Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_E04_e413_10.seq
(1530 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40797-3|AAB37550.2| 238|Caenorhabditis elegans Saposin-like pr... 50 4e-06
U40797-2|AAB37549.2| 429|Caenorhabditis elegans Saposin-like pr... 50 4e-06
U40417-6|AAA81415.2| 90|Caenorhabditis elegans Saposin-like pr... 38 0.014
U64849-5|AAC48055.1| 174|Caenorhabditis elegans Saposin-like pr... 35 0.13
Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical pr... 34 0.23
U40417-4|AAM69087.1| 100|Caenorhabditis elegans Saposin-like pr... 32 1.2
AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like ... 31 2.2
U40417-5|AAM69085.1| 104|Caenorhabditis elegans Saposin-like pr... 31 2.9
AF077542-10|AAC26297.1| 177|Caenorhabditis elegans Hypothetical... 30 3.8
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z74039-2|CAA98501.1| 448|Caenorhabditis elegans Hypothetical pr... 29 8.7
>U40797-3|AAB37550.2| 238|Caenorhabditis elegans Saposin-like
protein family protein10, isoform a protein.
Length = 238
Score = 50.0 bits (114), Expect = 4e-06
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Frame = +2
Query: 257 CKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLADDFVPELVETLA 436
C+ C +++K+ + + E+LK V C+ + + D F+ +L L
Sbjct: 38 CEECENVIKRISEAAKDPKKIEELKIVLGMMCRETSYADECRLFVSQLDKFIDKLQPFLK 97
Query: 437 SQMNPNIVCSVAGLCNNYKIDA---LLFEYNSQKER-----VVGCNNCQGTVGALR---- 580
NP+ VC+ +C+N KID+ +L E+ + ++ + C+ CQ V L+
Sbjct: 98 ---NPHAVCTRLHICSNKKIDSFRRILLEFAKRAQKTFDAPAIVCDECQFVVKELKTVVE 154
Query: 581 KKFDQTPYEDFLVGLLKVCRGMDSLSDSCSMLVFKYYENIV---DAVKKDLTPQSIC 742
K Q DFL VC+ + C ++V +Y + DA+ +D P +C
Sbjct: 155 DKKSQAEARDFL--RENVCKSLGQYRGFCDLVVDEYLPQFIQELDAILQD--PHQVC 207
>U40797-2|AAB37549.2| 429|Caenorhabditis elegans Saposin-like
protein family protein10, isoform b protein.
Length = 429
Score = 50.0 bits (114), Expect = 4e-06
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Frame = +2
Query: 257 CKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLADDFVPELVETLA 436
C+ C +++K+ + + E+LK V C+ + + D F+ +L L
Sbjct: 38 CEECENVIKRISEAAKDPKKIEELKIVLGMMCRETSYADECRLFVSQLDKFIDKLQPFLK 97
Query: 437 SQMNPNIVCSVAGLCNNYKIDA---LLFEYNSQKER-----VVGCNNCQGTVGALR---- 580
NP+ VC+ +C+N KID+ +L E+ + ++ + C+ CQ V L+
Sbjct: 98 ---NPHAVCTRLHICSNKKIDSFRRILLEFAKRAQKTFDAPAIVCDECQFVVKELKTVVE 154
Query: 581 KKFDQTPYEDFLVGLLKVCRGMDSLSDSCSMLVFKYYENIV---DAVKKDLTPQSIC 742
K Q DFL VC+ + C ++V +Y + DA+ +D P +C
Sbjct: 155 DKKSQAEARDFL--RENVCKSLGQYRGFCDLVVDEYLPQFIQELDAILQD--PHQVC 207
>U40417-6|AAA81415.2| 90|Caenorhabditis elegans Saposin-like
protein family protein6 protein.
Length = 90
Score = 38.3 bits (85), Expect = 0.014
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 257 CKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLI--PIKVVAKKCMQLADDFVPELVET 430
C++C VK A + +T D+K+ F+ CK I+ ++C D + +++
Sbjct: 15 CEMCKLAVKSADGDADKDTN--DIKKDFDAKCKKAFHSIQFAPRECEHYVDKKLDPIIKE 72
Query: 431 LASQMNPNIVCSVAGLCN 484
L S +P VC+ G C+
Sbjct: 73 LESGTSPKDVCTKLGECS 90
>U64849-5|AAC48055.1| 174|Caenorhabditis elegans Saposin-like
protein family protein19 protein.
Length = 174
Score = 35.1 bits (77), Expect = 0.13
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Frame = +2
Query: 254 ICKICTDMVKQARDQLE--SNTTQEDLKEVFEGSCKLIP--IKVVAKKCMQLADDFVPE- 418
+C++CT + + QL N + +LK C+ P I +V C L DD +
Sbjct: 79 VCQLCTSGLYLVQSQLLVLENEVKNNLKPFITNVCQSAPTGIPIVKALCDVLKDDLLDAI 138
Query: 419 --LVETLASQMNPNIVCSVAGLCNN 487
L+ + Q +PN VC C +
Sbjct: 139 LTLINGIREQADPNTVCKYIRNCGS 163
>Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical
protein C45G3.1 protein.
Length = 1186
Score = 34.3 bits (75), Expect = 0.23
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 239 EDTDDICKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLADD 406
E + C+ M+K+ D E TQE+ + ++ + +VV KKC QL DD
Sbjct: 105 ESKAEACRNIQKMLKKRSDTSEVENTQENARRRYQRIFEKNDPEVVKKKCKQLLDD 160
>U40417-4|AAM69087.1| 100|Caenorhabditis elegans Saposin-like
protein family protein3 protein.
Length = 100
Score = 31.9 bits (69), Expect = 1.2
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +2
Query: 257 CKICTDMVKQARDQLESNTTQEDLKEVFEGSCK--LIPIKVVAKKCMQLADDFVPELVET 430
C++C VK L +T E +K+ + CK I ++C + D + ++
Sbjct: 26 CEMCKMSVKIVVPMLGEDT--ESIKKAVDAECKKEFHSIPFGTQECKKFIDTKLDPIIHE 83
Query: 431 LASQMNPNIVCSVAGLC 481
L + P+ VC+ G+C
Sbjct: 84 LENGTAPSDVCTKLGMC 100
>AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like
protein family protein7 protein.
Length = 318
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/75 (21%), Positives = 35/75 (46%)
Frame = +2
Query: 257 CKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLIPIKVVAKKCMQLADDFVPELVETLA 436
C C M++ A++ + T++ D+ +C + + +C Q+AD + EL + +
Sbjct: 246 CAFCERMLENAKNY--AVTSKTDITSFANTACASLAKGTTSDQCYQMADKKIAELAKFVD 303
Query: 437 SQMNPNIVCSVAGLC 481
Q+ + C+ C
Sbjct: 304 QQVVDALWCAELNRC 318
>U40417-5|AAM69085.1| 104|Caenorhabditis elegans Saposin-like
protein family protein2 protein.
Length = 104
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +2
Query: 230 IFPEDTDDI-CKICTDMVKQARDQLESNTTQEDLKEVFEGSCKLI--PIKVVAKKCMQLA 400
+ P++ + C++C VK + + T +K+ F+ CK + I ++C
Sbjct: 18 VLPKERSSLGCQMCELAVKTYDGSADKDVTS--IKKDFDTECKKLFHAIPFAPQECEHYV 75
Query: 401 DDFVPELVETLASQMNPNIVCSVAGLC 481
++ + +++ L S P VC G C
Sbjct: 76 NEKLDPIIKELESGTAPKDVCKKLGEC 102
>AF077542-10|AAC26297.1| 177|Caenorhabditis elegans Hypothetical
protein Y57G7A.2 protein.
Length = 177
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 482 NNYKIDALLFEYNSQKERVVGCNNCQGTVGA 574
N +D F+Y +QK+ VV +C GTVG+
Sbjct: 45 NFQHLDFQYFQYQNQKQEVVHGAHCMGTVGS 75
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 29.9 bits (64), Expect = 5.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 695 NIVDAVKKDLTPQSICHVSGQCTHRFHSHGEF 790
N+V A K S CH++G C H GE+
Sbjct: 1057 NMVPAQPKTCVESSDCHINGHCVINEHGAGEY 1088
>Z74039-2|CAA98501.1| 448|Caenorhabditis elegans Hypothetical
protein K03B8.2 protein.
Length = 448
Score = 29.1 bits (62), Expect = 8.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 677 VFKYYENIVDAVKKDLTPQSICHVSGQCTHRFHSHGEFT 793
VF YYEN ++K++L ++ H+S +F T
Sbjct: 95 VFYYYENEFTSLKRELMSYAMAHISSNTCVKFQESNSAT 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,013,438
Number of Sequences: 27780
Number of extensions: 573530
Number of successful extensions: 1474
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4400652752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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