Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_E07_e437_09.seq
(1499 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 54 1e-08
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 35 0.005
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 32 0.037
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 32 0.049
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 31 0.086
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 28 0.80
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 27 1.1
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 27 1.4
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 26 2.5
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 25 4.3
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 25 5.7
DQ370039-1|ABD18600.1| 168|Anopheles gambiae putative TIL domai... 24 9.9
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 24 9.9
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 24 9.9
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 53.6 bits (123), Expect = 1e-08
Identities = 54/180 (30%), Positives = 69/180 (38%), Gaps = 19/180 (10%)
Frame = +1
Query: 307 YECPQCNILLNHPKRFLI--HTKWHTFGINKKTELARKREMRKEARIIEKMKSEEETKPK 480
Y C CN N K FL+ H K H+ K + +R + A + + + TKP
Sbjct: 127 YMCNYCNYTSN--KLFLLSRHLKTHSEDRPHKCVVC-ERGFKTLASLQNHVNTHTGTKPH 183
Query: 481 IFSCKDCDKIFNTKSSLKNH-RHRNHSTR----------GVERKK-----RPRVTVSSFQ 612
CK CD F T L H R+R+ R VE K R FQ
Sbjct: 184 --RCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQ 241
Query: 613 CPDCTKRFKHKHSLDKHRDTHL-EKTHPCAECPKKFGSQVLLXMHMKSHERVLRGPTFRC 789
CP CT K L +H H EK + C C +F L H H+ V P F+C
Sbjct: 242 CPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQ-VGNKPVFQC 300
Score = 35.1 bits (77), Expect = 0.005
Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 25/122 (20%)
Frame = +1
Query: 469 TKPKIFSCKDCDKIFNTKSSLKNHRHRNHSTRGVERKKRPRVTVSS-------------- 606
T K CK CD F + S K H + + + P ++S
Sbjct: 322 TADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQK 381
Query: 607 -FQCPDCTKRFKHKHSLDKHRD----------THLEKTHPCAECPKKFGSQVLLXMHMKS 753
++C C + F+ K L +H + T KTH C C + F + L HM
Sbjct: 382 PYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAM 441
Query: 754 HE 759
H+
Sbjct: 442 HD 443
Score = 34.7 bits (76), Expect = 0.007
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 559 TRGVERKKRPRVTVSSFQCPDCTKRFKHKHSLDKHRDTHLE-KTHPCAECPKKFGSQVLL 735
TRG K+ + T S++ C C L +H TH E + H C C + F + L
Sbjct: 114 TRG---KRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASL 170
Query: 736 XMHMKSH 756
H+ +H
Sbjct: 171 QNHVNTH 177
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 35.1 bits (77), Expect = 0.005
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -2
Query: 1306 GXGXGXGGXXXXXXGXXXXXGXXAXGGGGGXGGXXXXEKXXGEXEXGGXXGXGXXG 1139
G G G G G G GGGGG G E E GG G G G
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGG 256
Score = 30.3 bits (65), Expect = 0.15
Identities = 18/69 (26%), Positives = 19/69 (27%)
Frame = -3
Query: 1263 GXXXXXGGXXXGGXGXXEGXXXXKKXXGXXXGGGXXEXGGGXXXGGXXXXXGXGGXGXGX 1084
G GG GG G + E G G G G GG G
Sbjct: 163 GRSSSGGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGP 222
Query: 1083 XXXXXGGGG 1057
GGGG
Sbjct: 223 GPGGGGGGG 231
Score = 26.6 bits (56), Expect = 1.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 1182 GXXXGGGXXEXGGGXXXGGXXXXXGXGGXG 1093
