Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_E05_e421_09.seq
(1550 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 79 6e-14
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 79 6e-14
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 79 6e-14
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 79 6e-14
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 79 6e-14
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 79 6e-14
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 78 1e-13
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 78 1e-13
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 78 1e-13
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 78 1e-13
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 77 2e-13
BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domai... 73 2e-12
BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein. 50 3e-05
BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein. 50 3e-05
BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for IM... 49 5e-05
AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid b... 48 7e-05
BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein. 47 2e-04
AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domai... 47 2e-04
AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domai... 47 2e-04
AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens ... 47 2e-04
AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens ... 47 2e-04
BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein. 43 0.003
BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domai... 43 0.003
AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domai... 43 0.003
AK127846-1|BAC87158.1| 483|Homo sapiens protein ( Homo sapiens ... 43 0.003
BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein. 36 0.53
AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular... 36 0.53
AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein pr... 36 0.53
AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens ... 36 0.53
AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding ... 36 0.53
AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding ... 36 0.53
AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein. 36 0.53
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 33 2.1
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 33 2.1
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 33 2.1
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 33 2.1
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 33 2.1
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 33 2.1
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 33 2.1
BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domai... 33 2.1
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 33 2.1
AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein pr... 33 2.1
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 33 2.1
AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein. 33 2.1
AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein. 33 2.1
M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein. 33 2.8
DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein. 33 2.8
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 33 2.8
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 33 2.8
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 33 2.8
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 33 2.8
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 33 2.8
AF074086-5|AAD21095.2| 666|Homo sapiens gag protein. 33 2.8
AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein. 33 2.8
BC125208-1|AAI25209.1| 926|Homo sapiens KIAA1324 protein protein. 32 4.9
AY358366-1|AAQ88732.1| 995|Homo sapiens AEPG2426 protein. 32 4.9
AL356389-3|CAI13598.1| 663|Homo sapiens KIAA1324 protein. 32 4.9
AL356389-2|CAI13597.1| 675|Homo sapiens KIAA1324 protein. 32 4.9
AL356389-1|CAI13596.1| 938|Homo sapiens KIAA1324 protein. 32 4.9
AL138933-5|CAI22280.1| 938|Homo sapiens KIAA1324 protein. 32 4.9
AB037745-1|BAA92562.1| 580|Homo sapiens KIAA1324 protein protein. 32 4.9
BC113015-1|AAI13016.1| 691|Homo sapiens ZNF180 protein protein. 32 6.5
BC033642-1|AAH33642.1| 691|Homo sapiens zinc finger protein 180... 32 6.5
AF192913-1|AAF07950.1| 692|Homo sapiens zinc finger protein ZNF... 32 6.5
AC069278-1|AAF71790.1| 692|Homo sapiens ZNF180 protein. 32 6.5
U79569-1|AAD00321.1| 269|Homo sapiens no arches protein. 31 8.6
EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and polyadenyl... 31 8.6
CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein. 31 8.6
BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein. 31 8.6
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 31 8.6
BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and polyadenyl... 31 8.6
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 31 8.6
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 31 8.6
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 31 8.6
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 78.6 bits (185), Expect = 6e-14
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Frame = +2
Query: 59 AGNSARGPD--EPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG-TKT 229
+G+ A+ D E +CYNC + GHIA++C E R+ Q CYNC K GH++R+C +
Sbjct: 60 SGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKRER-EQCCYNCGKPGHLARDCDHADEQK 118
Query: 230 CYVCGKPGHISRDC 271
CY CG+ GHI +DC
Sbjct: 119 CYSCGEFGHIQKDC 132
Score = 73.3 bits (172), Expect = 2e-12
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHIS 262
CY C ++GH+A++C D CYNC + GHI+++C + + CY CGKPGH++
Sbjct: 54 CYRCGESGHLAKDC-----DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 108
Query: 263 RDCD 274
RDCD
Sbjct: 109 RDCD 112
Score = 62.5 bits (145), Expect = 4e-09
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHI 259
DE CY+C + GHI ++C + CY C ++GH++ NC ++ CY CG+ GH+
Sbjct: 115 DEQKCYSCGEFGHIQKDC-------TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHL 167
Query: 260 SRDCDEE 280
+R+C E
Sbjct: 168 ARECTIE 174
Score = 57.2 bits (132), Expect = 2e-07
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 23/86 (26%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGG---------------RDNSNQ--------TCYNCNKSGHISR 205
