Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_E02_e397_10.seq
(1523 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 124 2e-29
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 57 7e-09
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 57 7e-09
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 56 1e-08
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 52 2e-07
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 52 3e-07
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 50 8e-07
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 46 1e-05
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 46 1e-05
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 46 2e-05
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 45 2e-05
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 45 3e-05
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 44 4e-05
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 43 1e-04
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 42 2e-04
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 42 2e-04
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 41 4e-04
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 40 7e-04
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 37 0.006
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 37 0.008
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 36 0.015
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 36 0.019
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 32 0.18
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 30 0.73
SPAC1805.03c |trm13||tRNA 2'-O-methyltransferase Trm13 |Schizosa... 30 0.73
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 29 2.2
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 28 3.0
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 28 3.9
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 3.9
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 27 9.0
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 124 bits (300), Expect = 2e-29
Identities = 76/175 (43%), Positives = 98/175 (56%), Gaps = 5/175 (2%)
Frame = +1
Query: 79 AKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYER 258
AKLY N+ATV ++L + +EA AL +D +Y+K L RAK + L + EEAV+D +
Sbjct: 261 AKLYMNRATVLLRLKRPEEALSDSDNALAIDSSYLKGLKVRAKAHEALEKWEEAVRDVQS 320
Query: 259 LYKIDKS-KETXXXXXXXXXXXXXSKRKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDR 435
++D S SKRKD+YKILGV YRK ALV+HPD+
Sbjct: 321 AIELDASDANLRQELRRLQLELKKSKRKDHYKILGVSKEATDIEIKKAYRKLALVYHPDK 380
Query: 436 HAGAPDTERREQERRFKEVGEAYGILSDPKKRARYDHG-HLD---EDGSGMPDID 588
+AG E E RFKEVGEAY ILSDP+ R R+D G L+ E G+GM D
Sbjct: 381 NAG-----NLEAEARFKEVGEAYTILSDPESRRRFDSGVDLEPGMEGGAGMDPFD 430
Score = 31.5 bits (68), Expect = 0.32
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 91 YNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYERLYKI 270
Y KA V + N + A L L+ V+AL+ R K GE+ +A+ ++ K+
Sbjct: 147 YLKAQVYIFQNDMDRAQKIAHDVLRLNPKNVEALVLRGKVMYYSGENAKAITHFQEALKL 206
Query: 271 D 273
D
Sbjct: 207 D 207
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 56.8 bits (131), Expect = 7e-09
Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 340 DYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQER-RFKEVGEAYGILS 516
D Y +LGV YRK+AL HHPDR D E++ + R F +V AYG+LS
Sbjct: 31 DPYSVLGVEKDASDELIRRAYRKKALQHHPDR---IHDEEKKVEARIEFDKVAIAYGVLS 87
Query: 517 DPKKRARYDH-GHLDE 561
D K+R YD G L E
Sbjct: 88 DKKRRKHYDKTGQLRE 103
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 56.8 bits (131), Expect = 7e-09
