Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_E07_e437_09.seq
(1499 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 52 2e-07
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 40 7e-04
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 39 0.002
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 0.002
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 37 0.008
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 36 0.014
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 34 0.058
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 33 0.077
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 33 0.077
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 33 0.10
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.18
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.24
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.41
SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion cytoch... 31 0.54
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.72
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.72
SPBC2F12.11c |rep2||transcriptional activator Rep2|Schizosacchar... 30 0.95
SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion ... 29 2.2
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 24 2.4
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 2.9
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 28 2.9
SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 3.8
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 27 8.9
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 27 8.9
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 52.0 bits (119), Expect = 2e-07
Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Frame = +1
Query: 517 TKSSLKNHRHRNHSTRGVERKKRPRVTVSSFQCPDCTKRFKHKHSLDKH-RDTHL-EKTH 690
T S+K + R S R + P SF CP+C+K+FK L +H R H EK
Sbjct: 395 TDGSMKRRKRRQPSNRKTSVPRSPGG--KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPF 452
Query: 691 PCAECPKKFGSQVLLXMHMKSHERVLRGPTFRCPYXGKGYYEA 819
C C K+F + L H + H V P C + GYY +
Sbjct: 453 VCI-CGKRFSRRDNLRQHERLH--VNASPRLACFFQPSGYYSS 492
Score = 29.1 bits (62), Expect = 1.7
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Frame = +1
Query: 424 RKEARIIEKMKSEEETKP--KIFSCKDCDKIFNTKSSLKNHRHRNHSTRGVERKKRPRVT 597
R++ R K+ P K F C +C K F L+ H R + ++P V
Sbjct: 401 RRKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRH------IRSLHTSEKPFVC 454
Query: 598 VSSFQCPDCTKRFKHKHSLDKHRDTHL 678
+ C KRF + +L +H H+
Sbjct: 455 I-------CGKRFSRRDNLRQHERLHV 474
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 40.3 bits (90), Expect = 7e-04
Identities = 25/89 (28%), Positives = 25/89 (28%), Gaps = 1/89 (1%)
Frame = +2
Query: 1058 PPPPXIXXXXPXPXPPXPXXXXXPPXXXPPPXSXXPPPFXLPXXFFXXXXPSXX-PXPPX 1234
PP P I P PP P P PPP P P PS P PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS---APSLPSAVPPMPPK 200
Query: 1235 XXPPXXXXXPXXXXXXXPXPXXPXPXXXP 1321
PP P P P P
Sbjct: 201 VPPPPLSQAPVANTSSRPSSFAPPAGHAP 229
Score = 36.7 bits (81), Expect = 0.008
Identities = 28/105 (26%), Positives = 28/105 (26%), Gaps = 1/105 (0%)