C+ C ++GH AR CP GG D Q CY C +SGH+++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 206 NCPDGTKTCYVCGKPGHISRDCDEER 283
+C CY CG+ GHI++DC E +
Sbjct: 66 DCDLQEDACYNCGRGGHIAKDCKEPK 91
Score = 31.9 bits (69), Expect = 6.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 158 SNQTCYNCNKSGHISRNCPDG 220
S+ C+ C +SGH +R CP G
Sbjct: 2 SSNECFKCGRSGHWARECPTG 22
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 78.6 bits (185), Expect = 6e-14
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Frame = +2
Query: 59 AGNSARGPD--EPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG-TKT 229
+G+ A+ D E +CYNC + GHIA++C E R+ Q CYNC K GH++R+C +
Sbjct: 60 SGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKRER-EQCCYNCGKPGHLARDCDHADEQK 118
Query: 230 CYVCGKPGHISRDC 271
CY CG+ GHI +DC
Sbjct: 119 CYSCGEFGHIQKDC 132
Score = 73.3 bits (172), Expect = 2e-12
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHIS 262
CY C ++GH+A++C D CYNC + GHI+++C + + CY CGKPGH++
Sbjct: 54 CYRCGESGHLAKDC-----DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 108
Query: 263 RDCD 274
RDCD
Sbjct: 109 RDCD 112
Score = 62.5 bits (145), Expect = 4e-09
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHI 259
DE CY+C + GHI ++C + CY C ++GH++ NC ++ CY CG+ GH+
Sbjct: 115 DEQKCYSCGEFGHIQKDC-------TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHL 167
Query: 260 SRDCDEE 280
+R+C E
Sbjct: 168 ARECTIE 174
Score = 57.2 bits (132), Expect = 2e-07
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 23/86 (26%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGG---------------RDNSNQ--------TCYNCNKSGHISR 205
C+ C ++GH AR CP GG D Q CY C +SGH+++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 206 NCPDGTKTCYVCGKPGHISRDCDEER 283
+C CY CG+ GHI++DC E +
Sbjct: 66 DCDLQEDACYNCGRGGHIAKDCKEPK 91
Score = 31.9 bits (69), Expect = 6.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 158 SNQTCYNCNKSGHISRNCPDG 220
S+ C+ C +SGH +R CP G
Sbjct: 2 SSNECFKCGRSGHWARECPTG 22
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 78.6 bits (185), Expect = 6e-14
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Frame = +2
Query: 59 AGNSARGPD--EPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG-TKT 229
+G+ A+ D E +CYNC + GHIA++C E R+ Q CYNC K GH++R+C +
Sbjct: 60 SGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKRER-EQCCYNCGKPGHLARDCDHADEQK 118
Query: 230 CYVCGKPGHISRDC 271
CY CG+ GHI +DC
Sbjct: 119 CYSCGEFGHIQKDC 132
Score = 73.3 bits (172), Expect = 2e-12
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHIS 262
CY C ++GH+A++C D CYNC + GHI+++C + + CY CGKPGH++
Sbjct: 54 CYRCGESGHLAKDC-----DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 108
Query: 263 RDCD 274
RDCD
Sbjct: 109 RDCD 112
Score = 62.5 bits (145), Expect = 4e-09
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHI 259
DE CY+C + GHI ++C + CY C ++GH++ NC ++ CY CG+ GH+
Sbjct: 115 DEQKCYSCGEFGHIQKDC-------TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHL 167
Query: 260 SRDCDEE 280
+R+C E
Sbjct: 168 ARECTIE 174
Score = 57.2 bits (132), Expect = 2e-07
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 23/86 (26%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGG---------------RDNSNQ--------TCYNCNKSGHISR 205
C+ C ++GH AR CP GG D Q CY C +SGH+++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 206 NCPDGTKTCYVCGKPGHISRDCDEER 283
+C CY CG+ GHI++DC E +
Sbjct: 66 DCDLQEDACYNCGRGGHIAKDCKEPK 91
Score = 31.9 bits (69), Expect = 6.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 158 SNQTCYNCNKSGHISRNCPDG 220
S+ C+ C +SGH +R CP G
Sbjct: 2 SSNECFKCGRSGHWARECPTG 22
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 78.6 bits (185), Expect = 6e-14
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Frame = +2
Query: 59 AGNSARGPD--EPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG-TKT 229
+G+ A+ D E +CYNC + GHIA++C E R+ Q CYNC K GH++R+C +
Sbjct: 53 SGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKRER-EQCCYNCGKPGHLARDCDHADEQK 111
Query: 230 CYVCGKPGHISRDC 271
CY CG+ GHI +DC
Sbjct: 112 CYSCGEFGHIQKDC 125
Score = 73.3 bits (172), Expect = 2e-12
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHIS 262
CY C ++GH+A++C D CYNC + GHI+++C + + CY CGKPGH++
Sbjct: 47 CYRCGESGHLAKDC-----DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 101
Query: 263 RDCD 274
RDCD
Sbjct: 102 RDCD 105
Score = 62.5 bits (145), Expect = 4e-09
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 16/79 (20%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGG--------RDNSNQ--------TCYNCNKSGHISRNCPDGTK 226
C+ C ++GH AR CP GG R Q CY C +SGH++++C
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 227 TCYVCGKPGHISRDCDEER 283
CY CG+ GHI++DC E +
Sbjct: 66 ACYNCGRGGHIAKDCKEPK 84
Score = 62.5 bits (145), Expect = 4e-09
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHI 259
DE CY+C + GHI ++C + CY C ++GH++ NC ++ CY CG+ GH+
Sbjct: 108 DEQKCYSCGEFGHIQKDC-------TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHL 160
Query: 260 SRDCDEE 280
+R+C E
Sbjct: 161 ARECTIE 167
Score = 37.5 bits (83), Expect = 0.13
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 21/60 (35%)
Frame = +2
Query: 158 SNQTCYNCNKSGHISRNCPDG---------------------TKTCYVCGKPGHISRDCD 274
S+ C+ C +SGH +R CP G CY CG+ GH+++DCD
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 78.6 bits (185), Expect = 6e-14
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Frame = +2
Query: 59 AGNSARGPD--EPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG-TKT 229
+G+ A+ D E +CYNC + GHIA++C E R+ Q CYNC K GH++R+C +
Sbjct: 53 SGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKRER-EQCCYNCGKPGHLARDCDHADEQK 111
Query: 230 CYVCGKPGHISRDC 271
CY CG+ GHI +DC
Sbjct: 112 CYSCGEFGHIQKDC 125
Score = 73.3 bits (172), Expect = 2e-12
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHIS 262
CY C ++GH+A++C D CYNC + GHI+++C + + CY CGKPGH++
Sbjct: 47 CYRCGESGHLAKDC-----DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 101
Query: 263 RDCD 274
RDCD
Sbjct: 102 RDCD 105
Score = 62.5 bits (145), Expect = 4e-09
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 16/79 (20%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGG--------RDNSNQ--------TCYNCNKSGHISRNCPDGTK 226
