Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_E02_e397_10.seq
(1523 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 178 8e-45
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 178 8e-45
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 2e-17
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 60 3e-09
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 60 5e-09
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 58 1e-08
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 3e-08
SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30) 57 3e-08
SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 3e-08
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 57 3e-08
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 5e-07
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 53 5e-07
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 5e-07
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 2e-06
SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33) 49 9e-06
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 46 8e-05
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-04
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 44 3e-04
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 44 4e-04
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 44 4e-04
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-04
SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29) 43 6e-04
SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17) 43 6e-04
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 7e-04
SB_39440| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 42 0.001
SB_34109| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 42 0.001
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.003
SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019) 41 0.003
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 41 0.003
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 40 0.007
SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09) 40 0.007
SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.009
SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26) 39 0.009
SB_47290| Best HMM Match : Ank (HMM E-Value=5.4e-29) 39 0.012
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 39 0.012
SB_1408| Best HMM Match : TPR_1 (HMM E-Value=2.6e-05) 38 0.021
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 35 0.20
SB_59121| Best HMM Match : TPR_1 (HMM E-Value=7.4e-10) 35 0.20
SB_23911| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.34
SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10) 33 0.60
SB_666| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.60
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36) 32 1.4
SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10) 32 1.4
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 32 1.4
SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15) 31 2.4
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 31 3.2
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.2
SB_58802| Best HMM Match : Gag_spuma (HMM E-Value=2.7) 30 5.6
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.6
SB_30985| Best HMM Match : DUF1450 (HMM E-Value=1.5) 30 5.6
SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 29 9.8
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 178 bits (434), Expect = 8e-45
Identities = 88/177 (49%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Frame = +1
Query: 79 AKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYER 258
AKLYYN+A V KL + +A C+ A+ LD Y KA L+RA CY E ++EEAV+DYE
Sbjct: 71 AKLYYNRAVVGSKLGKNDQAIEDCTQAMNLDHTYTKAYLKRANCYMESEKYEEAVRDYES 130
Query: 259 LYKIDKS-KETXXXXXXXXXXXXXSKRKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDR 435
L K D+S +E SKRKDYYKIL + Y+K AL HHPDR
Sbjct: 131 LCKKDRSSREFRRLLEKAKLELKKSKRKDYYKILNISKTASEDEIKKAYKKEALKHHPDR 190
Query: 436 HAGAPDTERREQERRFKEVGEAYGILSDPKKRARYDHGHLDEDGSGMPDIDPNVVFQ 606
H+GA D +++ E++FKEV EAY ILSDPKK+ RYD G E+G GM D DPN +FQ
Sbjct: 191 HSGASDEQKKIAEKQFKEVNEAYSILSDPKKKRRYDSGQDLEEGYGMDDFDPNSIFQ 247