Frame = +2
Query: 1058 PPPPXIXXXXPXPXPPXPXXXXXPPXXXPPPXSXXPP-PFXLPXXFFXXXXPSXXPXPPX 1234
PP P P PP P P PP S PP P LP P P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP--------PPAQPAAPV 181
Query: 1235 XXPPXXXXXPXXXXXXXPXPXXPXPXXXPPXXXXXXXXPXXRXPP 1369
PP P P P P P PP
Sbjct: 182 KSPPSAPSLPSAVPPM--PPKVPPPPLSQAPVANTSSRPSSFAPP 224
Score = 34.3 bits (75), Expect = 0.044
Identities = 21/77 (27%), Positives = 21/77 (27%)
Frame = +2
Query: 1094 PXPPXPXXXXXPPXXXPPPXSXXPPPFXLPXXFFXXXXPSXXPXPPXXXPPXXXXXPXXX 1273
P PP P PP PP S PP P PP P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP-PS 186
Query: 1274 XXXXPXPXXPXPXXXPP 1324
P P P PP
Sbjct: 187 APSLPSAVPPMPPKVPP 203
Score = 32.3 bits (70), Expect = 0.18
Identities = 16/54 (29%), Positives = 18/54 (33%)
Frame = +3
Query: 1140 PXXPXPSXPPXSXSPXSFSXXXXPPXPPPPPXAXXPXXXXXPXXXXXXPPXPXP 1301
P P P P P + S P PPP P + P P PP P
Sbjct: 125 PSAPAPPTPQSELRPPT-SAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 31.5 bits (68), Expect = 0.31
Identities = 26/111 (23%), Positives = 31/111 (27%), Gaps = 3/111 (2%)
Frame = +3
Query: 966 AXPPXXXATXXERAXAPXPXXRPLXIXXXXXPPPPXXXXXPXXXXPXPXXXXXXXXXVPX 1145
A PP A ++ P P PPP P P P +P
Sbjct: 122 AAPPSAPAPPTPQSELRPPTSAP---PRPSIPPP-----SPASAPPIPSKAPPIPSSLPP 173
Query: 1146 XPXPSXPPXSXSPXSFSXXXXPPXP---PPPPXAXXPXXXXXPXXXXXXPP 1289
P+ P S PP P PPPP + P PP
Sbjct: 174 PAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/51 (27%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +3
Query: 1158 SXPPXSXSPXSFSXXXXPPXPPPP-PXAXXPXXXXXPXXXXXXPPXPXPXP 1307
+ PP + +P + PP PP P P P PP P P
Sbjct: 122 AAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP 172
Score = 27.1 bits (57), Expect = 6.7
Identities = 21/91 (23%), Positives = 21/91 (23%)
Frame = +2
Query: 1049 PXXPPPPXIXXXXPXPXPPXPXXXXXPPXXXPPPXSXXPPPFXLPXXFFXXXXPSXXPXP 1228
P PPP P PP P P P PPP PS P
Sbjct: 168 PSSLPPPA-QPAAPVKSPPS--APSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Query: 1229 PXXXPPXXXXXPXXXXXXXPXPXXPXPXXXP 1321
P P P P P
Sbjct: 225 AGHAPNVTSESPKFPNRGPSIPSASVPPVPP 255
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 39.1 bits (87), Expect = 0.002
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
Frame = +1
Query: 448 KMKSEEETKPK-IFSCKDCDKIFNTKSSLKNHRHRNHSTRGVERKKRPRVTVSSFQCPDC 624
K KSE +++ + + C+K F +LK+H + + + R FQC C
Sbjct: 559 KAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYR-------------PFQCSIC 605
Query: 625 TKRFKHKHSLDKHRDTHLE-KTHPCAECPKKFGSQVLLXMHMKSH--ERVLRGPTFR 786
K F +H +H H K C C ++F L H KS + LR T R
Sbjct: 606 KKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVGQNCLRTATER 662
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.7 bits (86), Expect = 0.002
Identities = 30/125 (24%), Positives = 33/125 (26%), Gaps = 11/125 (8%)
Frame = +3
Query: 966 AXPPXXXATXXERAXAPXPXXRPLXIXXXXXPPPPXXXXXPXXXXPXPXXXXXXXXXVPX 1145
A PP + P P + PPP P VP
Sbjct: 360 APPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPT 419
Query: 1146 XPX------PSXPPXSXSPXSFSXXXXPPXPP-----PPPXAXXPXXXXXPXXXXXXPPX 1292