C+ C ++GH AR CP GG R Q CY C +SGH++++C
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 227 TCYVCGKPGHISRDCDEER 283
CY CG+ GHI++DC E +
Sbjct: 66 ACYNCGRGGHIAKDCKEPK 84
Score = 62.5 bits (145), Expect = 4e-09
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHI 259
DE CY+C + GHI ++C + CY C ++GH++ NC ++ CY CG+ GH+
Sbjct: 108 DEQKCYSCGEFGHIQKDC-------TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHL 160
Query: 260 SRDCDEE 280
+R+C E
Sbjct: 161 ARECTIE 167
Score = 37.5 bits (83), Expect = 0.13
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 21/60 (35%)
Frame = +2
Query: 158 SNQTCYNCNKSGHISRNCPDG---------------------TKTCYVCGKPGHISRDCD 274
S+ C+ C +SGH +R CP G CY CG+ GH+++DCD
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 78.6 bits (185), Expect = 6e-14
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Frame = +2
Query: 59 AGNSARGPD--EPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG-TKT 229
+G+ A+ D E +CYNC + GHIA++C E R+ Q CYNC K GH++R+C +
Sbjct: 60 SGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKRER-EQCCYNCGKPGHLARDCDHADEQK 118
Query: 230 CYVCGKPGHISRDC 271
CY CG+ GHI +DC
Sbjct: 119 CYSCGEFGHIQKDC 132
Score = 73.3 bits (172), Expect = 2e-12
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHIS 262
CY C ++GH+A++C D CYNC + GHI+++C + + CY CGKPGH++
Sbjct: 54 CYRCGESGHLAKDC-----DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 108
Query: 263 RDCD 274
RDCD
Sbjct: 109 RDCD 112
Score = 62.5 bits (145), Expect = 4e-09
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHI 259
DE CY+C + GHI ++C + CY C ++GH++ NC ++ CY CG+ GH+
Sbjct: 115 DEQKCYSCGEFGHIQKDC-------TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHL 167
Query: 260 SRDCDEE 280
+R+C E
Sbjct: 168 ARECTIE 174
Score = 57.2 bits (132), Expect = 2e-07
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 23/86 (26%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGG---------------RDNSNQ--------TCYNCNKSGHISR 205
C+ C ++GH AR CP GG D Q CY C +SGH+++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 206 NCPDGTKTCYVCGKPGHISRDCDEER 283
+C CY CG+ GHI++DC E +
Sbjct: 66 DCDLQEDACYNCGRGGHIAKDCKEPK 91
Score = 31.9 bits (69), Expect = 6.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 158 SNQTCYNCNKSGHISRNCPDG 220
S+ C+ C +SGH +R CP G
Sbjct: 2 SSNECFKCGRSGHWARECPTG 22
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 77.8 bits (183), Expect = 1e-13
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG-TKTCYVCGKPGHI 259
D +CYNC + GHIA++C E R+ Q CYNC K GH++R+C + CY CG+ GHI
Sbjct: 65 DVEACYNCGRGGHIAKDCKEPKRER-EQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 123
Query: 260 SRDC 271
+DC
Sbjct: 124 QKDC 127
Score = 72.1 bits (169), Expect = 5e-12
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHIS 262
CY C ++GH+A++C + CYNC + GHI+++C + + CY CGKPGH++
Sbjct: 47 CYRCGESGHLAKDCD---LQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 103
Query: 263 RDCD 274
RDCD
Sbjct: 104 RDCD 107
Score = 62.5 bits (145), Expect = 4e-09
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHI 259
DE CY+C + GHI ++C + CY C ++GH++ NC ++ CY CG+ GH+
Sbjct: 110 DEQKCYSCGEFGHIQKDC-------TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHL 162
Query: 260 SRDCDEE 280
+R+C E
Sbjct: 163 ARECTIE 169
Score = 61.3 bits (142), Expect = 9e-09
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 18/81 (22%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGG--------RDNSNQ--------TCYNCNKSGHISRNC--PDG 220
C+ C ++GH AR CP GG R Q CY C +SGH++++C +
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 221 TKTCYVCGKPGHISRDCDEER 283
+ CY CG+ GHI++DC E +
Sbjct: 66 VEACYNCGRGGHIAKDCKEPK 86
Score = 37.9 bits (84), Expect = 0.099
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 21/70 (30%)
Frame = +2
Query: 158 SNQTCYNCNKSGHISRNCPDG---------------------TKTCYVCGKPGHISRDCD 274
S+ C+ C +SGH +R CP G CY CG+ GH+++DCD
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 275 EERN*HAPNN 304
+ + A N
Sbjct: 62 LQEDVEACYN 71
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 77.8 bits (183), Expect = 1e-13
Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG-TKTCYVCGKPGHI 259
++ +CYNC + GHIA++C E R+ Q CYNC K GH++R+C + CY CG+ GHI
Sbjct: 64 EDEACYNCGRGGHIAKDCKEPKRER-EQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 122
Query: 260 SRDC 271
+DC
Sbjct: 123 QKDC 126
Score = 72.5 bits (170), Expect = 4e-12
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHIS 262
CY C ++GH+A++C ++ CYNC + GHI+++C + + CY CGKPGH++
Sbjct: 47 CYRCGESGHLAKDCDL----QEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 102
Query: 263 RDCD 274
RDCD
Sbjct: 103 RDCD 106
Score = 62.5 bits (145), Expect = 4e-09
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHI 259
DE CY+C + GHI ++C + CY C ++GH++ NC ++ CY CG+ GH+
Sbjct: 109 DEQKCYSCGEFGHIQKDC-------TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHL 161
Query: 260 SRDCDEE 280
+R+C E
Sbjct: 162 ARECTIE 168
Score = 60.5 bits (140), Expect = 2e-08
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 17/80 (21%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGG--------RDNSNQ--------TCYNCNKSGHISRNCP-DGT 223
C+ C ++GH AR CP GG R Q CY C +SGH++++C
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 224 KTCYVCGKPGHISRDCDEER 283
+ CY CG+ GHI++DC E +
Sbjct: 66 EACYNCGRGGHIAKDCKEPK 85
Score = 37.5 bits (83), Expect = 0.13
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 21/60 (35%)
Frame = +2
Query: 158 SNQTCYNCNKSGHISRNCPDG---------------------TKTCYVCGKPGHISRDCD 274
S+ C+ C +SGH +R CP G CY CG+ GH+++DCD
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 77.8 bits (183), Expect = 1e-13
Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG-TKTCYVCGKPGHI 259
++ +CYNC + GHIA++C E R+ Q CYNC K GH++R+C + CY CG+ GHI
Sbjct: 71 EDEACYNCGRGGHIAKDCKEPKRER-EQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 129
Query: 260 SRDC 271
+DC
Sbjct: 130 QKDC 133
Score = 72.5 bits (170), Expect = 4e-12
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHIS 262
CY C ++GH+A++C ++ CYNC + GHI+++C + + CY CGKPGH++
Sbjct: 54 CYRCGESGHLAKDCDL----QEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 109
Query: 263 RDCD 274
RDCD
Sbjct: 110 RDCD 113
Score = 62.5 bits (145), Expect = 4e-09