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 178 bits (434), Expect = 8e-45
Identities = 88/177 (49%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Frame = +1
Query: 79 AKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYER 258
AKLYYN+A V KL + +A C+ A+ LD Y KA L+RA CY E ++EEAV+DYE
Sbjct: 71 AKLYYNRAVVGSKLGKNDQAIEDCTQAMNLDHTYTKAYLKRANCYMESEKYEEAVRDYES 130
Query: 259 LYKIDKS-KETXXXXXXXXXXXXXSKRKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDR 435
L K D+S +E SKRKDYYKIL + Y+K AL HHPDR
Sbjct: 131 LCKKDRSSREFRRLLEKAKLELKKSKRKDYYKILNISKTASEDEIKKAYKKEALKHHPDR 190
Query: 436 HAGAPDTERREQERRFKEVGEAYGILSDPKKRARYDHGHLDEDGSGMPDIDPNVVFQ 606
H+GA D +++ E++FKEV EAY ILSDPKK+ RYD G E+G GM D DPN +FQ
Sbjct: 191 HSGASDEQKKIAEKQFKEVNEAYSILSDPKKKRRYDSGQDLEEGYGMDDFDPNSIFQ 247
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 88.2 bits (209), Expect = 2e-17
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Frame = +1
Query: 112 VKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYERLYKIDKS-KET 288
+KL +EA C+AAL +DEN V AL RA+ Y + EAV D+++ I++ +
Sbjct: 131 LKLGFSQEAIKECNAALSIDENDVDALCDRAEAYILEEMYNEAVNDFQKAKSINEHLHKV 190
Query: 289 XXXXXXXXXXXXXSKRKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERRE 468
S+++DYYKILG+ YRK A+ HPD + G ++++
Sbjct: 191 QEGLDRAQRLLKQSQKRDYYKILGLKRNCNKREITKAYRKLAVKWHPDNYKG---EDKKK 247
Query: 469 QERRFKEVGEAYGILSDPKKRARYDHG 549
E+ F ++ A +L+DP+KRA+YD G
Sbjct: 248 AEKMFIDIAAAKEVLTDPEKRAKYDAG 274
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 60.5 bits (140), Expect = 3e-09
Identities = 33/81 (40%), Positives = 45/81 (55%)
Frame = +1
Query: 337 KDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILS 516
KDYY +L V YRK+AL +HPD++ +P E + FKE+ EAY +LS
Sbjct: 3 KDYYAVLNVDKAASADDIKKAYRKQALKYHPDKNK-SPGAEEK-----FKEISEAYEVLS 56
Query: 517 DPKKRARYDHGHLDEDGSGMP 579
DPKK+ YD + +E G P
Sbjct: 57 DPKKKEIYDQ-YGEEGLKGTP 76
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 60.1 bits (139), Expect = 5e-09
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +1
Query: 337 KDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILS 516
KDYY+ILGV +RK A+ +HPD++ G ++ E +F+EV EAY +LS
Sbjct: 25 KDYYQILGVPRNASDKQIKKAFRKMAVKYHPDKNKG------KDAEEKFREVAEAYEVLS 78
Query: 517 DPKKRARYD 543
D KR +YD
Sbjct: 79 DENKRRQYD 87
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 58.4 bits (135), Expect = 1e-08
Identities = 31/83 (37%), Positives = 45/83 (54%)
Frame = +1
Query: 340 DYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSD 519
DYY ILG+ YRK +L +HPD++ + E +F++ EAY +LSD
Sbjct: 4 DYYDILGLTRSATDADIKKEYRKLSLKYHPDKN------QEPSAEVKFRQAAEAYDVLSD 57
Query: 520 PKKRARYDHGHLDEDGSGMPDID 588
PKKRA Y+ + SG+P+ D
Sbjct: 58 PKKRAIYNQFGEEGLKSGVPEKD 80
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 57.2 bits (132), Expect = 3e-08
Identities = 28/68 (41%), Positives = 39/68 (57%)
Frame = +1
Query: 340 DYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSD 519
+YY++LGV YR+ AL +HPD++AG E FKEV EAY +L D
Sbjct: 4 NYYEVLGVERNATTDDIRRAYRRLALKYHPDKNAGT--------EENFKEVSEAYEVLCD 55
Query: 520 PKKRARYD 543
P++R R+D
Sbjct: 56 PQQRERFD 63
>SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30)
Length = 238
Score = 57.2 bits (132), Expect = 3e-08
Identities = 29/83 (34%), Positives = 45/83 (54%)
Frame = +1
Query: 334 RKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGIL 513
+K+YY +LGV Y K ++ HHPDRH G+ ++ F+E+ EAY +L
Sbjct: 70 KKNYYNVLGVSPKASQSKIKDAYYKLSMKHHPDRHQGSD-----KKHEVFQEIAEAYSVL 124
Query: 514 SDPKKRARYDHGHLDEDGSGMPD 582
+ + R +YD G L +GS P+
Sbjct: 125 GNLESRKQYDRG-LIVEGSLAPE 146
>SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 57.2 bits (132), Expect = 3e-08
Identities = 29/83 (34%), Positives = 45/83 (54%)
Frame = +1
Query: 334 RKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGIL 513
+K+YY +LGV Y K ++ HHPDRH G+ ++ F+E+ EAY +L
Sbjct: 70 KKNYYNVLGVSPKASQSKIKDAYYKLSMKHHPDRHQGSD-----KKHEVFQEIAEAYSVL 124
Query: 514 SDPKKRARYDHGHLDEDGSGMPD 582
+ + R +YD G L +GS P+
Sbjct: 125 GNLESRKQYDRG-LIVEGSLAPE 146