P PS PP + PP PP PP A P P PP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 1293 PXPXP 1307
P P P
Sbjct: 480 PAPAP 484
Score = 36.7 bits (81), Expect = 0.008
Identities = 26/94 (27%), Positives = 26/94 (27%), Gaps = 2/94 (2%)
Frame = +2
Query: 1049 PXXPPPPXIXXXXPXPXPPXPXXXXXPPXXXPPPXSXXPPPFXLPXXFFXXXXPSXXPXP 1228
P PPPP P P P PP PPP P P S P P
Sbjct: 337 PPPPPPPRSNAAGSIPLP--PQGRSAPP---PPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Query: 1229 PXXXPPXXXXX--PXXXXXXXPXPXXPXPXXXPP 1324
P P P P P P PP
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP 425
Score = 33.5 bits (73), Expect = 0.077
Identities = 27/109 (24%), Positives = 31/109 (28%), Gaps = 11/109 (10%)
Frame = +3
Query: 1032 PLXIXXXXXPPPPXXXXXPXXXXPXPXXXXXXXXXVPXXPXPSXP----PXSXSPXSFSX 1199
PL PPPP P P P P P+ P P + S
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASR 411
Query: 1200 XXXPPXPPPP--PXAXXPXX-----XXXPXXXXXXPPXPXPXPLXXXXP 1325
PP P PP P + P P PP P P+ P
Sbjct: 412 TSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/58 (24%), Positives = 17/58 (29%)
Frame = +3
Query: 1059 PPPPXXXXXPXXXXPXPXXXXXXXXXVPXXPXPSXPPXSXSPXSFSXXXXPPXPPPPP 1232
PP P P P + P PP S + + PPPPP
Sbjct: 258 PPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPP 315
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = +3
Query: 1140 PXXPXPSXPPXSXSPXS--FSXXXXPPXPPPPPXAXXPXXXXXPXXXXXXPPXPXP 1301
P P PS P S PP PPPPP + P PP P P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPP-PPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.5 bits (58), Expect = 5.1
Identities = 29/146 (19%), Positives = 34/146 (23%), Gaps = 1/146 (0%)
Frame = +3
Query: 999 ERAXAPXPXXRPLXIXXXXXPPPPXXXXXPXXXXPXPXXXXXXXXXVPXXPXPSXPPXSX 1178
E A P P PP P P P P P+ PP
Sbjct: 219 ESAGTPTSTSAPPIPPSIPSSRPPERV--PSLSAPAPPPIPPPSNGTVSSP-PNSPPRPI 275
Query: 1179 SPXSFSXXXXPPXPPP-PPXAXXPXXXXXPXXXXXXPPXPXPXPLXXXXPXXXXXXXXXX 1355
+P S + PP PP + PP P P P
Sbjct: 276 APVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSS 335
Query: 1356 XVXXXXXPXXXSXXSXPXXPPXXXXP 1433
P + S P P P
Sbjct: 336 LPPPPPPPRSNAAGSIPLPPQGRSAP 361
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 36.7 bits (81), Expect = 0.008
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Frame = +1
Query: 493 KDCDKIFNTKSSLKNHRHRNHSTRGVERKKRPRVTVSSFQCP--DCT--KRFKHKHSLDK 660
+DC+ F TK L+NH +R H + S+ CP C + F+ L
Sbjct: 149 QDCELRFATKQKLQNHVNRAHE------------KIISYSCPHESCVGHEGFEKWSQLQN 196
Query: 661 H-RDTHLEKTHPCAECPKKFGSQVLLXMHMKSHERVL-RGPTFRCPYXG 801
H R+ H+ C+ C ++F + L H+ H+ L T+ CP G
Sbjct: 197 HIREAHVPS---CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEG 242
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 691 PCAECPKKFGSQVLLXMHMKSHERVLRGPTFRCPYXG--KGYY 813
P EC KK+ LL H+++H P F C Y G K +Y
Sbjct: 26 PYEECGKKYSRPSLLEQHLRTHSN--ERP-FVCDYTGCSKAFY 65
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/67 (28%), Positives = 25/67 (37%)
Frame = +1
Query: 463 EETKPKIFSCKDCDKIFNTKSSLKNHRHRNHSTRGVERKKRPRVTVSSFQCPDCTKRFKH 642
EE K + C K F S+LK H H +F C C +F +
