Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_E09_e453_09.seq
         (1540 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   2.3  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   9.3  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 15/56 (26%), Positives = 21/56 (37%)
 Frame = -1

Query: 577 FGKPATKNEWVKARIIQDKVKYIWTSGRLCDFKGCNRPDLLPNEVNGWFWTAELQK 410
           FG  A    WV+           W S  +CD        +  N VN W WT  +++
Sbjct: 33  FGAEANTPGWVEESFTNFDKGINWRSYVVCD--------VAYNNVNNWLWTPFIER 80


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -1

Query: 451 NEVNGWFWTAELQKLA 404
           NE+N W+W  ++  L+
Sbjct: 361 NEMNKWWWNMKISNLS 376


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,411
Number of Sequences: 438
Number of extensions: 4718
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 53950875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)