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHI 259
DE CY+C + GHI ++C + CY C ++GH++ NC ++ CY CG+ GH+
Sbjct: 116 DEQKCYSCGEFGHIQKDC-------TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHL 168
Query: 260 SRDCDEE 280
+R+C E
Sbjct: 169 ARECTIE 175
Score = 55.2 bits (127), Expect = 6e-07
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 24/87 (27%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGG---------------RDNSNQ--------TCYNCNKSGHISR 205
C+ C ++GH AR CP GG D Q CY C +SGH+++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 206 NCP-DGTKTCYVCGKPGHISRDCDEER 283
+C + CY CG+ GHI++DC E +
Sbjct: 66 DCDLQEDEACYNCGRGGHIAKDCKEPK 92
Score = 31.9 bits (69), Expect = 6.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 158 SNQTCYNCNKSGHISRNCPDG 220
S+ C+ C +SGH +R CP G
Sbjct: 2 SSNECFKCGRSGHWARECPTG 22
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 77.8 bits (183), Expect = 1e-13
Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG-TKTCYVCGKPGHI 259
++ +CYNC + GHIA++C E R+ Q CYNC K GH++R+C + CY CG+ GHI
Sbjct: 71 EDEACYNCGRGGHIAKDCKEPKRER-EQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 129
Query: 260 SRDC 271
+DC
Sbjct: 130 QKDC 133
Score = 72.5 bits (170), Expect = 4e-12
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHIS 262
CY C ++GH+A++C ++ CYNC + GHI+++C + + CY CGKPGH++
Sbjct: 54 CYRCGESGHLAKDCDL----QEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 109
Query: 263 RDCD 274
RDCD
Sbjct: 110 RDCD 113
Score = 62.5 bits (145), Expect = 4e-09
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHI 259
DE CY+C + GHI ++C + CY C ++GH++ NC ++ CY CG+ GH+
Sbjct: 116 DEQKCYSCGEFGHIQKDC-------TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHL 168
Query: 260 SRDCDEE 280
+R+C E
Sbjct: 169 ARECTIE 175
Score = 55.2 bits (127), Expect = 6e-07
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 24/87 (27%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGG---------------RDNSNQ--------TCYNCNKSGHISR 205
C+ C ++GH AR CP GG D Q CY C +SGH+++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 206 NCP-DGTKTCYVCGKPGHISRDCDEER 283
+C + CY CG+ GHI++DC E +
Sbjct: 66 DCDLQEDEACYNCGRGGHIAKDCKEPK 92
Score = 31.9 bits (69), Expect = 6.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 158 SNQTCYNCNKSGHISRNCPDG 220
S+ C+ C +SGH +R CP G
Sbjct: 2 SSNECFKCGRSGHWARECPTG 22
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 76.6 bits (180), Expect = 2e-13
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Frame = +2
Query: 53 RAAGNSARGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT- 229
R+ G D CY C ++GH+A++C D CYNC + GHI+++C + +
Sbjct: 30 RSRGRGGFTSDRDICYRCGESGHLAKDC-----DLQEDACYNCGRGGHIAKDCKEPKRER 84
Query: 230 ---CYVCGKPGHISRDCD 274
CY CGKPGH++RDCD
Sbjct: 85 EQCCYNCGKPGHLARDCD 102
Score = 65.3 bits (152), Expect = 6e-10
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGR-------------DNSNQTCYNCNKSGHISRNCPDGTKTCY 235
C+ C ++GH AR CP GG + CY C +SGH++++C CY
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQEDACY 65
Query: 236 VCGKPGHISRDCDEER 283
CG+ GHI++DC E +
Sbjct: 66 NCGRGGHIAKDCKEPK 81
Score = 62.5 bits (145), Expect = 4e-09
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK-TCYVCGKPGHI 259
DE CY+C + GHI ++C + CY C ++GH++ NC ++ CY CG+ GH+
Sbjct: 105 DEQKCYSCGEFGHIQKDC-------TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHL 157
Query: 260 SRDCDEE 280
+R+C E
Sbjct: 158 ARECTIE 164
Score = 39.9 bits (89), Expect = 0.025
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 18/57 (31%)
Frame = +2
Query: 158 SNQTCYNCNKSGHISRNCPDG------------------TKTCYVCGKPGHISRDCD 274
S+ C+ C +SGH +R CP G CY CG+ GH+++DCD
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCD 58
>BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domain
containing 13 protein.
Length = 166
Score = 73.3 bits (172), Expect = 2e-12
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP-DGTKTCYVCGKPGHISRDC 271
CYNC ++GHIA++C + R+ Q CY C + GH++R+C + CY CGK GHI +DC
Sbjct: 67 CYNCGRSGHIAKDCKDPKRER-RQHCYTCGRLGHLARDCDRQKEQKCYSCGKLGHIQKDC 125
Score = 67.3 bits (157), Expect = 1e-10
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Frame = +2
Query: 92 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHI 259
+CY C ++G A+NC G CYNC +SGHI+++C D + CY CG+ GH+
Sbjct: 46 TCYCCGESGRNAKNCVLLGN-----ICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHL 100
Query: 260 SRDCDEER 283
+RDCD ++
Sbjct: 101 ARDCDRQK 108
Score = 62.5 bits (145), Expect = 4e-09
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDCD 274
CY C + GH+AR+C Q CY+C K GHI ++C CY CG+ GH++ +C
Sbjct: 91 CYTCGRLGHLARDCDR----QKEQKCYSCGKLGHIQKDCAQ--VKCYRCGEIGHVAINCS 144
Query: 275 EER 283
+ R
Sbjct: 145 KAR 147
Score = 52.8 bits (121), Expect = 3e-06
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 16/78 (20%)
Frame = +2
Query: 98 YNCNKTGHIARNCPEGGRDNS----------------NQTCYNCNKSGHISRNCPDGTKT 229
+ C +GH AR CP GG + TCY C +SG ++NC
Sbjct: 7 FACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNCVLLGNI 66
Query: 230 CYVCGKPGHISRDCDEER 283
CY CG+ GHI++DC + +
Sbjct: 67 CYNCGRSGHIAKDCKDPK 84
Score = 41.5 bits (93), Expect = 0.008
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 62 GNSARGPD---EPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 211
G+ AR D E CY+C K GHI ++C + CY C + GH++ NC
Sbjct: 98 GHLARDCDRQKEQKCYSCGKLGHIQKDC-------AQVKCYRCGEIGHVAINC 143
>BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein.
Length = 271
Score = 49.6 bits (113), Expect = 3e-05
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Frame = +2
Query: 95 CYNCNKTGHIARNC-----PEGGRDNSNQTCYNCNKSGHISRNCPDGTK-------TCYV 238
CY C T H C P G + C+ C + GH+SR+CPD K C +
Sbjct: 157 CYRCGSTEHEITKCKAKVDPALG-EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKL 215
Query: 239 CGKPGHISRDCDEERN 286
CG H+ +DC E +N
Sbjct: 216 CGSVEHLKKDCPESQN 231
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 11/72 (15%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEG--GRDNSNQTCYNCNKSGHISRNCPDGT---------KTCYVC 241
C++C K GH +CP +D CY C + H C C+VC
Sbjct: 130 CFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVC 189
Query: 242 GKPGHISRDCDE 277
G+ GH+SR C +
Sbjct: 190 GEMGHLSRSCPD 201
>BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein.