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +1
Query: 337 KDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILS 516
+DYY IL + YR+ A+++HPD++ P+ R +F+++ EAY +LS
Sbjct: 8 RDYYDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAR----EKFQKLAEAYQVLS 63
Query: 517 DPKKRARYD 543
DPK R +YD
Sbjct: 64 DPKLREKYD 72
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/79 (37%), Positives = 40/79 (50%)
Frame = +1
Query: 346 YKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSDPK 525
Y IL V Y++ AL+HHPD+ AP E+ E RF+ V EAY IL DP+
Sbjct: 8 YDILEVHFEASAEEIKKSYKRLALLHHPDK---APIHEKEEAAERFRGVQEAYDILKDPE 64
Query: 526 KRARYDHGHLDEDGSGMPD 582
R YD ++ D + D
Sbjct: 65 SREMYDMYGMNSDSNSQFD 83
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/69 (42%), Positives = 37/69 (53%)
Frame = +1
Query: 337 KDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILS 516
KDYY IL + Y+K AL HPDR +P R E +F+ V EAY +LS
Sbjct: 3 KDYYAILNITPKASAEEIKYAYKKAALETHPDR--VSPSARARATE-QFQLVNEAYYVLS 59
Query: 517 DPKKRARYD 543
D +RA+YD
Sbjct: 60 DNSRRAQYD 68
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/68 (35%), Positives = 39/68 (57%)
Frame = +1
Query: 340 DYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSD 519
+YY +LG+ YRK A+ +HPD++ PD + E +F+++ EAY +L D
Sbjct: 8 EYYDLLGISTDATAVDIKKAYRKLAVKYHPDKN---PDDPQGASE-KFQKISEAYQVLGD 63
Query: 520 PKKRARYD 543
K R++YD
Sbjct: 64 EKLRSQYD 71
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 50.0 bits (114), Expect = 8e-07
Identities = 27/71 (38%), Positives = 36/71 (50%)
Frame = +1
Query: 331 KRKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGI 510
K Y++L V YRK AL +HPD++ A D +FKE+ AY I
Sbjct: 3 KETKLYEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGD--------KFKEISRAYEI 54
Query: 511 LSDPKKRARYD 543
L+D +KRA YD
Sbjct: 55 LADEEKRATYD 65
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 46.4 bits (105), Expect = 1e-05
Identities = 26/78 (33%), Positives = 37/78 (47%)
Frame = +1
Query: 346 YKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSDPK 525
Y L V YRK AL +HPD++ E++FKE+ AY +LSDP+
Sbjct: 8 YDCLEVRPEASEAELKKAYRKLALKYHPDKNPNG--------EKKFKEISLAYEVLSDPQ 59
Query: 526 KRARYDHGHLDEDGSGMP 579
+R YD + E + P
Sbjct: 60 RRKLYDQYGITEGNAAPP 77
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/78 (34%), Positives = 38/78 (48%)
Frame = +1
Query: 331 KRKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGI 510
K YY+IL + Y+K AL HPD++ AP + FK V +A+ +
Sbjct: 110 KNHQYYEILDLKKTCTDTEIKKSYKKLALQLHPDKNH-APSADEA-----FKMVSKAFQV 163
Query: 511 LSDPKKRARYDHGHLDED 564
LSDP RA YD +D +
Sbjct: 164 LSDPNLRAHYDRTGMDPE 181
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +1
Query: 340 DYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSD 519
D Y+ILG+ Y++ ++ HPD+ +T R E E+ + E+ AY L+D
Sbjct: 98 DPYEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTD 157
Query: 520 PKKRARY 540
K R Y
Sbjct: 158 DKTRENY 164
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 45.2 bits (102), Expect = 2e-05
Identities = 28/81 (34%), Positives = 38/81 (46%)
Frame = +1
Query: 340 DYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSD 519
DYY ILG Y K L +HPDR+ G E +F+ + +A+ +L D
Sbjct: 12 DYYTILGAESTSSYVEIRQQYLKLVLRYHPDRNPG----REAEVLPQFQLIQKAHEVLKD 67
Query: 520 PKKRARYDHGHLDEDGSGMPD 582
PK R +D L E +G PD
Sbjct: 68 PKLRELFDQRRLLE--AGRPD 86
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 44.8 bits (101), Expect = 3e-05
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +1
Query: 73 HEAKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKD 249
H+ + N+A + ++ S AL LD +YVKAL RR+ Y +LG+ +EA+ D