G GG GGG GG G GG G
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 32.3 bits (70), Expect = 0.037
Identities = 26/93 (27%), Positives = 26/93 (27%), Gaps = 1/93 (1%)
Frame = -3
Query: 1323 GGXXXGXGXXGXGXXXXXXXGXXXXXGGXXXGGXGXXEGXXXXKKXXGXXXGGGXXEXGG 1144
GG G G G G G G G G G GGG G
Sbjct: 657 GGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSG--GGMIGMHSVAAGAAVAAGGG---VAG 711
Query: 1143 GXXXGGXXXXXGXGGXGX-GXXXXXXGGGGXXG 1048
G G GG G G GGGG G
Sbjct: 712 MMSTGAGVNRGGDGGCGSIGGEVGSVGGGGGGG 744
Score = 31.5 bits (68), Expect = 0.065
Identities = 24/94 (25%), Positives = 26/94 (27%), Gaps = 2/94 (2%)
Frame = -2
Query: 1246 GXXAXGGGGGXGGXXXXEKXXGEXEXGGXXGXGXXGTXXXXXXXXXGXGXXXXGXXXNXG 1067
G GGGGG GG G GG G G + G G G
Sbjct: 651 GSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSS----GGGMIGMHSVAAGAAVAAG 706
Query: 1066 GG--GXXXXXXXRGRXXGXGAXARSXXVAXXXGG 971
GG G R G + V GG
Sbjct: 707 GGVAGMMSTGAGVNRGGDGGCGSIGGEVGSVGGG 740
Score = 31.1 bits (67), Expect = 0.086
Identities = 22/92 (23%), Positives = 22/92 (23%), Gaps = 2/92 (2%)
Frame = -3
Query: 1368 GGXRXXGXXXXXXXXGGXXXGXGXXGXGXXX--XXXXGXXXXXGGXXXGGXGXXEGXXXX 1195
GG G GG G G G G GG G G
Sbjct: 663 GGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGVAGMMSTGAGVNRG 722
Query: 1194 KKXXGXXXGGGXXEXGGGXXXGGXXXXXGXGG 1099
GG GGG GG G G
Sbjct: 723 GDGGCGSIGGEVGSVGGGGGGGGSSVRDGNNG 754
Score = 29.9 bits (64), Expect = 0.20
Identities = 29/113 (25%), Positives = 30/113 (26%), Gaps = 1/113 (0%)
Frame = -2
Query: 1306 GXGXGXGGXXXXXXGXXXXXGXXAXGGGGGXGGXXXXEKXXGEXEXGGXXGXGXXGTXXX 1127
G G G GG G G + GGGGG G GG G
Sbjct: 653 GGGGGGGGGGGGSVGSGGI-GSSSLGGGGGSG---------RSSSGGGMIGMHSVAAGAA 702
Query: 1126 XXXXXXGXGXXXXGXXXNXGG-GGXXXXXXXRGRXXGXGAXARSXXVAXXXGG 971
G G N GG GG G G G S GG
Sbjct: 703 VAAGGGVAGMMSTGAGVNRGGDGGCGSIGGEVGSVGGGGGGGGSSVRDGNNGG 755
Score = 28.7 bits (61), Expect = 0.46
Identities = 19/74 (25%), Positives = 20/74 (27%)
Frame = -3
Query: 1149 GGGXXXGGXXXXXGXGGXGXGXXXXXXGGGGXXGXXXKGAXXXXXXXXXXPKXSPXXXGG 970
GGG GG G GG G GGG G + G
Sbjct: 654 GGGGGGGGGGGSVGSGGIGSSSLG--GGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGVAG 711
Query: 969 KRSPGGXXXRGXXG 928
S G RG G
Sbjct: 712 MMSTGAGVNRGGDG 725
Score = 25.8 bits (54), Expect = 3.2
Identities = 17/85 (20%), Positives = 18/85 (21%)
Frame = -2
Query: 1432 GXXXXGGXXGXXXXXXXXGXXXXXTXXXXXXXXXXXGXXXXRGXGXGXGGXXXXXXGXXX 1253
G GG G G + G G G G
Sbjct: 672 GSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGVAGMMSTGAGVNRGGDGGCGSIG 731
Query: 1252 XXGXXAXGGGGGXGGXXXXEKXXGE 1178
GGGGG G GE
Sbjct: 732 GEVGSVGGGGGGGGSSVRDGNNGGE 756
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 31.9 bits (69), Expect = 0.049
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +2
Query: 1088 PXPXPPXPXXXXXPPXXXPPPXSXXPPPFXLPXXFFXXXXPSXXPXPPXXXPP 1246
P P PP PP PPP + PF P P+ P P PP
Sbjct: 531 PPPPPPGGAVLNIPPQFLPPPLNLLRAPF-FPLNPAQLRFPAGFPNLPNAQPP 582
Score = 24.2 bits (50), Expect = 9.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 1209 PPXPPPPPXAXXP 1247
PP PPPPP P
Sbjct: 582 PPAPPPPPPMGPP 594
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 31.1 bits (67), Expect = 0.086
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = -3
Query: 1182 GXXXGGGXXEXGGGXX-XGGXXXXXGXGGXGXGXXXXXXGGGGXXGXXXKG 1033
G GGG GGG G G GG G G GG G G
