Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_E03_e405_09.seq
         (1525 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    26   0.64 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   4.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   4.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   4.5  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    23   6.0  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   7.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   7.9  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +1

Query: 112 IAIKKNNEIANASEAYEISPRSRVFYLS*LDKLSRTGQKMVFLFKTL 252
           +A K+  ++ N   A  I+P++   ++  + KLSR   +MV LF  +
Sbjct: 189 LAFKQRYQLINEQMAVRINPKNCASFVIEVRKLSRLLGEMVGLFNDI 235


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = +1

Query: 283 CSRAVHQPALRGVSKPSPQLAALTPKVRAFVERSAALCQPDHVH 414
           C     QP +   S     LA +TP V    +  +++C P   H
Sbjct: 113 CESLNTQPPVTSSSNILQNLADITPNVTPNCDVKSSVCSPGSGH 156


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = +1

Query: 283 CSRAVHQPALRGVSKPSPQLAALTPKVRAFVERSAALCQPDHVH 414
           C     QP +   S     LA +TP V    +  +++C P   H
Sbjct: 113 CESLNTQPPVTSSSNILQNLADITPNVTPNCDVKSSVCSPGSGH 156


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = +1

Query: 283 CSRAVHQPALRGVSKPSPQLAALTPKVRAFVERSAALCQPDHVH 414
           C     QP +   S     LA +TP V    +  +++C P   H
Sbjct: 113 CESLNTQPPVTSSSNILQNLADITPNVTPNCDVKSSVCSPGSGH 156


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 858 PLPALCWYRERDTRLAXXPXXVPLSCT 938
           P+P +     +D +LA     VP  CT
Sbjct: 61  PVPIIARQLNQDLKLASGDYTVPAGCT 87


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -3

Query: 473 PCCCISCNKAVASASE-PSHTCT*SG 399
           P  CI CNK+ + A+   +H  T SG
Sbjct: 21  PYRCIDCNKSFSQAANLTAHVRTHSG 46


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -3

Query: 473 PCCCISCNKAVASASE-PSHTCT*SG 399
           P  CI CNK+ + A+   +H  T SG
Sbjct: 277 PYRCIDCNKSFSQAANLTAHVRTHSG 302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,472
Number of Sequences: 336
Number of extensions: 5430
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45783975
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)