Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_E04_e413_10.seq
(1530 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49734| Best HMM Match : SapB_2 (HMM E-Value=0) 82 1e-15
SB_7383| Best HMM Match : SapA (HMM E-Value=1.2e-13) 76 7e-14
SB_52221| Best HMM Match : SapB_2 (HMM E-Value=0.00013) 44 2e-04
SB_15989| Best HMM Match : SapB_2 (HMM E-Value=0.00013) 44 2e-04
SB_10103| Best HMM Match : SapB_2 (HMM E-Value=2.6e-12) 41 0.002
SB_49714| Best HMM Match : RGS (HMM E-Value=6) 36 0.065
SB_53315| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.11
SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0) 33 0.61
SB_43115| Best HMM Match : SapB_1 (HMM E-Value=3.9) 33 0.80
SB_17145| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_25430| Best HMM Match : MFS_1 (HMM E-Value=1.3e-33) 30 4.3
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.6
SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31) 30 5.6
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_28998| Best HMM Match : eIF_4EBP (HMM E-Value=4.5) 29 7.5
SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14) 29 7.5
SB_1948| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_28046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.9
>SB_49734| Best HMM Match : SapB_2 (HMM E-Value=0)
Length = 457
Score = 82.2 bits (194), Expect = 1e-15
Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Frame = +2
Query: 224 KYIFPEDTDDICKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLAD 403
K +P T C +C ++K+ D L N+TQ+++ + E C ++P + KC Q
Sbjct: 208 KATYPVKTSTECVLCEFVMKELDDMLSKNSTQQEIIQAVEKVCSILP-STIKSKCDQFVQ 266
Query: 404 DFVPELVETLASQMNPNIVCSVAGLCNNYKIDALLFEYNSQKERVVG----CNNCQGTVG 571
++ P L+E L +++P +VC+ GLC N + + + V+G C C +
Sbjct: 267 EYGPALIEILEQEVSPKLVCTTLGLCANREHRIAM---RRSHKLVIGSNETCEICTTVMT 323
Query: 572 ALRKKFDQTPYEDFLVGLL-KVCRGMDS-LSDSCSMLVFKYYENIVDAVKKDLTPQSICH 745
L+ + ++ +V L KVC + S ++ C+ +V +Y ++ + + P ++C
Sbjct: 324 YLKAFLNNNATDEEIVNFLEKVCNYLPSQIASECNAIVSEYGSTVLQII-ANTDPTTLCK 382
Query: 746 VSGQCTHRFH 775
G C+ H
Sbjct: 383 EIGLCSANQH 392
Score = 45.6 bits (103), Expect = 1e-04
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 2/173 (1%)
Frame = +2
Query: 251 DICKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLADDFVPELVET 430
D C C ++VK T Q + + + +C + + A +C L + + +++
Sbjct: 23 DECTTCKELVKTIYTMASDPTAQNQILSLIKDACTFLGPE--ASECKSLVETYGKAIIQL 80
Query: 431 LASQM-NPNIVCSVAGLCNNYKIDALLFEYNSQKERVVGCNNCQGTVGALRKKFDQTPYE 607
+ SQ+ NP+ VC GLC + K + L +++V + T + K ++P +
Sbjct: 81 ILSQLSNPDQVCKEIGLCTS-KTEML--------KKIV-MRHLHKT--PITKPVLRSPKD 128
Query: 608 DFLVGLLKVCRGMDSLSDSCSMLVFKYYENIVDAVKKDLTP-QSICHVSGQCT 763
+ + L KVC + +C +V + + IV + L+ + +C G CT
Sbjct: 129 EIVALLSKVCSEFGAEKATCEAVVNTFGKQIVQTLVSLLSDGKKLCTEIGLCT 181
>SB_7383| Best HMM Match : SapA (HMM E-Value=1.2e-13)
Length = 492
Score = 76.2 bits (179), Expect = 7e-14
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Frame = +2
Query: 89 LAPTNTKXHLVGNIRCSWGPSYWCSNFSTGRECKATHHCVSRFWPKYIFPEDTDDICKIC 268
L T VGN RC +GP+YWC + +EC A HC + W KY D C IC
Sbjct: 347 LLAATTHAKFVGNPRCVYGPAYWCRSLEHAQECDAVEHCKNSVW-KY-----NQDTCAIC 400
Query: 269 TDMVKQARDQLESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLADDFVPELVETL-ASQM 445
+V + +D L+ + + +K + + C A +C ++ D + ++ L
Sbjct: 401 EAVVGKVKDALDDKSMEGKVKAILDEICDK-DGGFFAGECKKVVDTYFTMIISQLDIILQ 459
Query: 446 NPNIVCSVAGLCN 484
NP VC+ GLC+
Sbjct: 460 NPKQVCTTLGLCS 472
>SB_52221| Best HMM Match : SapB_2 (HMM E-Value=0.00013)
Length = 290
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +2
Query: 257 CKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLADDFVPELVETLA 436
C CT V +QL S E + F+ CKL+P K+ C+ L ++P++++ +
Sbjct: 39 CVACT-AVAALTNQL-SVIHNETFVKSFDRLCKLLPTKIYQNACLSLGKYYIPKIIDIIT 96
Query: 437 SQMNPNIVCSVAGLC 481
+ +++C LC
Sbjct: 97 DDVTADVICHAIDLC 111
Score = 30.7 bits (66), Expect = 3.2
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +2
Query: 539 VGCNNCQGTVGALRKKFDQTPYEDFLVGLLKVCRGMDS--LSDSCSMLVFKYYENIVDAV 712
V C C V AL + E F+ ++C+ + + ++C L Y I+D +
Sbjct: 37 VYCVACTA-VAALTNQLSVIHNETFVKSFDRLCKLLPTKIYQNACLSLGKYYIPKIIDII 95
Query: 713 KKDLTPQSICHVSGQC 760
D+T ICH C
Sbjct: 96 TDDVTADVICHAIDLC 111
>SB_15989| Best HMM Match : SapB_2 (HMM E-Value=0.00013)
Length = 524
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +2
Query: 257 CKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLADDFVPELVETLA 436
C CT V +QL S E + F+ CKL+P K+ C+ L ++P++++ +
Sbjct: 39 CVACT-AVAALTNQL-SVIHNETFVKSFDRLCKLLPTKIYQNACLSLGKYYIPKIIDIIT 96
Query: 437 SQMNPNIVCSVAGLC 481
+ +++C LC
Sbjct: 97 DDVTADVICHAIDLC 111
Score = 30.7 bits (66), Expect = 3.2
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +2
Query: 539 VGCNNCQGTVGALRKKFDQTPYEDFLVGLLKVCRGMDS--LSDSCSMLVFKYYENIVDAV 712
V C C V AL + E F+ ++C+ + + ++C L Y I+D +
Sbjct: 37 VYCVACTA-VAALTNQLSVIHNETFVKSFDRLCKLLPTKIYQNACLSLGKYYIPKIIDII 95
Query: 713 KKDLTPQSICHVSGQC 760
D+T ICH C
Sbjct: 96 TDDVTADVICHAIDLC 111
>SB_10103| Best HMM Match : SapB_2 (HMM E-Value=2.6e-12)
Length = 105
Score = 41.1 bits (92), Expect = 0.002
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 251 DICKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLADDFVPELVET 430
D C C ++VK T Q + + + +C + + A +C L + + +++
Sbjct: 11 DECTTCKELVKTIYTMASDPTAQNQILSLIKDACTFLGPE--ASECRSLVETYGKAIIQL 68
Query: 431 LASQM-NPNIVCSVAGLCNN 487
+ SQ+ NP+ VC GLC +
Sbjct: 69 ILSQLSNPDQVCKEIGLCTS 88
>SB_49714| Best HMM Match : RGS (HMM E-Value=6)
Length = 167
Score = 36.3 bits (80), Expect = 0.065
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Frame = +2
Query: 137 SWGPSYWCSNFSTGRECKATHHCVSRFWPKYIFPEDTDDICKICTD-----MVKQARDQL 301
S GP W + ++ C+ T+H S I E T+D+ TD + K+ +L
Sbjct: 37 SRGPKLWLLSSASNLTCQLTNHLTSEL-TNDITSELTNDLTMELTDDLTSELTKELTSEL 95
Query: 302 ESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLADDFVPELVETLASQM 445
+ T E K++ K + ++ +L +D EL + L S++
Sbjct: 96 TKDLTSELTKDLTSELTKELTSELTKDLTSELTNDLTSELTKDLTSEL 143
>SB_53315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 303
Score = 35.5 bits (78), Expect = 0.11
Identities = 13/48 (27%), Positives = 30/48 (62%)
Frame = +2
Query: 383 KCMQLADDFVPELVETLASQMNPNIVCSVAGLCNNYKIDALLFEYNSQ 526
+C + + E+++ L+ ++NP++VC+ GLC+ K L+ Y+++
Sbjct: 113 QCASFVNTYEEEVLKILSQELNPDMVCTSLGLCSGVK-QGYLWRYSAR 159
>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 2532
Score = 33.1 bits (72), Expect = 0.61
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 251 DICKICTDMVKQARDQL-ESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLADDFVPE 418
D+ I T VK+ RD L E NTT E++KEV + L + +A + P+
Sbjct: 1278 DVDGITTGQVKKCRDMLKEMNTTVEEMKEVSKAGAGLFKFVIAVMGYCSVAREIKPK 1334
>SB_43115| Best HMM Match : SapB_1 (HMM E-Value=3.9)
Length = 495
Score = 32.7 bits (71), Expect = 0.80
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 260 KICTDMVKQARDQLESNTTQEDLK---EVFEGSCKLIPIKVVAKKCMQLADDFVPELVET 430
+ C +VK A+D ++ TT+ED + + FEG C+ IP A K ++ P LV
Sbjct: 160 EFCEVLVKNAKDFIKFPTTEEDTRAAIDGFEGKCQ-IPQLAGAIKAVRFKIK-APSLVTH 217
Query: 431 LASQMNPNIVC 463
N N+ C
Sbjct: 218 KMKYYNDNLKC 228
>SB_17145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 369
Score = 31.9 bits (69), Expect = 1.4
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +2
Query: 86 HLAPTNTKXHLVGNIRCSWGPSYWCSNFSTGRECKATHHCVSRFWPKYIFPEDTDDICKI 265
H++ NTK ++G R ++ P + C+ F +G +S FW +Y+ P D +IC
Sbjct: 102 HVSDYNTKL-MIG--RPNYSPHFHCTKFESGD--------IS-FWERYLSPADVSNICAK 149
Query: 266 CTDMVKQA 289
T M+ A
Sbjct: 150 DTVMLNDA 157
>SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 31.5 bits (68), Expect = 1.8
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 188 KATHHCVSRFWPKYIFPEDTDDICKICTD--MVKQARDQLES 307
K H R+W K ++ +DTD CK CTD M K ++QL++
Sbjct: 753 KTYHKLRLRYWWKGMY-QDTDHWCKSCTDCSMRKSPKNQLKA 793
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 31.1 bits (67), Expect = 2.4
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +2
Query: 383 KCMQLADDFVPELVETLASQMNPNIVCSVAGLCN 484
KC ++ P ++E L+ + P +VC LC+
Sbjct: 625 KCKTFVQEYTPFIIEILSKEFKPELVCRELKLCS 658
>SB_25430| Best HMM Match : MFS_1 (HMM E-Value=1.3e-33)
Length = 607
Score = 30.3 bits (65), Expect = 4.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 89 LAPTNTKXHLVGNIRCSWGPSYWCSNFSTGRECKATH 199
L P T+ +L G + SWG Y+C + + ++TH
Sbjct: 447 LRPQTTRGYLAGQPKDSWGRGYYCFILAKYQVLESTH 483
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 29.9 bits (64), Expect = 5.6
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 111 NISSAIFDAPGDLRIGAVTSARGGNARRHITASHGSGQNTYSLK-ILMTFARYART 275
++SSA+ + D R G VT A+GGN + S+ S Y+++ ++ + Y R+
Sbjct: 333 SLSSAMNVSSVDTRFGLVTFAQGGNKQVSFDQSYNSSVLEYAIQSVIKSGTEYERS 388
>SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31)
Length = 491
Score = 29.9 bits (64), Expect = 5.6
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Frame = -2
Query: 422 PIPVQSRPLIAYISWRLP*SESAYTSLRKLPLNPPGWYYFQVGHVPASPCP---CISCKC 252
P+P+ SRP+ + P Y L + +N P SPC S
Sbjct: 318 PVPMPSRPVPVPVMVPGPPRIMEYHHLNNIIVNSP---------CEVSPCRNGGTCSAVG 368
Query: 251 HQYLQGICILARTVRRSDV-SPCIPAPC*SYCTNTKVPRSIE 129
++Y + +C L R D+ S C P PC ++ T T+ P E
Sbjct: 369 NEY-RCVCALGYKGDRCDIQSKCFPNPCKNFATCTEHPNDYE 409
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 29.5 bits (63), Expect = 7.5
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -3
Query: 415 RYKVVR*LHTFLGDYLNRNQ-LTRAFENFL*ILLGGITFKLVTCLLHHVRAYLANVISIF 239
RYK F+ + LN Q L RAF F LG ++ L++ +LH + ++ N +++
Sbjct: 2276 RYKATLCATNFVKNVLNFVQDLVRAFHEFQVAKLGHMSLTLISYILHLI--FIVNRVTVL 2333
Query: 238 R 236
R
Sbjct: 2334 R 2334
>SB_28998| Best HMM Match : eIF_4EBP (HMM E-Value=4.5)
Length = 561
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 150 RIGAVTSARGGNARRHITASHGSGQNTYSLKIL 248
R +V+ G ARR++T SG + Y+LK++
Sbjct: 312 RTASVSKINGSVARRNLTTKGDSGPSAYTLKVI 344
>SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14)
Length = 506
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 260 CKCHQYLQGICILARTVRRSDVSPCIPAPC*SYCTNT 150
CKC +G C DV+ C+ PC CTNT
Sbjct: 350 CKCRAGYEGTCC------EKDVNECLRNPCQHTCTNT 380
>SB_1948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 959
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 150 RIGAVTSARGGNARRHITASHGSGQNTYSLKIL 248
R +V+ G ARR++T SG + Y+LK++
Sbjct: 714 RTASVSKINGSVARRNLTTKGDSGPSAYTLKVI 746
>SB_28046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 29.1 bits (62), Expect = 9.9
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 122 GNIRCSWGPSYWCSNFSTGRECKATHHC 205
G++ G SYWC G HHC
Sbjct: 267 GSVNIEDGNSYWCYECKKGYNTSTKHHC 294
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,427,888
Number of Sequences: 59808
Number of extensions: 795229
Number of successful extensions: 2390
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2380
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4976817448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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