Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_E08_e445_10.seq
         (1552 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066     30   4.3  
07_03_1160 - 24430240-24431268                                         29   7.5  
04_04_1660 - 35140641-35141894                                         29   7.5  
12_02_1131 - 26358339-26360609                                         29   9.9  
11_06_0149 - 20636801-20637044,20637859-20639180                       29   9.9  
04_04_1569 - 34486005-34486303,34486386-34486928,34487382-344877...    29   9.9  

>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
          Length = 646

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 21/72 (29%), Positives = 24/72 (33%), Gaps = 8/72 (11%)
 Frame = +3

Query: 1185 VPPGXSXIRXPXX-------XG*XSXXPYXXXXPXXKPGG-PPIPXX*XPPYXXGPGPXX 1340
            VPPG   +  P          G  +  PY    P   PG   P+P    PPY   P P  
Sbjct: 391  VPPGPPAVPAPPTYPPADPAAGGYTSQPYMGAPPPPPPGSYAPVPWGQPPPYASYPPPPP 450

Query: 1341 XXXXEXSPXPXP 1376
                   P P P
Sbjct: 451  GSSMYNPPPPAP 462


>07_03_1160 - 24430240-24431268
          Length = 342

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 16/50 (32%), Positives = 18/50 (36%)
 Frame = +3

Query: 1263 PXXKPGGPPIPXX*XPPYXXGPGPXXXXXXEXSPXPXPXAXLXXXXPXXP 1412
            P  KP GPP+P    PP    P P      +  P P P        P  P
Sbjct: 110  PQPKPDGPPLPNPNQPPQ---PNPNGPPKPDMPPMPKPDGLPNTYEPSRP 156


>04_04_1660 - 35140641-35141894
          Length = 417

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +3

Query: 471 EWFFEFGYVIPNSTNTWQSVIESAPESQMMPANVLNGNVVIETKFFDGDLLITTSRVR 644
           EW  E G + PN    +  + E+A +   MP  V  GN  ++    DG +     RVR
Sbjct: 316 EWD-EAGRMPPNMYRCFTGLCEAAAQGNAMPTAVAGGNNKVKVFGGDGKVWFAGKRVR 372


>12_02_1131 - 26358339-26360609
          Length = 756

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
 Frame = +3

Query: 345 ARVPKR-ILKCRVVSRELNFSSIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTW 521
           AR+P R +L+CR +SR   +++  S D F     +L   R   +          ++ N W
Sbjct: 25  ARMPARSVLRCRCLSRA--WAAALSTDAFVDHHLLLANRRGGPKLCIPPRSASADTINAW 82

Query: 522 QSVIESAPESQMMPANVLNGNVVIETKFFDGDLLITTSRVRLFYI 656
               E+      +P    NG ++   +   G LL+     RL+++
Sbjct: 83  SPEAETTTPLMAVPHGTRNGRIIPYGRPCRGLLLLHAIFARLYFV 127


>11_06_0149 - 20636801-20637044,20637859-20639180
          Length = 521

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 492 YVIPNSTNTWQSVIESAPESQMMPANVL 575
           +V PNST+ W +VI+ A +  M P  V+
Sbjct: 340 HVDPNSTSAWNAVIKGAKKWVMFPPEVV 367


>04_04_1569 -
           34486005-34486303,34486386-34486928,34487382-34487766,
           34488450-34488650,34488739-34488951,34489210-34489446
          Length = 625

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 261 WLNLRDADSGKILWQYNEDMSNP 329
           W+ + D DS  + W+  EDMS P
Sbjct: 148 WVQVGDGDSDHLCWERAEDMSTP 170


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,307,302
Number of Sequences: 37544
Number of extensions: 532698
Number of successful extensions: 983
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 5000508548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)