Sbjct: 182 HDPIFFSNRAACYAAIGDFEQVIKDTSEALSLDSSYVKALNRRSAAYEQLGKLDEALMD 240
Score = 29.1 bits (62), Expect = 1.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 199 RAKCYSELGEHEEAVKDYERLYKIDKS 279
RA CY+ +G+ E+ +KD +D S
Sbjct: 190 RAACYAAIGDFEQVIKDTSEALSLDSS 216
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 44.4 bits (100), Expect = 4e-05
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +1
Query: 340 DYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSD 519
D YK LGV Y K A +HPD + PD ++ +F E+ +AY +L D
Sbjct: 86 DPYKTLGVSKSASASEIKSAYYKLAKQYHPDAN---PDKAAQD---KFVEIKQAYEVLQD 139
Query: 520 PKKRARYD 543
PKK+ +D
Sbjct: 140 PKKKKAFD 147
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 42.7 bits (96), Expect = 1e-04
Identities = 26/75 (34%), Positives = 35/75 (46%)
Frame = +1
Query: 331 KRKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGI 510
K D Y+IL V YRK AL +HPDR+ G D F ++ AY I
Sbjct: 6 KDMDCYEILQVNHDSDLQEIKANYRKLALQYHPDRNPGIED-----YNEIFSQINAAYNI 60
Query: 511 LSDPKKRARYDHGHL 555
LS+ KR ++ +L
Sbjct: 61 LSNDDKRKWHEKDYL 75
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +1
Query: 331 KRKDYYKILGVXXXXXXXXXXX---XYRKRALVHHPDRHAGAPDTERREQERRFKEVGEA 501
K++D+Y +LG+ + K+ L HHPD+ A + + + FK + +A
Sbjct: 94 KQQDHYAVLGLSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNIN---DDSFFKCIQKA 150
Query: 502 YGILSDPKKRARYDHGHLDEDGSGMP 579
Y ILSDP +R ++D +DE+ P
Sbjct: 151 YEILSDPVRRRQFD--SVDENADVEP 174
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +1
Query: 349 KILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSDPKK 528
+ILGV YR+ HPD++ G E + +F E+ +A+ +LSDP++
Sbjct: 10 QILGVSKDASESEIRKAYRQLTKQWHPDKNPG-----NEEAQEKFIEINKAHEVLSDPEQ 64
Query: 529 RARYDHGHLDEDGSGMP 579
R YD + +E +G P
Sbjct: 65 RKIYD-AYGEEGLNGQP 80
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 41.1 bits (92), Expect = 4e-04
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 340 DYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSD 519
+ Y LG+ Y + + + HPDRH ++ E +F+ + AY +LSD
Sbjct: 8 ELYLALGLPKDATSDQIKESYYRLSRLFHPDRHTA---DQKAAAEEKFQIIQHAYEVLSD 64
Query: 520 PKKRARYDH 546
P K+ YD+
Sbjct: 65 PSKKEIYDN 73
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 40.3 bits (90), Expect = 7e-04
Identities = 26/68 (38%), Positives = 34/68 (50%)
Frame = +1
Query: 340 DYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSD 519
DYY IL + Y AL +HPDR+ G D ER +RF+ + A+ +LSD
Sbjct: 12 DYYAILKLQKNATFQQIRKQYLFLALQYHPDRNPG--DEER--AVKRFQRLQLAHEVLSD 67
Query: 520 PKKRARYD 543
KR YD
Sbjct: 68 ATKRLIYD 75
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +1
Query: 340 DYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSD 519
DYY++LG+ +RK +L +HPD++ P + +F + AY L D
Sbjct: 9 DYYELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDP-----KAAEKFHMLQLAYNALID 63
Query: 520 PKKRARYD 543
+ R YD
Sbjct: 64 VQLRKAYD 71
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 36.7 bits (81), Expect = 0.008
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 79 AKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYER 258
A LY N++ +K A S A+E D Y KA RRA + + + +EAV D+ +
Sbjct: 39 AILYSNRSLAHLKSEDYGLAINDASKAIECDPEYAKAYFRRATAHIAIFQPKEAVGDFRK 98
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 35.9 bits (79), Expect = 0.015
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 70 RHEAKLYY-NKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEA 240
R EA + N+A + L+Q EA +AAL++ NY K R+AK + EEA
Sbjct: 105 REEASVMLCNRAAAEIALSQFPEALADANAALKIRNNYGKCYYRKAKALEAMHRIEEA 162
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 35.5 bits (78), Expect = 0.019
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +1
Query: 94 NKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYERLYKID 273
N+A +K+ E C+ A+ELD N+ KA +R+A+ L ++ + + ++D
Sbjct: 438 NRAAAYLKVMAPAECIRDCNKAIELDPNFAKAYVRKAQALFMLKDYNKCIDACNEASEVD 497
Query: 274 K 276
+
Sbjct: 498 R 498
Score = 27.1 bits (57), Expect = 6.8
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = +1
Query: 79 AKLYYNKATVCVKLNQIKEAAGACSAALELD-------ENYVKALLRRAKCYSELGEHEE 237
AK Y KA L + AC+ A E+D +N + + +KC S + +
Sbjct: 467 AKAYVRKAQALFMLKDYNKCIDACNEASEVDRREPNTGKNLREIESQLSKCMSAMASQRQ 526
Query: 238 AVKDYERLYKIDKSKE 285
+ E + +I K E
Sbjct: 527 NETEEETMARIQKDPE 542
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 32.3 bits (70), Expect = 0.18
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +1
Query: 115 KLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYERLYKIDKS 279
KL +E+ + A++ Y + L +AK + +GE EEA+ ++R ++DKS
Sbjct: 377 KLGDYEESNYWLNLAIDHTPTYPELFLAKAKIFLCMGEIEEALCSFKRSVELDKS 431
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 30.3 bits (65), Expect = 0.73
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +1
Query: 343 YYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSDP 522
+Y++L V YRK+++++HPD++ + + + +G IL +
Sbjct: 41 FYELLEVPTKASIKEINRAYRKKSILYHPDKNP--------KSKELYTLLGLIVNILRNT 92
Query: 523 KKRARYDH 546
+ R RYD+
Sbjct: 93 ETRKRYDY 100
>SPAC1805.03c |trm13||tRNA 2'-O-methyltransferase Trm13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 30.3 bits (65), Expect = 0.73
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 296 CCTKRS-WRSKNRSARTITRSWALTNPRQTMTLRKRTG 406
CC WR+ + AR W ++NP++ LR+ TG
Sbjct: 292 CCHHHCRWRTLSTFAREQLSHWGISNPQEFQILRQMTG 329
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1
Query: 400 YRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSDPKKRARY 540
YRK L+ HPD+ P +V EAY +LS K R +Y
Sbjct: 24 YRKALLLFHPDKCKEKPSV-----VYTIDQVKEAYQVLSSEKDRQQY 65
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 28.3 bits (60), Expect = 3.0
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -2
Query: 256 SRNPSPPLRVHRVPNNTWHDAVGLSRSSRLARVRPSKPQRLPLSGSVSRKRSP 98
SR+ SP R +R G + R PS +RL +S SVS RSP
Sbjct: 728 SRSSSPASRKYRSRQRYRRSYAGSTSRGRSFSRSPSYRRRLSMSCSVSYSRSP 780
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +1
Query: 70 RHEAKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKD 249
+ EA+ + + ++A + A+E+D RA Y++LG+ E AV+D
Sbjct: 80 KEEAEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVED 139
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 3.9
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +2
Query: 317 RSKNRSARTITRSWALTNPRQTMTLRKRTGSGLWSTTRTGTQVLRTPSDANRSAGSRKWV 496
RS + T + S+A T P T T + ST T + VL + + S+
Sbjct: 347 RSSKPTDTTNSISFANTTPENTSTQITSPTAVNSSTPITSSSVLNSSTPITSSSILNTST 406
Query: 497 RLTASSVIPRNVPVT 541
+T+SSV+ + P+T
Sbjct: 407 PITSSSVLNSSTPIT 421
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Frame = +1
Query: 346 YKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGA--------PDTERREQERRFKEVGEA 501
Y+IL + Y + HHPD+ A P + E F+ + A
Sbjct: 34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEEYFRLLLAA 93
Query: 502 YGILSDPKKRARYD 543
+LSD ++R YD
Sbjct: 94 NALLSDKRRREEYD 107
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,463,449
Number of Sequences: 5004
Number of extensions: 59552
Number of successful extensions: 335
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 309
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 854316994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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