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 57.2 bits (132), Expect = 3e-08
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +1
Query: 337 KDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILS 516
+DYY++LGV YR++AL HPD++ T R E +FK++ EAY +LS
Sbjct: 3 EDYYEVLGVPRSASEEDVKKAYRRQALRWHPDKNP----TNREHAEEKFKKLSEAYEVLS 58
Query: 517 DPKKRARYD 543
D +KR YD
Sbjct: 59 DKEKRDIYD 67
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 54.4 bits (125), Expect = 2e-07
Identities = 28/69 (40%), Positives = 39/69 (56%)
Frame = +1
Query: 337 KDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILS 516
K+YY ILGV Y+K+A +HPD++ P E + FKE+ EAY +LS
Sbjct: 3 KNYYDILGVKKDASDQELKKAYKKQAFKYHPDKNKD-PGAEEK-----FKEIAEAYEVLS 56
Query: 517 DPKKRARYD 543
DP+KR +D
Sbjct: 57 DPQKREIFD 65
>SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 54.4 bits (125), Expect = 2e-07
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 337 KDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILS 516
K+ Y +LGV YRK +L HPDR A E+ + R+F+ + ++Y ILS
Sbjct: 14 KNLYDVLGVSKTASESEIKRAYRKISLQVHPDR---ADKGEKEKATRKFQALSKSYCILS 70
Query: 517 DPKKRARYDH-GHLDED 564
D +KRA YD G +DE+
Sbjct: 71 DKEKRAIYDESGEIDEE 87
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 53.2 bits (122), Expect = 5e-07
Identities = 31/76 (40%), Positives = 39/76 (51%)
Frame = +1
Query: 331 KRKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGI 510
K YY IL V YRK AL +HPD++ PD + RFK++ +AY +
Sbjct: 62 KETAYYDILNVPPTATATEIKKSYRKLALKYHPDKN---PD-----EGDRFKQISQAYEV 113
Query: 511 LSDPKKRARYDHGHLD 558
LSD KKR YD G D
Sbjct: 114 LSDEKKRKIYDEGGED 129
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 53.2 bits (122), Expect = 5e-07
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +1
Query: 337 KDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILS 516
++YY ILGV YR++AL+ HPD++ + E +FKE+ EAY +L+
Sbjct: 3 RNYYAILGVPRNASDDDIKKAYRRQALIFHPDKN------KNSGAEEKFKEISEAYKVLT 56
Query: 517 DPKKRARYD 543
DP++R +D
Sbjct: 57 DPRQRDIFD 65
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 53.2 bits (122), Expect = 5e-07
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = +1
Query: 334 RKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGIL 513
R+ +Y++LGV YRK AL HPD++ + E R F+E+ +AY +L
Sbjct: 2 RRCHYEVLGVERDVDDSALKKTYRKLALKWHPDKNLDNAE----ESTRVFREIQQAYDVL 57
Query: 514 SDPKKRARYD 543
SDP++RA YD
Sbjct: 58 SDPQERAFYD 67
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 51.2 bits (117), Expect = 2e-06
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 331 KRKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGI 510
+RKDYYKILGV Y + A +HPD + + + +F+EV EAY +
Sbjct: 56 QRKDYYKILGVPPNANQKEIKKAYFELAKKYHPDTN------KDKSASEKFQEVSEAYEV 109
Query: 511 LSDPKKRARYD-HGHLDEDGS 570
LSD KR YD G D G+
Sbjct: 110 LSDDGKRKAYDSFGQTDFSGA 130
>SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33)
Length = 138
Score = 49.2 bits (112), Expect = 9e-06
Identities = 26/60 (43%), Positives = 32/60 (53%)
Frame = +1
Query: 340 DYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSD 519
DYY IL V YRK AL HPD++ + E ER+FKE+ EAY +LSD
Sbjct: 3 DYYDILEVPRSASEQDIKKSYRKLALKWHPDKNP----QNKEEAERKFKEISEAYEVLSD 58
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 46.0 bits (104), Expect = 8e-05
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +1
Query: 337 KDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILS 516
+D+Y ILGV YRK A+ HPD++ P + + +F ++G AY +L+
Sbjct: 24 RDFYAILGVPRDASKNQIKRAYRKLAMKLHPDKNKDDP-----KAQEKFHDIGAAYEVLA 78
Query: 517 DPKKRARYD 543
D +R YD
Sbjct: 79 DDDQRKIYD 87
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 44.8 bits (101), Expect = 2e-04
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +1
Query: 337 KDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILS 516
K+ Y++LG+ Y+K A+ HPDRH + E ++ F E+ EAY ILS
Sbjct: 793 KNSYRVLGLTEDATQEEIKKRYKKLAMKWHPDRHR----DNKEEAQKHFMEIQEAYEILS 848
Query: 517 DPKKRARYDHGHLDED 564
K + + D D
Sbjct: 849 KLKTKRASKNTRTDSD 864
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 44.4 bits (100), Expect = 2e-04
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = +1