Sbjct: 813 GNGGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGG 863
Score = 30.3 bits (65), Expect = 0.15
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 1237 AXGGGGGXGGXXXXEKXXGEXEXGGXXGXGXXGTXXXXXXXXXGXGXXXXGXXXNXGGGG 1058
A GGGGG G + G GG G G G G G G GGGG
Sbjct: 515 AAGGGGGGSGCVNGSRTVG---AGGMAGGGSDGP----EYEGAGRGGVGSGIGGGGGGGG 567
Score = 29.5 bits (63), Expect = 0.26
Identities = 21/67 (31%), Positives = 22/67 (32%)
Frame = -3
Query: 1230 GGXGXXEGXXXXKKXXGXXXGGGXXEXGGGXXXGGXXXXXGXGGXGXGXXXXXXGGGGXX 1051
GG G G + G GG GG G G GG G G GGGG
Sbjct: 517 GGGGGGSGCVNGSRTVGA---GGMA---GGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGR 570
Query: 1050 GXXXKGA 1030
GA
Sbjct: 571 AGGGVGA 577
Score = 29.5 bits (63), Expect = 0.26
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = -2
Query: 1231 GGGGGXGGXXXXEKXXGEXEXGGXXGXGXXGTXXXXXXXXXGXGXXXXGXXXNXGGGG 1058
GGGGG G G+ G G G G G G GGG
Sbjct: 815 GGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGGG 872
Score = 28.7 bits (61), Expect = 0.46
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = -3
Query: 1293 GXGXXXXXXXGXXXXXGGXXXGGXGXXEGXXXXKKXXGXXXGGGXXEXGGGXXXGG 1126
G G GG GG E + G GGG GGG GG
Sbjct: 519 GGGGSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGG 574
Score = 28.3 bits (60), Expect = 0.61
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 1170 GGGXXEXGGGXXXGGXXXXXGXGGXGXGXXXXXXGGGGXXGXXXKGA 1030
GGG GGG GG G G G GGG GA
Sbjct: 672 GGGAV--GGGSGAGGGAGSSGGSGGGLASGSPYGGGGHHLSHHHGGA 716
Score = 27.5 bits (58), Expect = 1.1
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = -2
Query: 1300 GXGXGGXXXXXXGXXXXXGXXAXGGGGGXGGXXXXEKXXGEXEXGGXXGXGXXG 1139
G G GG G G + G G GG + GG G G G
Sbjct: 813 GNGGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSG 866
Score = 27.1 bits (57), Expect = 1.4
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = -3
Query: 1245 GGXXXGGXGXXEGXXXXKKXXGXXXGGGXXEXGGGXXXGGXXXXXGXGGXGXGXXXXXXG 1066
G GG G G G G G G G G G G G G
Sbjct: 813 GNGGGGGAGASGGGFLITGDPSDTIGAGG--GGAGGPLRGSSGGAGGGSSGGGGSGGTSG 870
Query: 1065 GG 1060
GG
Sbjct: 871 GG 872
Score = 27.1 bits (57), Expect = 1.4
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +1
Query: 607 FQCPDCTKRFKHKHSLDKHRDTHLEKTHPCAECPKKFGSQVLLXMHMKSHERVLR 771
+ C C K ++ H + H ++H C C +KF + + H K LR
Sbjct: 899 YSCVSCHKTVSNRWH---HANIHRPQSHECPVCGQKFTRRDNMKAHCKVKHPELR 950
Score = 26.2 bits (55), Expect = 2.5
Identities = 15/59 (25%), Positives = 15/59 (25%)
Frame = -3
Query: 1263 GXXXXXGGXXXGGXGXXEGXXXXKKXXGXXXGGGXXEXGGGXXXGGXXXXXGXGGXGXG 1087
G G GG G G GG G GG G GG G
Sbjct: 813 GNGGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGG 871
Score = 26.2 bits (55), Expect = 2.5
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -2
Query: 1300 GXGXGGXXXXXXGXXXXXGXXAXGGGGGXG 1211
G G GG G G + GGGG G
Sbjct: 838 GAGGGGAGGPLRGSSGGAGGGSSGGGGSGG 867
Score = 24.2 bits (50), Expect = 9.9
Identities = 15/60 (25%), Positives = 15/60 (25%)
Frame = -3
Query: 1320 GXXXGXGXXGXGXXXXXXXGXXXXXGGXXXGGXGXXEGXXXXKKXXGXXXGGGXXEXGGG 1141
G G G G G G GG G G GGG GG
Sbjct: 812 GGNGGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGG 871
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 27.9 bits (59), Expect = 0.80
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +3
Query: 1164 PPXSXSPXSFSXXXXPPXPPPPPXAXXPXXXXXPXXXXXXPP 1289
P S S + PP PPPPP + P P P
Sbjct: 769 PSPSRSAFADGIGSPPPPPPPPPSSLSPGGVPRPTVLQKLDP 810
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 27.5 bits (58), Expect = 1.1
Identities = 18/69 (26%), Positives = 18/69 (26%), Gaps = 4/69 (5%)
Frame = +2
Query: 1109 PXXXXXPPXXXPPPXSXXPPPFXLPXXFFXXX----XPSXXPXPPXXXPPXXXXXPXXXX 1276
P P P P S PPP F P P P PP P
Sbjct: 146 PHQRDTGPALFPAPISHRPPPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGT 205
Query: 1277 XXXPXPXXP 1303
P P P
Sbjct: 206 PTQPQPPRP 214
Score = 25.0 bits (52), Expect = 5.7
Identities = 23/90 (25%), Positives = 25/90 (27%), Gaps = 5/90 (5%)
Frame = +2
Query: 929 PXXPRXXXPPGLRXPPXXXGDXXXXXXXXXXXX-XAPXXXXPXXP--PPPXIXXXXPX-- 1093
P P+ PPG PP P P P PP + P
Sbjct: 186 PPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQ 245
Query: 1094 PXPPXPXXXXXPPXXXPPPXSXXPPPFXLP 1183
P PP PP PP P P P
Sbjct: 246 PRPPSAQGMQRPPMMGQPPPIRPPNPMGGP 275
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 27.1 bits (57), Expect = 1.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 1170 GGGXXEXGGGXXXGGXXXXXGXGGXGXGXXXXXXGGGGXXG 1048
GGG GGG GG G G G G GGG G
Sbjct: 58 GGGDDGYGGG-GRGGRGGRGGGRGRGRGRGGRDGGGGFGGG 97
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 26.2 bits (55), Expect = 2.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 1182 GXXXGGGXXEXGGGXXXGGXXXXXGXGGXGXG 1087
G GGG GGG G G GG G G
Sbjct: 179 GTTNGGGELTTGGGTN-GCTKAGGGGGGTGTG 209
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 25.4 bits (53), Expect = 4.3
Identities = 15/58 (25%), Positives = 17/58 (29%)
Frame = +3
Query: 1059 PPPPXXXXXPXXXXPXPXXXXXXXXXVPXXPXPSXPPXSXSPXSFSXXXXPPXPPPPP 1232
PPP P P P P+ PP + S P PPPP
Sbjct: 629 PPPSAYQQQQPPVVPPPRTNSQSQAS---EPTPALPPRADRDSKPSSRDRPKDLPPPP 683
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 25.0 bits (52), Expect = 5.7
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = +1
Query: 607 FQCPDC-----TKRFKHKHSLDKHRDTHLEKTHPCAECPKKFGSQVLLXMHMKS 753
FQC C TK KH + HR ++ C C K F + +HM++
Sbjct: 349 FQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRA 402
>DQ370039-1|ABD18600.1| 168|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 168
Score = 24.2 bits (50), Expect = 9.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 755 CDFICIXRRTCDPNFLGHSAQG*VFSKCVSRCLSSECLCLNR 630
C CI C P F+ S +G KC+ +C S+E + L++
Sbjct: 62 CTKQCIQGCFCKPGFVRESKEG----KCIPKC-SNENMPLSK 98
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 9.9
Identities = 17/85 (20%), Positives = 19/85 (22%)
Frame = +3
Query: 972 PPXXXATXXERAXAPXPXXRPLXIXXXXXPPPPXXXXXPXXXXPXPXXXXXXXXXVPXXP 1151
PP T A P PPP P P
Sbjct: 214 PPTTTTTVWIDPTATTTTHAPTTTTTWSDQPPPPPTTTTTTVWTDPTTTITTDYTTAYPP 273
Query: 1152 XPSXPPXSXSPXSFSXXXXPPXPPP 1226
+ PP + P P PPP
Sbjct: 274 TTNEPPSTPHPTD------PHCPPP 292
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 24.2 bits (50), Expect = 9.9
Identities = 11/36 (30%), Positives = 12/36 (33%)
Frame = -3
Query: 1155 EXGGGXXXGGXXXXXGXGGXGXGXXXXXXGGGGXXG 1048
+ G G G G G G G GGG G
Sbjct: 2026 DNGCGGGNGNENDDSGDGATGSGDNGSQHGGGSISG 2061
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,097,168
Number of Sequences: 2352
Number of extensions: 23290
Number of successful extensions: 195
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 175562640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -