Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_E08_e445_10.seq
(1552 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14635-12|AAC46655.1| 159|Caenorhabditis elegans Phosphodiester... 219 3e-57
Z73428-1|CAA97807.1| 219|Caenorhabditis elegans Hypothetical pr... 44 3e-04
U32854-1|AAC46919.1| 219|Caenorhabditis elegans unc-119 protein. 44 3e-04
Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical p... 31 2.9
Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical pr... 31 2.9
U88169-13|AAO12405.1| 148|Caenorhabditis elegans Hypothetical p... 31 2.9
U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical pr... 30 5.1
U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical pr... 30 5.1
U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical pr... 30 5.1
Z69635-2|CAA93462.1| 555|Caenorhabditis elegans Hypothetical pr... 29 8.9
Z69635-1|CAA93459.1| 515|Caenorhabditis elegans Hypothetical pr... 29 8.9
>U14635-12|AAC46655.1| 159|Caenorhabditis elegans Phosphodiesterase
delta-like protein1 protein.
Length = 159
Score = 219 bits (536), Expect = 3e-57
Identities = 91/144 (63%), Positives = 126/144 (87%)
Frame = +3
Query: 222 DRVETILKGFQINWLNLRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRELNF 401
++ E+IL GF++NW+NLRDA++GK+LWQ EDM++P+ EH+A VPK +LKCR VSRE+NF
Sbjct: 15 EKAESILAGFKLNWMNLRDAETGKVLWQSTEDMADPKREHKAHVPKNLLKCRTVSREINF 74
Query: 402 SSIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESAPESQMMPANVLNG 581
+S +++FRLEQ+V KG +EEW+F+FG+VIP+STNTWQ++IE+APESQM P +VL+G
Sbjct: 75 TSSVKIEKFRLEQRVYLKGTIIEEWYFDFGFVIPDSTNTWQNMIEAAPESQMFPPSVLSG 134
Query: 582 NVVIETKFFDGDLLITTSRVRLFY 653
NVV+ET F+DGDLL++TSRVRL+Y
Sbjct: 135 NVVVETLFYDGDLLVSTSRVRLYY 158
>Z73428-1|CAA97807.1| 219|Caenorhabditis elegans Hypothetical
protein M142.1 protein.
Length = 219
Score = 44.0 bits (99), Expect = 3e-04
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Frame = +3
Query: 270 LRDADSGKILWQY----NEDMSNPEVEHEA------RVPKRILKCRVVSRELNFSSIE-S 416
+RD D+ +L++ NE N + + E+ R LK + V + F +
Sbjct: 77 IRDLDTEHVLFEIAKPENETEENLQAQAESARYVRYRFAPNFLKLKTVGATVEFKVGDVP 136
Query: 417 MDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESAPESQMMPANVLN 578
+ FR+ ++ FK R L+ + FEFG+ +PNS N + + E SQ + +++N
Sbjct: 137 ITHFRMIERHFFKDRLLKCFDFEFGFCMPNSRNNCEHIYEFPQLSQQLMDDMIN 190
>U32854-1|AAC46919.1| 219|Caenorhabditis elegans unc-119 protein.
Length = 219
Score = 44.0 bits (99), Expect = 3e-04
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Frame = +3
Query: 270 LRDADSGKILWQY----NEDMSNPEVEHEA------RVPKRILKCRVVSRELNFSSIE-S 416
+RD D+ +L++ NE N + + E+ R LK + V + F +
Sbjct: 77 IRDLDTEHVLFEIAKPENETEENLQAQAESARYVRYRFAPNFLKLKTVGATVEFKVGDVP 136
Query: 417 MDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSVIESAPESQMMPANVLN 578
+ FR+ ++ FK R L+ + FEFG+ +PNS N + + E SQ + +++N
Sbjct: 137 ITHFRMIERHFFKDRLLKCFDFEFGFCMPNSRNNCEHIYEFPQLSQQLMDDMIN 190
>Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical
protein M01E5.6 protein.
Length = 702
Score = 30.7 bits (66), Expect = 2.9
Identities = 24/92 (26%), Positives = 44/92 (47%)
Frame = +3
Query: 351 VPKRILKCRVVSRELNFSSIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSV 530
+P + L C+ + E + S ++ LE VLF + +F Y T+ + V
Sbjct: 53 IPHKCLICQPILTEKHISPYYAVYSDLLEDFVLFGYNTMTGKMEQFIYAF--KTDCFVEV 110
Query: 531 IESAPESQMMPANVLNGNVVIETKFFDGDLLI 626
+ PE + PA ++ GNVV+ +G+L++
Sbjct: 111 --NRPEIKYNPAFLVKGNVVVALNGPEGELVV 140
>Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical
protein M01E5.6 protein.
Length = 702
Score = 30.7 bits (66), Expect = 2.9
Identities = 24/92 (26%), Positives = 44/92 (47%)
Frame = +3
Query: 351 VPKRILKCRVVSRELNFSSIESMDRFRLEQKVLFKGRCLEEWFFEFGYVIPNSTNTWQSV 530
+P + L C+ + E + S ++ LE VLF + +F Y T+ + V
Sbjct: 53 IPHKCLICQPILTEKHISPYYAVYSDLLEDFVLFGYNTMTGKMEQFIYAF--KTDCFVEV 110
Query: 531 IESAPESQMMPANVLNGNVVIETKFFDGDLLI 626
+ PE + PA ++ GNVV+ +G+L++
Sbjct: 111 --NRPEIKYNPAFLVKGNVVVALNGPEGELVV 140
>U88169-13|AAO12405.1| 148|Caenorhabditis elegans Hypothetical
protein T03F1.12 protein.
Length = 148
Score = 30.7 bits (66), Expect = 2.9
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 268 FNQFIWKPLRMVSTRSCLAS--SAGKTSVMM 182
F QF+W P+ +VS +CL + A +TSVM+
Sbjct: 4 FRQFVWDPVLLVSQMTCLQTFFYATQTSVML 34
>U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical
protein R57.1b protein.
Length = 576
Score = 29.9 bits (64), Expect = 5.1
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 288 GKILWQYNEDMSNPEVEHEARVPKRI-LKCRVVSR-ELNFSSIESMDRFRLEQKVLFKGR 461
G IL+ +D++ VE E PK+I + V R L +++ + +K LFKGR
Sbjct: 212 GAILFSDTQDVAQDGVESENVYPKKIWMPNEGVQRGSLMHGDGDALSPYYPSKKELFKGR 271
Query: 462 CLEE 473
+EE
Sbjct: 272 TIEE 275
>U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical
protein R57.1c protein.
Length = 751
Score = 29.9 bits (64), Expect = 5.1
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 288 GKILWQYNEDMSNPEVEHEARVPKRI-LKCRVVSR-ELNFSSIESMDRFRLEQKVLFKGR 461
G IL+ +D++ VE E PK+I + V R L +++ + +K LFKGR
Sbjct: 212 GAILFSDTQDVAQDGVESENVYPKKIWMPNEGVQRGSLMHGDGDALSPYYPSKKELFKGR 271
Query: 462 CLEE 473
+EE
Sbjct: 272 TIEE 275
>U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical
protein R57.1a protein.
Length = 770
Score = 29.9 bits (64), Expect = 5.1
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 288 GKILWQYNEDMSNPEVEHEARVPKRI-LKCRVVSR-ELNFSSIESMDRFRLEQKVLFKGR 461
G IL+ +D++ VE E PK+I + V R L +++ + +K LFKGR
Sbjct: 231 GAILFSDTQDVAQDGVESENVYPKKIWMPNEGVQRGSLMHGDGDALSPYYPSKKELFKGR 290
Query: 462 CLEE 473
+EE
Sbjct: 291 TIEE 294
>Z69635-2|CAA93462.1| 555|Caenorhabditis elegans Hypothetical
protein F19B6.1b protein.
Length = 555
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 270 LRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVV 383
++D GKIL Q NE +PE+ H R+P I + +V+
Sbjct: 425 VKDCVIGKILIQTNETTFDPEL-HYIRLPPHITRYKVI 461
>Z69635-1|CAA93459.1| 515|Caenorhabditis elegans Hypothetical
protein F19B6.1a protein.
Length = 515
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 270 LRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVV 383
++D GKIL Q NE +PE+ H R+P I + +V+
Sbjct: 385 VKDCVIGKILIQTNETTFDPEL-HYIRLPPHITRYKVI 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,180,021
Number of Sequences: 27780
Number of extensions: 492146
Number of successful extensions: 1030
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4473305038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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