Length = 274
Score = 49.6 bits (113), Expect = 3e-05
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Frame = +2
Query: 95 CYNCNKTGHIARNC-----PEGGRDNSNQTCYNCNKSGHISRNCPDGTK-------TCYV 238
CY C T H C P G + C+ C + GH+SR+CPD K C +
Sbjct: 157 CYRCGSTEHEITKCKAKVDPALG-EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKL 215
Query: 239 CGKPGHISRDCDEERN 286
CG H+ +DC E +N
Sbjct: 216 CGSVEHLKKDCPESQN 231
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 11/72 (15%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEG--GRDNSNQTCYNCNKSGHISRNCPDGT---------KTCYVC 241
C++C K GH +CP +D CY C + H C C+VC
Sbjct: 130 CFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVC 189
Query: 242 GKPGHISRDCDE 277
G+ GH+SR C +
Sbjct: 190 GEMGHLSRSCPD 201
>BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for
IMAGE:4046616) protein.
Length = 405
Score = 48.8 bits (111), Expect = 5e-05
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 271
C NC+K GH+++NCP + C+ C++ GH+ +CP C C P + R C
Sbjct: 243 CRNCDKRGHLSKNCP---LPRKVRRCFLCSRRGHLLYSCP--APLCEYCPVPKMLDRSC 296
Score = 47.2 bits (107), Expect = 2e-04
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 155 NSNQTCYNCNKSGHISRNCPDGTKT--CYVCGKPGHISRDC 271
N N C NC+K GH+S+NCP K C++C + GH+ C
Sbjct: 238 NKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 278
>AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid
binding protein protein.
Length = 54
Score = 48.4 bits (110), Expect = 7e-05
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 116 GHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKT-CYVCGKPGHISRDCDEE 280
GHI ++C + CY C ++GH++ NC ++ CY CG+ GH++R+C E
Sbjct: 3 GHIQKDC-------TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIE 51
Score = 48.4 bits (110), Expect = 7e-05
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 211
CY C +TGH+A NC + S CY C +SGH++R C
Sbjct: 14 CYRCGETGHVAINCSK----TSEVNCYRCGESGHLAREC 48
>BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein.
Length = 542
Score = 47.2 bits (107), Expect = 2e-04
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 155 NSNQTCYNCNKSGHISRNCPDGTKT--CYVCGKPGHISRDC 271
N N C NC+K GH+S+NCP K C++C + GH+ C
Sbjct: 237 NKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 277
Score = 46.8 bits (106), Expect = 2e-04
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 271
C NC+K GH+++NCP + C+ C++ GH+ +CP C C P + C
Sbjct: 242 CRNCDKRGHLSKNCP---LPRKVRRCFLCSRRGHLLYSCP--APLCEYCPVPKMLDHSC 295
>AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 47.2 bits (107), Expect = 2e-04
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 155 NSNQTCYNCNKSGHISRNCPDGTKT--CYVCGKPGHISRDC 271
N N C NC+K GH+S+NCP K C++C + GH+ C
Sbjct: 238 NKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 278
Score = 46.8 bits (106), Expect = 2e-04
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 271
C NC+K GH+++NCP + C+ C++ GH+ +CP C C P + C
Sbjct: 243 CRNCDKRGHLSKNCP---LPRKVRRCFLCSRRGHLLYSCP--APLCEYCPVPKMLDHSC 296
>AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 47.2 bits (107), Expect = 2e-04
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 155 NSNQTCYNCNKSGHISRNCPDGTKT--CYVCGKPGHISRDC 271
N N C NC+K GH+S+NCP K C++C + GH+ C
Sbjct: 238 NKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 278
Score = 46.8 bits (106), Expect = 2e-04
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 271
C NC+K GH+++NCP + C+ C++ GH+ +CP C C P + C
Sbjct: 243 CRNCDKRGHLSKNCP---LPRKVRRCFLCSRRGHLLYSCP--APLCEYCPVPKMLDHSC 296
>AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens
cDNA FLJ90127 fis, clone HEMBB1000106, weakly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 391
Score = 47.2 bits (107), Expect = 2e-04
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 155 NSNQTCYNCNKSGHISRNCPDGTKT--CYVCGKPGHISRDC 271
N N C NC+K GH+S+NCP K C++C + GH+ C
Sbjct: 86 NKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 126
Score = 46.8 bits (106), Expect = 2e-04
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 271
C NC+K GH+++NCP + C+ C++ GH+ +CP C C P + C
Sbjct: 91 CRNCDKRGHLSKNCP---LPRKVRRCFLCSRRGHLLYSCP--APLCEYCPVPKMLDHSC 144
>AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22611 fis, clone HSI04961. ).
Length = 454
Score = 47.2 bits (107), Expect = 2e-04
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 155 NSNQTCYNCNKSGHISRNCPDGTKT--CYVCGKPGHISRDC 271
N N C NC+K GH+S+NCP K C++C + GH+ C
Sbjct: 238 NKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 278
Score = 46.8 bits (106), Expect = 2e-04
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 271
C NC+K GH+++NCP + C+ C++ GH+ +CP C C P + C
Sbjct: 243 CRNCDKRGHLSKNCP---LPRKVRRCFLCSRRGHLLYSCP--APLCEYCPVPKMLDHSC 296
>BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein.
Length = 239
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 92 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 271
+C+ C H++ +C + C+ C + GH+S C G C +CGK GH C
Sbjct: 170 TCFKCGSRTHMSGSCTQ-------DRCFRCGEEGHLSPYCRKGI-VCNLCGKRGHAFAQC 221
Score = 35.1 bits (77), Expect = 0.70
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 164 QTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 271
+TC+ C H+S +C C+ CG+ GH+S C
Sbjct: 169 KTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYC 202
>BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 403
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 92 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 271
+C+ C H++ +C + C+ C + GH+S C G C +CGK GH C
Sbjct: 334 TCFKCGSRTHMSGSCTQ-------DRCFRCGEEGHLSPYCRKGI-VCNLCGKRGHAFAQC 385
Score = 35.1 bits (77), Expect = 0.70
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 164 QTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 271
+TC+ C H+S +C C+ CG+ GH+S C
Sbjct: 333 KTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYC 366
>AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 404
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 92 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 271
+C+ C H++ +C + C+ C + GH+S C G C +CGK GH C
Sbjct: 335 TCFKCGSRTHMSGSCTQ-------DRCFRCGEEGHLSPYCRKGI-VCNLCGKRGHAFAQC 386
Score = 35.1 bits (77), Expect = 0.70
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 164 QTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 271
+TC+ C H+S +C C+ CG+ GH+S C
Sbjct: 334 KTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYC 367
>AK127846-1|BAC87158.1| 483|Homo sapiens protein ( Homo sapiens
cDNA FLJ45949 fis, clone PLACE7007973. ).
Length = 483
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 92 SCYNCNKTGHIARNCPEGGRDNSNQT-CYNCNKSGHISRNCPDGTK 226
+CY C K GH NCP G R T C C K + NCP+ K
Sbjct: 436 NCYQCGKPGHWKANCPYGPRGEKPCTACPLCRKLRYWKENCPESQK 481
Score = 34.3 bits (75), Expect = 1.2
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Frame = +2
Query: 134 CPEGGRDNSNQTCYNCNKSGHISRNCPDGTK------TCYVCGKPGHISRDCDEER 283
CP +D CY C K GH NCP G + C +C K + +C E +
Sbjct: 428 CP---KDTFPGNCYQCGKPGHWKANCPYGPRGEKPCTACPLCRKLRYWKENCPESQ 480
>BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein.
Length = 919
Score = 35.5 bits (78), Expect = 0.53
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 77 GPDEPS--CYNCNKTGHIARNCPEGGRDN 157
GP PS C+ C K GH +NCP G N
Sbjct: 153 GPPPPSYTCFRCGKPGHYIKNCPTNGDKN 181
>AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular
protein PACT protein.
Length = 1625
Score = 35.5 bits (78), Expect = 0.53
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 77 GPDEPS--CYNCNKTGHIARNCPEGGRDN 157
GP PS C+ C K GH +NCP G N
Sbjct: 20 GPPPPSYTCFRCGKPGHYIKNCPTNGDKN 48
>AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein
protein.
Length = 899
Score = 35.5 bits (78), Expect = 0.53
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 122 IARNCPEGGRDNSNQTCYNCNKSGHISRNC 211
+A G + N N +CYNC SGH +++C
Sbjct: 838 VANTSGSGPKKNGNVSCYNCGVSGHYAQDC 867
Score = 34.3 bits (75), Expect = 1.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 59 AGNSARGPDEP---SCYNCNKTGHIARNCPEGGRDNSNQTCY 175
A S GP + SCYNC +GH A++C + + + Q Y
Sbjct: 839 ANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQSSMEANQQGTY 880
>AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens
cDNA FLJ20281 fis, clone HEP03769. ).
Length = 298
Score = 35.5 bits (78), Expect = 0.53
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 122 IARNCPEGGRDNSNQTCYNCNKSGHISRNC 211
+A G + N N +CYNC SGH +++C
Sbjct: 237 VANTSGSGPKKNGNVSCYNCGVSGHYAQDC 266
Score = 34.3 bits (75), Expect = 1.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 59 AGNSARGPDEP---SCYNCNKTGHIARNCPEGGRDNSNQTCY 175
A S GP + SCYNC +GH A++C + + + Q Y
Sbjct: 238 ANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQSSMEANQQGTY 279
>AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding
protein 6 isoform 2 protein.
Length = 1758
Score = 35.5 bits (78), Expect = 0.53
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 77 GPDEPS--CYNCNKTGHIARNCPEGGRDN 157
GP PS C+ C K GH +NCP G N
Sbjct: 153 GPPPPSYTCFRCGKPGHYIKNCPTNGDKN 181
>AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding
protein 6 isoform 1 protein.
Length = 1792
Score = 35.5 bits (78), Expect = 0.53
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 77 GPDEPS--CYNCNKTGHIARNCPEGGRDN 157
GP PS C+ C K GH +NCP G N
Sbjct: 153 GPPPPSYTCFRCGKPGHYIKNCPTNGDKN 181
>AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein.
Length = 855
Score = 35.5 bits (78), Expect = 0.53
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 122 IARNCPEGGRDNSNQTCYNCNKSGHISRNC 211
+A G + N N +CYNC SGH +++C
Sbjct: 794 VANTSGSGPKKNGNVSCYNCGVSGHYAQDC 823
Score = 34.3 bits (75), Expect = 1.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 59 AGNSARGPDEP---SCYNCNKTGHIARNCPEGGRDNSNQTCY 175
A S GP + SCYNC +GH A++C + + + Q Y
Sbjct: 795 ANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQSSMEANQQGTY 836
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +2
Query: 50 PRAAGNSARGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP 214
P+ R P CYNC H A+ C + C+ C H+ NCP
Sbjct: 114 PKGKTLQKRKPKGDRCYNCGGLDHHAKEC---SLPPQPKKCHYCQSIMHMVANCP 165
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +2
Query: 50 PRAAGNSARGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP 214
P+ R P CYNC H A+ C + C+ C H+ NCP
Sbjct: 114 PKGKTLQKRKPKGDRCYNCGGLDHHAKEC---SLPPQPKKCHYCQSIMHMVANCP 165
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +2
Query: 50 PRAAGNSARGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP 214
P+ R P CYNC H A+ C + C+ C H+ NCP
Sbjct: 91 PKGKTLQKRKPKGDRCYNCGGLDHHAKEC---SLPPQPKKCHYCQSIMHMVANCP 142
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +2
Query: 50 PRAAGNSARGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP 214
P+ R P CYNC H A+ C + C+ C H+ NCP
Sbjct: 91 PKGKTLQKRKPKGDRCYNCGGLDHHAKEC---SLPPQPKKCHYCQSIMHMVANCP 142
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +2
Query: 50 PRAAGNSARGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP 214
P+ R P CYNC H A+ C + C+ C H+ NCP
Sbjct: 91 PKGKTLQKRKPKGDRCYNCGGLDHHAKEC---SLPPQPKKCHYCQSIMHMVANCP 142
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +2
Query: 50 PRAAGNSARGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP 214
P+ R P CYNC H A+ C + C+ C H+ NCP
Sbjct: 91 PKGKTLQKRKPKGDRCYNCGGLDHHAKEC---SLPPQPKKCHYCQSIMHMVANCP 142
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +2
Query: 50 PRAAGNSARGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP 214
P+ R P CYNC H A+ C + C+ C H+ NCP
Sbjct: 91 PKGKTLQKRKPKGDRCYNCGGLDHHAKEC---SLPPQPKKCHYCQSIMHMVANCP 142
>BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domain
containing 14 protein.
Length = 949
Score = 33.5 bits (73), Expect = 2.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 62 GNSARGPDEPSCYNCNKTGHIARNCPEGGRD 154
G+S + SCYNC TGH A++C + D
Sbjct: 897 GSSHKKSGNLSCYNCGATGHRAQDCKQPSMD 927
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +2
Query: 50 PRAAGNSARGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP 214
P+ R P CYNC H A+ C + C+ C H+ NCP
Sbjct: 114 PKGKTLQKRKPKGDRCYNCGGLDHHAKEC---SLPPQPKKCHYCQSIMHMVANCP 165
>AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 33.5 bits (73), Expect = 2.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 62 GNSARGPDEPSCYNCNKTGHIARNCPEGGRD 154
G+S + SCYNC TGH A++C + D
Sbjct: 780 GSSHKKSGNLSCYNCGATGHRAQDCKQPSMD 810
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +2
Query: 50 PRAAGNSARGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP 214
P+ R P CYNC H A+ C + C+ C H+ NCP
Sbjct: 114 PKGKTLQKRKPKGDRCYNCGGLDHHAKEC---SLPPQPKKCHYCQSIMHMVANCP 165
>AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein.
Length = 949
Score = 33.5 bits (73), Expect = 2.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 62 GNSARGPDEPSCYNCNKTGHIARNCPEGGRD 154
G+S + SCYNC TGH A++C + D
Sbjct: 897 GSSHKKSGNLSCYNCGATGHRAQDCKQPSMD 927
>AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein.
Length = 910
Score = 33.5 bits (73), Expect = 2.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 62 GNSARGPDEPSCYNCNKTGHIARNCPEGGRD 154
G+S + SCYNC TGH A++C + D
Sbjct: 858 GSSHKKSGNLSCYNCGATGHRAQDCKQPSMD 888
>M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein.
Length = 434
Score = 33.1 bits (72), Expect = 2.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDN 157
CYNC + GH+ +NCP + N
Sbjct: 314 CYNCGQIGHLKKNCPVLNKQN 334
Score = 32.3 bits (70), Expect = 4.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 170 CYNCNKSGHISRNCP 214
CYNC + GH+ +NCP
Sbjct: 314 CYNCGQIGHLKKNCP 328
>DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein.
Length = 668
Score = 33.1 bits (72), Expect = 2.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDN 157
CYNC + GH+ +NCP + N
Sbjct: 545 CYNCGQIGHLKKNCPVLNKQN 565
Score = 32.3 bits (70), Expect = 4.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 170 CYNCNKSGHISRNCP 214
CYNC + GH+ +NCP
Sbjct: 545 CYNCGQIGHLKKNCP 559
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 33.1 bits (72), Expect = 2.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDN 157
CYNC + GH+ +NCP + N
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQN 566
Score = 32.3 bits (70), Expect = 4.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 170 CYNCNKSGHISRNCP 214
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 33.1 bits (72), Expect = 2.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDN 157
CYNC + GH+ +NCP + N
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQN 566
Score = 32.3 bits (70), Expect = 4.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 170 CYNCNKSGHISRNCP 214
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 33.1 bits (72), Expect = 2.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDN 157
CYNC + GH+ +NCP + N
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQN 566
Score = 32.3 bits (70), Expect = 4.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 170 CYNCNKSGHISRNCP 214
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 33.1 bits (72), Expect = 2.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDN 157
CYNC + GH+ +NCP + N
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQN 566
Score = 32.3 bits (70), Expect = 4.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 170 CYNCNKSGHISRNCP 214
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 33.1 bits (72), Expect = 2.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDN 157
CYNC + GH+ +NCP + N
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQN 566
Score = 32.3 bits (70), Expect = 4.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 170 CYNCNKSGHISRNCP 214
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
>AF074086-5|AAD21095.2| 666|Homo sapiens gag protein.
Length = 666
Score = 33.1 bits (72), Expect = 2.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDN 157
CYNC + GH+ +NCP + N
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQN 566
Score = 32.3 bits (70), Expect = 4.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 170 CYNCNKSGHISRNCP 214
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
>AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein.
Length = 666
Score = 33.1 bits (72), Expect = 2.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 95 CYNCNKTGHIARNCPEGGRDN 157
CYNC + GH+ +NCP + N
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQN 566
Score = 32.3 bits (70), Expect = 4.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 170 CYNCNKSGHISRNCP 214
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
>BC125208-1|AAI25209.1| 926|Homo sapiens KIAA1324 protein protein.
Length = 926
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 89 PSCYNCNKTGHIARNCPEGGR-DNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 253
P + G +CP G D + TC++C + + + P G + C CG PG
Sbjct: 503 PCALEASDVGSSCTSCPAGYYIDRDSGTCHSCPPNTILKAHQPYGVQACVPCG-PG 557
>AY358366-1|AAQ88732.1| 995|Homo sapiens AEPG2426 protein.
Length = 995
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 89 PSCYNCNKTGHIARNCPEGGR-DNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 253
P + G +CP G D + TC++C + + + P G + C CG PG
Sbjct: 590 PCALEASDVGSSCTSCPAGYYIDRDSGTCHSCPPNTILKAHQPYGVQACVPCG-PG 644
>AL356389-3|CAI13598.1| 663|Homo sapiens KIAA1324 protein.
Length = 663
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 89 PSCYNCNKTGHIARNCPEGGR-DNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 253
P + G +CP G D + TC++C + + + P G + C CG PG
Sbjct: 240 PCALEASDVGSSCTSCPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACVPCG-PG 294
>AL356389-2|CAI13597.1| 675|Homo sapiens KIAA1324 protein.
Length = 675
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 89 PSCYNCNKTGHIARNCPEGGR-DNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 253
P + G +CP G D + TC++C + + + P G + C CG PG
Sbjct: 252 PCALEASDVGSSCTSCPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACVPCG-PG 306
>AL356389-1|CAI13596.1| 938|Homo sapiens KIAA1324 protein.
Length = 938
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 89 PSCYNCNKTGHIARNCPEGGR-DNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 253
P + G +CP G D + TC++C + + + P G + C CG PG
Sbjct: 540 PCALEASDVGSSCTSCPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACVPCG-PG 594
>AL138933-5|CAI22280.1| 938|Homo sapiens KIAA1324 protein.
