query: 613 FLHSQFITSMGSTINYIECWHWKYNVFVSRQICQMFVQRHIFLCCT 476
           F+HS  + +      ++ C H   + FV+  +   F+ R++ +C T
Sbjct: 79  FMHSSILNATNPLAEFLTCLHCVLSGFVASLLACQFIFRYLAVCRT 124


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,710,375
Number of Sequences: 27780
Number of extensions: 534207
Number of successful extensions: 1589
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1562
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4359137160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)