Sbjct: 231 EERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN------------MAFHCDSCGTKFGY 278
Query: 643 KHSLDKH 663
KH L +H
Sbjct: 279 KHMLQRH 285
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 35.9 bits (79), Expect = 0.014
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 607 FQCPDCTKRFKHKHSLDKHRDTHL-EKTHPCA--ECPKKFGSQVLLXMHMKSH 756
++CP CTK F +H TH EK H C C K+F L H + H
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 33.9 bits (74), Expect = 0.058
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 607 FQCPDCTKRFKHKHSLDKHRDTHLE-KTHPCAECPKKFGSQVLLXMHMK 750
F C C KRF +L +H+ H + + PC C K + LL H++
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQ 79
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 33.5 bits (73), Expect = 0.077
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 598 VSSFQCPDCTKRFKHKHSLDKHRDTHL-EKTHPCA--ECPKKFGSQVLLXMHMKSHER 762
+ S++CP C + F + +H +H EK C+ C K+F + L H+++H R
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLR 58
Score = 31.1 bits (67), Expect = 0.41
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +1
Query: 478 KIFSCKDCDKIFNTKSSLKNHRHRNHSTRGVERKKRPRVTVSSFQC--PDCTKRFKHKHS 651
K + C C ++F HR + H R + R F+C P C KRF +
Sbjct: 2 KSYECPFCKRVF--------HR-QEHQVRHI----RSHTGEKPFECSYPSCKKRFTRRDE 48
Query: 652 LDKHRDTHLEK 684
L +H THL K
Sbjct: 49 LIRHVRTHLRK 59
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 33.5 bits (73), Expect = 0.077
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Frame = +1
Query: 472 KPKIFSCKDCDKIFNTKSSLKNHRHRNHSTRGVERKKRPR------VTVSSFQCPDCTKR 633
KP +CDK + ++ LK H+ H + P V ++C C+KR
Sbjct: 348 KPYKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPAPIPHQGFVVENKPYRCEVCSKR 407
Query: 634 FKHKHSLDKHR-DTHLE 681
+K+ + L HR +HL+
Sbjct: 408 YKNLNGLKYHRTHSHLQ 424
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 33.1 bits (72), Expect = 0.10
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 622 CTKRFKHKHSLDKHRDTHL-EKTHPCAECPKKFGSQVLLXMHMKSHE 759
C KR K++++ H THL ++ + C C F L H++ HE
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHE 496
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/59 (25%), Positives = 22/59 (37%)
Frame = +1
Query: 568 VERKKRPRVTVSSFQCPDCTKRFKHKHSLDKHRDTHLEKTHPCAECPKKFGSQVLLXMH 744
VE + ++ ++C C F H L +H H EC K+F L H
Sbjct: 460 VESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCECLKRFNRLDALNRH 518
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.18
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 1031 APXXXXPXXPPPPXIXXXXPXPXPPXPXXXXXPPXXXPPPXSXXPPP 1171
AP PPPP + P PP P PP PPP P
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAPPMP---AGPPSAPPPPLPASSAP 1741
Score = 31.1 bits (67), Expect = 0.41
Identities = 21/74 (28%), Positives = 22/74 (29%), Gaps = 1/74 (1%)
Frame = +3
Query: 1011 APXPXXRPLXIXXXXXPPPPXXXXXPXX-XXPXPXXXXXXXXXVPXXPXPSXPPXSXSPX 1187
AP P P PP P P P P P P+ P S P
Sbjct: 1469 APAPSSAP-------APPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPP 1521
Query: 1188 SFSXXXXPPXPPPP 1229
S S P P PP
Sbjct: 1522 SQSSFAHVPSPAPP 1535
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/56 (28%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = +3
Query: 1140 PXXPXPSXPPXSXSPXSFSXXXXPPXPP--PPPXAXXPXXXXXPXXXXXXPPXPXP 1301
P P + PP +P P PP PP A P P P P P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Frame = +2
Query: 1049 PXXPPPPXIXXXXPXPXPPXPXXXXXPPXXXPP----PXSXXPPP 1171
P PP + P PP P PP PP P S PPP
Sbjct: 1694 PQSAAPPQMSA----PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 8.9
Identities = 18/64 (28%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = +3
Query: 1140 PXXPXPSXP--PXSXSPXSFSXXXXPPXPPPPPXAXXPXXXXXPXXXXXXPPXPXPXPLX 1313
P P + P P S +P S P PPP P P PP P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPT--PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSA 1740
Query: 1314 XXXP 1325
P
Sbjct: 1741 PSVP 1744
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.24
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +2
Query: 1049 PXXPPPPXIXXXXPXPXPPXPXXXXXPPXXXPPPXSXXPPPFXLPXXFFXXXXPSXXPXP 1228
P PPP P P PP P P PPP PP + P P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP----PPAVSAGGSRYYAPAPQAEPEP 803
Score = 31.5 bits (68), Expect = 0.31
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +3
Query: 1059 PPPPXXXXXPXXXXPXPXXXXXXXXXVPXXPXPSXPPXSXSPXSFSXXXXPPXPPPPP 1232
PPPP P P P P P PP P + PP PPPPP
Sbjct: 733 PPPPPAVIVPTPA-PAPIPVP------PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/63 (25%), Positives = 19/63 (30%)
Frame = +3
Query: 1137 VPXXPXPSXPPXSXSPXSFSXXXXPPXPPPPPXAXXPXXXXXPXXXXXXPPXPXPXPLXX 1316
+ P P P S + PPPPP P P P P P P+
Sbjct: 706 ISSSPSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPI------PVPPPAPIMG 759
Query: 1317 XXP 1325
P
Sbjct: 760 GPP 762
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +2
Query: 1031 APXXXXP-XXPPPPXIXXXXPXPXPPXP 1111
AP P PPPP + P P PP P
Sbjct: 755 APIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.1 bits (67), Expect = 0.41
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = -3
Query: 1230 GGXGXXEGXXXXKKXXGXXXGGGXXEXGGGXXXGGXXXXXGXGGXGXGXXXXXXGGGGXX 1051
GG G G GGG GG G G GG G G GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Query: 1050 G 1048
G
Sbjct: 69 G 69
Score = 26.6 bits (56), Expect = 8.9
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = -3
Query: 1263 GXXXXXGGXXXGGXGXXEGXXXXKKXXGXXXGGGXXEXGGGXXXGGXXXXXGXGGXGXGX 1084
G GG G G G G GGG GG GG G G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG--RGGRGGARGGRGGSSGG 63
Query: 1083 XXXXXGG 1063
GG
Sbjct: 64 RGGAKGG 70
Score = 26.6 bits (56), Expect = 8.9
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = -3
Query: 1308 GXGXXGXGXXXXXXXGXXXXXGGXXXGGXGXXEGXXXXKKXXGXXXGGGXXEXGGGXXXG 1129
G G G G GG GG G G + G G G G G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGR--GGARGGRGGSSGGRGGAKG 69
Query: 1128 G 1126
G
Sbjct: 70 G 70
>SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion
cytochrome c oxidase assembly protein Cox1101,
mitochondrial ribosomal protein
Rsm22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 30.7 bits (66), Expect = 0.54
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 427 KEARIIEKMKSEEETKPKIFSCKDCDKIFNTKSSLKNHRHRNHSTRGVERKKRPRVTVSS 606
K+A + KPK+ D IF K +RH+ S R +S
Sbjct: 482 KDASSTYSINPPSYNKPKVERNTTADPIFVGKRFYSTNRHKAFSRFADFNSHRFPCIFTS 541
Query: 607 FQCPDC---TKRFKHKHSLDK 660
F C +C T+++ ++S DK
Sbjct: 542 FSCYNCISGTRKYSRQYSRDK 562
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.72
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +3
Query: 1149 PXPSX-PPXSXSPX-SFSXXXXPPXPPPPPXA 1238
P PS PP + +P S PP PPPPP A
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPA 198
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/79 (24%), Positives = 22/79 (27%)
Frame = +2
Query: 896 FRPKFXSXGAXPXXPRXXXPPGLRXPPXXXGDXXXXXXXXXXXXXAPXXXXPXXPPPPXI 1075
F+P + A P PP PP D + P PP
Sbjct: 171 FQPPSAAAPAT-SLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTP 229
Query: 1076 XXXXPXPXPPXPXXXXXPP 1132
P P PP P PP
Sbjct: 230 KQADPLPAPPPPPPPTLPP 248
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.72
Identities = 23/95 (24%), Positives = 26/95 (27%), Gaps = 5/95 (5%)
Frame = +3
Query: 1032 PLXIXXXXXPPPPXXXXXPXXXXPXPXXXX-XXXXXVPXXPXPSXPPXSXSPXSFSXXXX 1208
P+ + PP P P P P P P P S P +
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA 1082
Query: 1209 PPXPPPP--PXAXXPXXXX--XPXXXXXXPPXPXP 1301
PP P P P P P PP P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Score = 29.9 bits (64), Expect = 0.95
Identities = 28/135 (20%), Positives = 32/135 (23%)
Frame = +2
Query: 920 GAXPXXPRXXXPPGLRXPPXXXGDXXXXXXXXXXXXXAPXXXXPXXPPPPXIXXXXPXPX 1099
G PR PP + PP + P P P
Sbjct: 955 GRKASGPRPAAPPSIP-PPLPVSNILSSPTSEPPKDHPPSA--PLSKPVSTSPAAPLARV 1011
Query: 1100 PPXPXXXXXPPXXXPPPXSXXPPPFXLPXXFFXXXXPSXXPXPPXXXPPXXXXXPXXXXX 1279
PP P P P S PP +P P+ P P P
Sbjct: 1012 PPVPKLSSKAPPVPLP--SADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Query: 1280 XXPXPXXPXPXXXPP 1324
P P P PP
Sbjct: 1070 SSEIPSIPAPSGAPP 1084
Score = 29.1 bits (62), Expect = 1.7
Identities = 25/114 (21%), Positives = 27/114 (23%), Gaps = 2/114 (1%)
Frame = +3
Query: 966 AXPPXXXATXXERAXAPXPXXRPLXIXXXXXPPPPXXXXXPXXXXPXPXX--XXXXXXXV 1139
A PP + P P+ P P P P V
Sbjct: 1129 AAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGV 1188
Query: 1140 PXXPXPSXPPXSXSPXSFSXXXXPPXPPPPPXAXXPXXXXXPXXXXXXPPXPXP 1301
P P PS P P PP PP P PP P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 27.1 bits (57), Expect = 6.7
Identities = 23/102 (22%), Positives = 24/102 (23%), Gaps = 6/102 (5%)
Frame = +3
Query: 1014 PXPXXRPLXIXXXXXPP-PPXXXXXPXXXXPXPXXXXX-----XXXXVPXXPXPSXPPXS 1175
P P P PP P P P P P P PS P
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV 1094
Query: 1176 XSPXSFSXXXXPPXPPPPPXAXXPXXXXXPXXXXXXPPXPXP 1301
P + P PP P PP P P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 26.6 bits (56), Expect = 8.9
Identities = 24/120 (20%), Positives = 27/120 (22%)
Frame = +3
Query: 966 AXPPXXXATXXERAXAPXPXXRPLXIXXXXXPPPPXXXXXPXXXXPXPXXXXXXXXXVPX 1145
A PP + P P+ PP P P V
Sbjct: 1148 AAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV 1207
Query: 1146 XPXPSXPPXSXSPXSFSXXXXPPXPPPPPXAXXPXXXXXPXXXXXXPPXPXPXPLXXXXP 1325
P P PP + P PP P P A P P P P
Sbjct: 1208 PPVP--PPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASP 1265
>SPBC2F12.11c |rep2||transcriptional activator
Rep2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 219
Score = 29.9 bits (64), Expect = 0.95
Identities = 23/92 (25%), Positives = 38/92 (41%)
Frame = +1
Query: 409 RKREMRKEARIIEKMKSEEETKPKIFSCKDCDKIFNTKSSLKNHRHRNHSTRGVERKKRP 588
RK++ AR++ + K +EE + +D KS+L+ R V++ RP
Sbjct: 119 RKQDKGLMARVLSRSKKQEERENHSSDARDA-----IKSALRRRMRRREGR--VQKALRP 171
Query: 589 RVTVSSFQCPDCTKRFKHKHSLDKHRDTHLEK 684
+ C C F H +L H T L +
Sbjct: 172 ---TPNLICSKCNTTFNHSTALMMHEATCLNQ 200
>SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion
cytochrome c oxidase assembly protein Cox1102,
mitochondrial ribosomal protein
Rsm2202|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 28.7 bits (61), Expect = 2.2
Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Frame = +1
Query: 427 KEARIIEKMKSEEETKPKIFSCKDCDKIFNTKSSLKNHRHRNHSTRGVERKKRPRVTVSS 606
K+A + KPK+ D IF K +RH+ S R +S
Sbjct: 482 KDASSTYSINPPSYNKPKVERNTTADPIFVGKRFYSTNRHKAFSRFADFNSHRFPCIFTS 541
Query: 607 FQCPDC---TKRFKHKHSLDK 660
F C +C T+ ++S DK
Sbjct: 542 FSCYNCISGTRNISRQYSRDK 562
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 23.8 bits (49), Expect(2) = 2.4
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +1
Query: 223 HSSRIIDCSKSVYEAKEAIKNGNLKDNF-YECPQCNILLNHPKRFLIHTKWHT 378
H SR S+ + ++ + + N Y C +C + P IHT HT
Sbjct: 439 HVSRRHSTSRKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHT 491
Score = 23.0 bits (47), Expect(2) = 2.4
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +1
Query: 472 KPKIFSCKDCDKIFNTKSSLKNHR 543
+P + C K FN +S+++ H+
Sbjct: 494 RPFVCDYAGCGKAFNVRSNMRRHQ 517
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 1155 PSXPPXSXSPXSFSXXXXPPXPPPP 1229
P PP P F PP PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 484 FSCKDCDKIFNTKSSLKNHRHRNHSTRGV 570
F C CD +F +S L NH+ H V
Sbjct: 139 FRCDKCDMMFVKQSGLTNHKRTYHQVETV 167
>SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 455 FIFSMILASFLISLFLANSVFLLIPN 378
F+ + SFL+S L S+FLLIPN
Sbjct: 96 FLLNRRKVSFLLSFLLLFSLFLLIPN 121
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +1
Query: 628 KRFKHKHSLDKHRDTHLEKTHPCAECPKKFGSQVLLXMHMKSHERVLRGPTFRCPYXGKG 807
K K + + D T+P +CPK F + L H ++HE V F C + +
Sbjct: 10 KPLKKRSRAHRLGDPRFYCTYP--DCPKSFTRKEHLRRHERTHENV---KAFSCSFCNRA 64
Query: 808 Y 810
+
Sbjct: 65 F 65
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 547 RNHSTRGVERKKR-PRVTVSSFQCPDCTKRFKHKHSLDKHRDTHLEKTHPCAECPKKFGS 723
+N+S + + R V ++ + D K +KH++ K L K ECP++
Sbjct: 807 KNNSQKDIHRNPLLSHVFDTNTKSFDTLKTLNYKHAILKKSMGELYKMEMIHECPRQLFG 866
Query: 724 QVLL 735
Q+L+
Sbjct: 867 QILV 870
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,105,629
Number of Sequences: 5004
Number of extensions: 79331
Number of successful extensions: 507
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 838459602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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