Length = 938
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 89 PSCYNCNKTGHIARNCPEGGR-DNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 253
P + G +CP G D + TC++C + + + P G + C CG PG
Sbjct: 540 PCALEASDVGSSCTSCPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACVPCG-PG 594
>AB037745-1|BAA92562.1| 580|Homo sapiens KIAA1324 protein protein.
Length = 580
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 89 PSCYNCNKTGHIARNCPEGGR-DNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 253
P + G +CP G D + TC++C + + + P G + C CG PG
Sbjct: 166 PCALEASDVGSSCTSCPAGYYIDRDSGTCHSCPPNTILKAHQPYGVQACVPCG-PG 220
>BC113015-1|AAI13016.1| 691|Homo sapiens ZNF180 protein protein.
Length = 691
Score = 31.9 bits (69), Expect = 6.5
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 41 VXXPRAAGNSA-RGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG 193
V P+ + N R P E S Y C++T H + + + R+NS + + CN+ G
Sbjct: 308 VLNPKISHNEQQRIPFEESQYKCSETSH-SSSLTQNMRNNSEEKPFECNQCG 358
>BC033642-1|AAH33642.1| 691|Homo sapiens zinc finger protein 180
protein.
Length = 691
Score = 31.9 bits (69), Expect = 6.5
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 41 VXXPRAAGNSA-RGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG 193
V P+ + N R P E S Y C++T H + + + R+NS + + CN+ G
Sbjct: 308 VLNPKISHNEQQRIPFEESQYKCSETSH-SSSLTQNMRNNSEEKPFECNQCG 358
>AF192913-1|AAF07950.1| 692|Homo sapiens zinc finger protein ZNF180
protein.
Length = 692
Score = 31.9 bits (69), Expect = 6.5
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 41 VXXPRAAGNSA-RGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG 193
V P+ + N R P E S Y C++T H + + + R+NS + + CN+ G
Sbjct: 309 VLNPKISHNEQQRIPFEESQYKCSETSH-SSSLTQNMRNNSEEKPFECNQCG 359
>AC069278-1|AAF71790.1| 692|Homo sapiens ZNF180 protein.
Length = 692
Score = 31.9 bits (69), Expect = 6.5
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 41 VXXPRAAGNSA-RGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG 193
V P+ + N R P E S Y C++T H + + + R+NS + + CN+ G
Sbjct: 309 VLNPKISHNEQQRIPFEESQYKCSETSH-SSSLTQNMRNNSEEKPFECNQCG 359
>U79569-1|AAD00321.1| 269|Homo sapiens no arches protein.
Length = 269
Score = 31.5 bits (68), Expect = 8.6
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 56 AAGNSARGP-DEPSCYNCNKTGHIARNCPEG 145
+AGN P ++ +CY C + GH A C +G
Sbjct: 231 SAGNRGPRPLEQVTCYKCGEKGHYANRCTKG 261
>EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 269
Score = 31.5 bits (68), Expect = 8.6
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 56 AAGNSARGP-DEPSCYNCNKTGHIARNCPEG 145
+AGN P ++ +CY C + GH A C +G
Sbjct: 231 SAGNRGPRPLEQVTCYKCGEKGHYANRCTKG 261
>CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein.
Length = 269
Score = 31.5 bits (68), Expect = 8.6
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 56 AAGNSARGP-DEPSCYNCNKTGHIARNCPEG 145
+AGN P ++ +CY C + GH A C +G
Sbjct: 231 SAGNRGPRPLEQVTCYKCGEKGHYANRCTKG 261
>BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein.
Length = 243
Score = 31.5 bits (68), Expect = 8.6
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 56 AAGNSARGP-DEPSCYNCNKTGHIARNCPEG 145
+AGN P ++ +CY C + GH A C +G
Sbjct: 205 SAGNRGPRPLEQVTCYKCGEKGHYANRCTKG 235
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 31.5 bits (68), Expect = 8.6
Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Frame = +2
Query: 50 PRAAGNSARGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP-DGTK 226
P+ R CYNC H A+ C + C+ C H+ +CP +
Sbjct: 124 PKGKSMQKRRSKGDRCYNCGGLDHHAKECK---LPPQPKKCHFCQSISHMVASCPLKAQQ 180
Query: 227 TCYVCGKPGHISRDCDEERN*HAP 298
GKP + +EE H+P
Sbjct: 181 GPSAQGKPTYFR---EEEEEIHSP 201
>BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 244
Score = 31.5 bits (68), Expect = 8.6
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 56 AAGNSARGP-DEPSCYNCNKTGHIARNCPEG 145
+AGN P ++ +CY C + GH A C +G
Sbjct: 206 SAGNRGPRPLEQVTCYKCGEKGHYANRCTKG 236
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 31.5 bits (68), Expect = 8.6
Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Frame = +2
Query: 50 PRAAGNSARGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP-DGTK 226
P+ R CYNC H A+ C + C+ C H+ +CP +
Sbjct: 124 PKGKSMQKRRSKGDRCYNCGGLDHHAKECK---LPPQPKKCHFCQSISHMVASCPLKAQQ 180
Query: 227 TCYVCGKPGHISRDCDEERN*HAP 298
GKP + +EE H+P
Sbjct: 181 GPSAQGKPTYFR---EEEEEIHSP 201
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 31.5 bits (68), Expect = 8.6
Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Frame = +2
Query: 50 PRAAGNSARGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP-DGTK 226
P+ R CYNC H A+ C + C+ C H+ +CP +
Sbjct: 124 PKGKSMQKRRSKGDRCYNCGGLDHHAKECK---LPPQPKKCHFCQSISHMVASCPLKAQQ 180
Query: 227 TCYVCGKPGHISRDCDEERN*HAP 298
GKP + +EE H+P
Sbjct: 181 GPSAQGKPTYFR---EEEEEIHSP 201
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 31.5 bits (68), Expect = 8.6
Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Frame = +2
Query: 50 PRAAGNSARGPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP-DGTK 226
P+ R CYNC H A+ C + C+ C H+ +CP +
Sbjct: 124 PKGKSMQKRRSKGDRCYNCGGLDHHAKECK---LPPQPKKCHFCQSISHMVASCPLKAQQ 180
Query: 227 TCYVCGKPGHISRDCDEERN*HAP 298
GKP + +EE H+P
Sbjct: 181 GPSAQGKPTYFR---EEEEEIHSP 201
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,620,630
Number of Sequences: 237096
Number of extensions: 2954723
Number of successful extensions: 7301
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 5807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7064
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 23184263682
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -