Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_E04_e413_10.seq
(1530 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0075 + 591537-591618,592410-592648,592840-593037,593129-59... 46 8e-05
12_01_0076 + 627796-627877,628706-628944,629129-629326,629415-62... 45 1e-04
01_01_0462 + 3422352-3422439,3423057-3423241,3423333-3423530,342... 44 3e-04
05_03_0566 - 15521494-15521511,15521550-15521747,15521856-155220... 36 0.064
01_06_1086 - 34421837-34422311,34422426-34422612,34423162-344232... 36 0.11
01_06_1087 - 34430521-34430899,34432336-34432806,34432926-344331... 34 0.26
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912... 33 0.79
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138... 31 2.4
08_01_0081 - 574119-575204,575794-576191,576321-576382,576581-57... 31 3.2
05_01_0273 + 2115257-2115589,2115706-2115766,2115876-2115970,211... 31 3.2
02_05_0336 + 28033315-28033365,28033580-28033585,28033798-280338... 31 3.2
01_06_0158 - 27079262-27079346,27079662-27079750,27080540-270806... 31 3.2
03_01_0480 - 3676529-3676687,3676767-3676931,3677044-3677220,367... 30 5.6
01_05_0795 + 25287449-25287967,25288078-25288138,25288640-252887... 30 5.6
12_02_1041 + 25626210-25626595,25628607-25630542,25630572-25630613 29 7.4
05_06_0133 + 25905455-25905545,25905650-25906202,25906310-259068... 29 7.4
04_01_0387 - 5116673-5117968 29 7.4
09_02_0018 + 3016137-3016186,3016529-3016776,3018717-3018811,302... 29 9.7
01_06_1023 + 33890733-33891034,33891171-33891258,33894253-338945... 29 9.7
01_06_0869 - 32591669-32591794,32591923-32592075,32592293-325923... 29 9.7
>11_01_0075 +
591537-591618,592410-592648,592840-593037,593129-593188,
593313-593456,594655-594819,595611-595709,596057-596125,
596216-596312,596922-597013,597085-597255,598053-598184,
598479-598559,599131-599247,599344-599433
Length = 611
Score = 46.0 bits (104), Expect = 8e-05
Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 1/170 (0%)
Frame = +2
Query: 254 ICKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLADDFVPELVETL 433
+C C ++ +A + L Q+ ++ + +C +KC++ D + LV
Sbjct: 66 LCSACENITSEAVNFLSEKQIQDKIRTILHDTCS--QTFSFEQKCLETMDSYAT-LVFAK 122
Query: 434 ASQMNPNIVCSVAGLCNNYKIDALLFEYNSQKERVVGCNNCQGTVGALRKKFDQTPYE-D 610
+++ P C GLC + ALL S+ C C + + K E +
Sbjct: 123 IAEIKPAAFCKQYGLCRDM---ALLSAVKSEST----CLFCHHIIDEITSKLKDPDAEFE 175
Query: 611 FLVGLLKVCRGMDSLSDSCSMLVFKYYENIVDAVKKDLTPQSICHVSGQC 760
+ LLK C ++ C +V +Y ++ +K L +C + C
Sbjct: 176 IIQLLLKECNKIEGHQQQCKRMVLQYVPLVLVNGEKFLEKNDVCAMIQAC 225
>12_01_0076 +
627796-627877,628706-628944,629129-629326,629415-629474,
629596-629739,631700-631864,632636-632734,633114-633182,
633274-633370,633994-634085,635021-635152,635446-635526,
636284-636400,636497-636598
Length = 558
Score = 45.2 bits (102), Expect = 1e-04
Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 1/170 (0%)
Frame = +2
Query: 254 ICKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLADDFVPELVETL 433
+C C ++ +A + L Q+ + + +C +KC++ D + LV
Sbjct: 66 LCSACENITSEAVNFLSEKQIQDKIMTILHDTCS--QTFSFEQKCLETMDSYAT-LVFAK 122
Query: 434 ASQMNPNIVCSVAGLCNNYKIDALLFEYNSQKERVVGCNNCQGTVGALRKKFDQTPYE-D 610
+++ P+ C GLC + ALL S+ C C + + K E +
Sbjct: 123 IAEIKPDEFCKQYGLCRDM---ALLSAMKSEST----CVFCHHIIDEIMSKLKDPDAEFE 175
Query: 611 FLVGLLKVCRGMDSLSDSCSMLVFKYYENIVDAVKKDLTPQSICHVSGQC 760
+ LLK C ++ C +V +Y ++ +K L +C + C
Sbjct: 176 IIQLLLKECNKIEGHQQQCKRMVLQYVPLVLVNGEKFLEKNDVCAMIQAC 225
>01_01_0462 +
3422352-3422439,3423057-3423241,3423333-3423530,
3423617-3423676,3424022-3424171
Length = 226
Score = 44.0 bits (99), Expect = 3e-04
Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Frame = +2
Query: 254 ICKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLI-PIKVVAKKCMQLADDFVPELVET 430
+C++C +A L+ N TQ ++ + +C + P+K ++C+ L D ++P L
Sbjct: 50 LCQLCEQYSTEALFYLQQNETQTEILSILHHACANVGPLK---QQCITLVDYYIP-LFFL 105
Query: 431 LASQMNPNIVCSVAGLCNNYKIDALLFEYNSQKERVVGCNNCQGTVGALRKKFDQTPYED 610
S + P C LC + S+ + C++ V + K D +
Sbjct: 106 EVSMVTPEKFCESVHLCRK----GTMLRLPSRGDTCGICHHVLVEVLIMLK--DPDMQLE 159
Query: 611 FLVGLLKVCRGMDSLSDSCSMLVFKYYENIVDAVKKDLTPQSICHVSGQC 760
+ LK C D+ C +V +Y I+ +K L +C C
Sbjct: 160 IVEIFLKACSKADNYVQQCKKMVLEYTPLILVKSQKFLETTDVCSTIHAC 209
>05_03_0566 -
15521494-15521511,15521550-15521747,15521856-15522037,
15522643-15522721
Length = 158
Score = 36.3 bits (80), Expect = 0.064
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +2
Query: 254 ICKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLADDFVPELVETL 433
+C+IC + +A L N TQ ++ +C P +C +L D +V L T
Sbjct: 46 LCQICEEFATEALFYLNENETQVEIIATLHQACSKFP--SFKLECTKLVDYYV-SLFFTK 102
Query: 434 ASQMNPNIVCSVAGLCN 484
+ ++P C LC+
Sbjct: 103 VTSLSPEEFCESVSLCH 119
>01_06_1086 -
34421837-34422311,34422426-34422612,34423162-34423291,
34423485-34423720,34423804-34423961,34424048-34424128,
34424216-34424281,34424364-34424432,34424722-34424866,
34425645-34426138,34426244-34426811,34429529-34429574
Length = 884
Score = 35.5 bits (78), Expect = 0.11
Identities = 20/61 (32%), Positives = 38/61 (62%)
Frame = +2
Query: 344 GSCKLIPIKVVAKKCMQLADDFVPELVETLASQMNPNIVCSVAGLCNNYKIDALLFEYNS 523
G+ + + +KV+ + L+ DF+PE V+TL+ + N+V + G C N K AL++++ S
Sbjct: 597 GNGEEVAVKVLRETSRALSKDFLPE-VQTLSKVHHKNLV-TFLGYCLNKKCLALVYDFMS 654
Query: 524 Q 526
+
Sbjct: 655 R 655
>01_06_1087 -
34430521-34430899,34432336-34432806,34432926-34433112,
34433470-34433599,34433794-34434125,34434566-34435050,
34435185-34435752,34436579-34436640,34437569-34437636
Length = 893
Score = 34.3 bits (75), Expect = 0.26
Identities = 17/53 (32%), Positives = 34/53 (64%)
Frame = +2
Query: 359 IPIKVVAKKCMQLADDFVPELVETLASQMNPNIVCSVAGLCNNYKIDALLFEY 517
+ +KV+ + + L+ DF+PE V+ L+ + N+V + G C+N K AL++++
Sbjct: 486 VAVKVLRETSITLSKDFLPE-VQILSKVQHKNLV-TFLGYCHNKKCLALVYDF 536
>01_02_0039 -
10490522-10490606,10490674-10490810,10491107-10491248,
10491355-10491419,10491528-10491641,10491846-10492119,
10492215-10492327,10492405-10492499,10492602-10492662,
10492774-10493103
Length = 471
Score = 32.7 bits (71), Expect = 0.79
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 371 VVAKKCMQLADDFVPELVETLASQMNPNIVCSVAGLC 481
+V+ +C Q+ D+ ++E L +Q +P +CS GLC
Sbjct: 306 IVSMECKQVVRDYGDMILEMLIAQASPMKLCSQIGLC 342
>05_07_0145 +
28012268-28012624,28012734-28012794,28013758-28013852,
28013944-28014056,28014436-28014604,28014677-28014716,
28014797-28014861,28015485-28015598,28015687-28015751,
28015927-28016083,28016167-28016286,28016447-28016535,
28016631-28016715
Length = 509
Score = 31.1 bits (67), Expect = 2.4
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +2
Query: 371 VVAKKCMQLADDFVPELVETLASQMNPNIVCSVAGLC 481
VV+++C + + ++++ L ++ P+ +CS GLC
Sbjct: 315 VVSQECKTVVSQYGQQILDLLLAETQPSKICSQVGLC 351
Score = 29.9 bits (64), Expect = 5.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 653 LSDSCSMLVFKYYENIVDAVKKDLTPQSICHVSGQCT 763
+S C +V +Y + I+D + + P IC G CT
Sbjct: 316 VSQECKTVVSQYGQQILDLLLAETQPSKICSQVGLCT 352
>08_01_0081 -
574119-575204,575794-576191,576321-576382,576581-576653,
576754-576824,576961-577148,577230-577377,577465-577503,
577601-577656,577745-577798,577900-578003,578117-578217,
578726-578796,578912-578968,579306-579422,579653-579682
Length = 884
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 16 AVAAALXTSGIPRAAGNSARGXKTSGTNKH 105
AVAAA+ G+P AA +A+G +G KH
Sbjct: 758 AVAAAMIHEGMPEAAFKTAKGIHDAGWGKH 787
>05_01_0273 +
2115257-2115589,2115706-2115766,2115876-2115970,
2116072-2116184,2116278-2116551,2116923-2117036,
2117169-2117233,2117325-2117466,2117547-2117666,
2118153-2118241,2118349-2118433
Length = 496
Score = 30.7 bits (66), Expect = 3.2
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 371 VVAKKCMQLADDFVPELVETLASQMNPNIVCSVAGLC 481
+++ +C ++ ++ ++ L +Q +P VCS GLC
Sbjct: 307 IISTECKEVVSEYGEMILNLLIAQTDPQKVCSQVGLC 343
>02_05_0336 +
28033315-28033365,28033580-28033585,28033798-28033884,
28034741-28034830,28035736-28037778,28037916-28038062,
28038148-28038560,28038656-28038755
Length = 978
Score = 30.7 bits (66), Expect = 3.2
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +2
Query: 401 DDFVPELVETLASQMNPNIVCSVAGLCNNYKIDALLFEYNSQKERVVGCNNCQGTVGALR 580
D P LVE L + +I C N+ + L S K++ V C+NCQ T G R
Sbjct: 517 DRSYPTLVEALEDKQVHSIACGF-----NFTMAICLHRPLSSKDQSV-CSNCQLTFGFTR 570
Query: 581 KK 586
KK
Sbjct: 571 KK 572
>01_06_0158 -
27079262-27079346,27079662-27079750,27080540-27080659,
27080738-27080894,27081167-27081231,27081323-27081436,
27082109-27082178,27082412-27082642,27082963-27083039,
27083143-27083237,27084514-27084574,27084678-27085073
Length = 519
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 653 LSDSCSMLVFKYYENIVDAVKKDLTPQSICHVSGQCT 763
+S C +V +Y + I+D ++ + P +C G CT
Sbjct: 326 VSQECKAVVSQYGQQILDQLRAETKPAKVCSSVGLCT 362
Score = 30.3 bits (65), Expect = 4.2
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 371 VVAKKCMQLADDFVPELVETLASQMNPNIVCSVAGLC 481
VV+++C + + ++++ L ++ P VCS GLC
Sbjct: 325 VVSQECKAVVSQYGQQILDQLRAETKPAKVCSSVGLC 361
>03_01_0480 -
3676529-3676687,3676767-3676931,3677044-3677220,
3678170-3678273,3678700-3678843,3679831-3679898,
3680059-3680162,3680759-3680767,3681572-3681657,
3681918-3683373
Length = 823
Score = 29.9 bits (64), Expect = 5.6
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +2
Query: 452 NIVCSVAGLCNNYKIDALLFEYNSQKERVV------GCNNCQGTVGALRKKFDQTPYEDF 613
N + + C N I A LF+ ++++ V GC +G +GA R FD+ P +D
Sbjct: 121 NALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCAR-RGDIGAARDLFDECPVKDL 179
Query: 614 L 616
+
Sbjct: 180 V 180
>01_05_0795 +
25287449-25287967,25288078-25288138,25288640-25288734,
25288827-25288939,25289480-25289648,25289777-25289816,
25289906-25289970,25290150-25290263,25290398-25290462,
25290572-25290725,25290798-25290914,25292489-25292545
Length = 522
Score = 29.9 bits (64), Expect = 5.6
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Frame = +2
Query: 371 VVAKKCMQLADDFVPELVETLASQMNPNIVCSVAGLCN-------NYKIDALLFEYNSQK 529
V ++C Q+ E++E L + P VCS GLC + I+++L E +
Sbjct: 369 VANEECKQVVARHGHEMLELLQDKTPPAQVCSKIGLCKSDGAHGISDGIESVLGETHKSA 428
Query: 530 ERV--VGCNNCQGTVGALRKKFDQ 595
+ V CN C+ V ++ +F Q
Sbjct: 429 DEVSDATCNACEMAVTWMQSEFVQ 452
>12_02_1041 + 25626210-25626595,25628607-25630542,25630572-25630613
Length = 787
Score = 29.5 bits (63), Expect = 7.4
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 132 DAPGDLRI--GAVTSARGGNARRHITASHGSGQ 224
D GD R G V RGG R H+ HG+G+
Sbjct: 737 DEAGDERTVGGRVAVVRGGGRREHLEGEHGAGR 769
>05_06_0133 +
25905455-25905545,25905650-25906202,25906310-25906806,
25906905-25907043,25907182-25907253,25907344-25907415,
25907503-25907583,25907899-25908065,25908148-25908416,
25908512-25908638,25908752-25908820,25908928-25909120,
25909215-25909707
Length = 940
Score = 29.5 bits (63), Expect = 7.4
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +2
Query: 359 IPIKVVAKKCMQLADDFVPELVETLASQMNPNIVCSVAGLCNNYKIDALLFEYNSQ---K 529
+ +K+ ++ Q A +F+ E + L + N+V S+ G C + + AL++EY S+ +
Sbjct: 628 VAVKLRSESSNQGAKEFLAE-AQILTRIHHKNLV-SMIGYCKDGEYMALVYEYMSEGTLQ 685
Query: 530 ERVVGCNN 553
E + G NN
Sbjct: 686 EHIAGKNN 693
>04_01_0387 - 5116673-5117968
Length = 431
Score = 29.5 bits (63), Expect = 7.4
Identities = 22/82 (26%), Positives = 33/82 (40%)
Frame = +3
Query: 57 CRXFGTRXXNIWHQQTQXNISSAIFDAPGDLRIGAVTSARGGNARRHITASHGSGQNTYS 236
C F +W +T+ ISS DAP L A NAR+H+ A G N +
Sbjct: 250 CTVFEAVTAALWRSRTRAVISSDDPDAPAPLVFAA-------NARKHVGAKEGYYGNCVT 302
Query: 237 LKILMTFARYARTW*SRHVTNL 302
++ + + +HV L
Sbjct: 303 SQVAVPTSDEVANGDLKHVVRL 324
>09_02_0018 +
3016137-3016186,3016529-3016776,3018717-3018811,
3020025-3020330,3021288-3021336,3021436-3021637,
3023364-3023532,3023605-3023634,3023742-3023807,
3025313-3025378,3029404-3029464,3029592-3029719,
3030716-3030757,3031074-3031190,3031280-3031339
Length = 562
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 636 HTFNKPTKKSS*GVWSNFFLRAPTVP*QLLQPTTRSFCELYSK 508
H +PT+ S WSN++LR QLL TR+ E Y +
Sbjct: 6 HISQEPTRGSRWNRWSNWYLRIVNNRLQLLCQGTRTVDEYYKE 48
>01_06_1023 +
33890733-33891034,33891171-33891258,33894253-33894522,
33894616-33894724,33894833-33894950,33895051-33895183,
33895306-33895493,33895566-33895752,33895797-33895841,
33895850-33895917,33896093-33896186,33896284-33896475,
33896656-33896736,33897363-33897425
Length = 645
Score = 29.1 bits (62), Expect = 9.7
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 443 MNPNIVCSVAGLCNNYKIDALLF--EYNSQKERVVGCNNCQG 562
++PN V SV L N+K+D + F +N ++ V NC+G
Sbjct: 518 VDPNFVSSVEPLLLNHKVDLVFFGHVHNYERTCAVYQGNCKG 559
>01_06_0869 -
32591669-32591794,32591923-32592075,32592293-32592367,
32592467-32592597,32593788-32593896,32594745-32594936
Length = 261
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 551 NCQGTVGALRKKFDQTPYEDFLVGLLKVCR 640
+C+G VG KFD P+ D LV K+CR
Sbjct: 104 SCEGKVG---HKFDMEPHSDNLVNYGKLCR 130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,661,934
Number of Sequences: 37544
Number of extensions: 698398
Number of successful extensions: 1895
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1895
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4919293792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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