BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030905E5_E08_e445_10.seq (1552 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 27 0.43 DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 24 3.1 AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 24 3.1 DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 24 4.1 DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 24 4.1 DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 7.1 DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 7.1 DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 7.1 U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor... 23 9.4 DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 9.4 DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 9.4 DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 23 9.4 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 9.4 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 27.1 bits (57), Expect = 0.43 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = -2 Query: 105 LYKHKMYKWPSCRIXC 58 LY H + KWP C + C Sbjct: 277 LYGHGVCKWPGCEVIC 292 Score = 23.0 bits (47), Expect = 7.1 Identities = 12/50 (24%), Positives = 22/50 (44%) Frame = +3 Query: 288 GKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRELNFSSIESMDRFRLE 437 G +W+ ++ PE + VPK + V SR + + +D L+ Sbjct: 219 GLPMWK-SDTSDGPESHQNSNVPKSVAGLNVSSRRSDMNGTTPLDEKPLD 267 >DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor protein. Length = 459 Score = 24.2 bits (50), Expect = 3.1 Identities = 10/33 (30%), Positives = 21/33 (63%) Frame = +1 Query: 643 DYFTYNLFPSNIMHLLVCII*SLYAFFQKYKCQ 741 +Y+ +NL S+++ L++ + L F+Q+Y Q Sbjct: 69 NYYLFNLAVSDLLFLILGLPFELSVFWQQYPWQ 101 >AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 24.2 bits (50), Expect = 3.1 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = -1 Query: 937 NXXPHNNXXXNSYQKXFN*NILNLE 863 N HNN +Y K NI+N+E Sbjct: 320 NKTIHNNNNYKNYNKKLYYNIINIE 344 >DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 510 Score = 23.8 bits (49), Expect = 4.1 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = -2 Query: 870 IWKXXGYFLNGKCMYIR*ILI 808 IW+ YF NGK Y+ I + Sbjct: 117 IWRPDTYFYNGKHSYVHTITV 137 >DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel protein. Length = 463 Score = 23.8 bits (49), Expect = 4.1 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = -2 Query: 870 IWKXXGYFLNGKCMYI 823 IWK YF NGK Y+ Sbjct: 85 IWKPDTYFYNGKHSYL 100 >DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 23.0 bits (47), Expect = 7.1 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -1 Query: 925 HNNXXXNSYQKXFN*NILNLE 863 +NN N+Y K NI+N+E Sbjct: 100 NNNYNNNNYNKKLYYNIINIE 120 >DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 23.0 bits (47), Expect = 7.1 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -1 Query: 925 HNNXXXNSYQKXFN*NILNLE 863 +NN N+Y K NI+N+E Sbjct: 100 NNNYNNNNYNKKLYYNIINIE 120 >DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 23.0 bits (47), Expect = 7.1 Identities = 8/21 (38%), Positives = 12/21 (57%) Frame = -1 Query: 949 KXXHNXXPHNNXXXNSYQKXF 887 K HN +NN N+Y+K + Sbjct: 88 KTIHNNNNYNNNNYNNYKKLY 108 >U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor protein. Length = 129 Score = 22.6 bits (46), Expect = 9.4 Identities = 11/34 (32%), Positives = 16/34 (47%) Frame = +3 Query: 480 FEFGYVIPNSTNTWQSVIESAPESQMMPANVLNG 581 FEFG N QS ++ P ++ P +NG Sbjct: 92 FEFGKEYKNGFIKGQSEVQRGPGGRLSPYFGING 125 >DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 22.6 bits (46), Expect = 9.4 Identities = 8/21 (38%), Positives = 14/21 (66%) Frame = -1 Query: 925 HNNXXXNSYQKXFN*NILNLE 863 +NN N+Y+K + I+N+E Sbjct: 105 YNNNYNNNYKKLYKNYIINIE 125 >DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 22.6 bits (46), Expect = 9.4 Identities = 8/21 (38%), Positives = 14/21 (66%) Frame = -1 Query: 925 HNNXXXNSYQKXFN*NILNLE 863 +NN N+Y+K + I+N+E Sbjct: 105 YNNNYNNNYKKLYKNYIINIE 125 >DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein protein. Length = 430 Score = 22.6 bits (46), Expect = 9.4 Identities = 8/27 (29%), Positives = 15/27 (55%) Frame = +3 Query: 486 FGYVIPNSTNTWQSVIESAPESQMMPA 566 F + N+ W S++ +PE+Q + A Sbjct: 330 FNLIDQNAVGCWNSLLPYSPENQAVVA 356 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 22.6 bits (46), Expect = 9.4 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +3 Query: 678 HAFTSLYNLEFICILSKI 731 + FT+L N F+C+ S I Sbjct: 5 YVFTTLINAAFLCLASTI 22 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 317,755 Number of Sequences: 438 Number of extensions: 6517 Number of successful extensions: 31 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 31 length of database: 146,343 effective HSP length: 61 effective length of database: 119,625 effective search space used: 54429375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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