Query: 55 GLQXIRHEAKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSEL 222
G++ + + +L+ N+A +KLN+ KEA C + L+L+E++ KAL R+A EL
Sbjct: 890 GIELTKTDHRLFSNRALCHLKLNKPKEALADCESCLKLEEHFGKALQRKAWALHEL 945
>SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 206
Score = 44.0 bits (99), Expect = 3e-04
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 49 SPGLQXIRHEAKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGE 228
S ++ H A Y N++ + ++ +A ++E+D N+VK R AKC+ +G
Sbjct: 58 SKAIEFAPHVATFYGNRSAAYMMISNYDKALEDALLSIEIDNNFVKGHYRAAKCHLAMGS 117
Query: 229 HEEAVKDYERLYKID-KSKE 285
A+++ ++ ++D K+K+
Sbjct: 118 ASNALREIRKVLELDPKNKD 137
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 43.6 bits (98), Expect = 4e-04
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = +1
Query: 346 YKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSDPK 525
Y +LGV YRK A HPD++ PDT + FK++ AY ILSDP+
Sbjct: 7 YDLLGVPQNASDNDIKKAYRKLAKELHPDKN---PDTGEK-----FKDITFAYEILSDPE 58
Query: 526 KRARYD 543
KR YD
Sbjct: 59 KRELYD 64
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 43.6 bits (98), Expect = 4e-04
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = +1
Query: 346 YKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSDPK 525
Y +LGV YRK A HPD++ PDT + FK++ AY ILSDP+
Sbjct: 7 YDLLGVPQNASDNDIKKAYRKLAKELHPDKN---PDTGEK-----FKDITFAYEILSDPE 58
Query: 526 KRARYD 543
KR YD
Sbjct: 59 KRELYD 64
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 43.6 bits (98), Expect = 4e-04
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +1
Query: 88 YYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKD 249
Y N+A ++NQ + + ALEL+ Y KAL+RRA+ +L +E ++D
Sbjct: 183 YQNRAAAYEQMNQFENVVEEATKALELNSKYTKALMRRARALEKLERKQECLQD 236
>SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29)
Length = 291
Score = 43.2 bits (97), Expect = 6e-04
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = +1
Query: 337 KDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILS 516
++YY LGV YRK+AL HPD++ PD + + F ++ +A +L+
Sbjct: 6 ENYYDTLGVHKDSTEKEILKAYRKKALKCHPDKN---PDNPKASE--LFHKLSKALEVLT 60
Query: 517 DPKKRARYDH 546
DPK RA +++
Sbjct: 61 DPKARAAFNN 70
>SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17)
Length = 455
Score = 43.2 bits (97), Expect = 6e-04
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +1
Query: 70 RHEAKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKD 249
+ +A +Y N+A +KL + + A + AL++ N KAL RR++ + G EEA KD
Sbjct: 50 KEKAVIYKNRAACQLKLEKYEAAIKDATKALDIVPNDPKALFRRSQAFEATGRLEEAFKD 109
Query: 250 YERLYKIDKSKE 285
L ++ E
Sbjct: 110 ARTLSHLEPKSE 121
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 42.7 bits (96), Expect = 7e-04
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +1
Query: 88 YYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYERLYK 267
+ N A +KL + AC+ AL++D+ +KAL RR K L ++E++ +D+ ++ +
Sbjct: 1021 HLNIAACHLKLGNNFKCIKACNKALDIDKENIKALFRRGKALLNLKDYEKSKEDFTQVLE 1080
Query: 268 ID-KSKE 285
+D K++E
Sbjct: 1081 LDPKNRE 1087
>SB_39440| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 244
Score = 41.9 bits (94), Expect = 0.001
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +1
Query: 76 EAKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYE 255
E K KA ++ + K+A C AAL+L++N AL+ C +ELG+ E+A Y+
Sbjct: 5 EVKTLLKKARDSIRNKEYKDALKHCKAALKLEKNNYNALVFVGVCATELGQLEQAQAAYK 64
Query: 256 RLYKIDKSK 282
+ D S+
Sbjct: 65 KASDEDPSQ 73
>SB_34109| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 503
Score = 41.9 bits (94), Expect = 0.001
Identities = 16/58 (27%), Positives = 38/58 (65%)
Frame = +1
Query: 73 HEAKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVK 246
++A ++ NKA + L +++EAA AC+ + L ++++A ++ + +LG H++A++
Sbjct: 169 NQAGVWLNKAQSLISLGRLEEAAAACTQVVSLAPSHLEARVQLSSLLQQLGRHDKAIE 226
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 67 IRHEAKLYYNKATVC-VKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAV 243
++ + YY + C +K A + A++LD Y+K RRA LG+ + ++
Sbjct: 216 LKADVPAYYGNRSFCYLKTEYYGLALADANKAIQLDRKYIKGYYRRATANMALGKFKLSL 275
Query: 244 KDYERLYKIDKS 279
KDYE + K S
Sbjct: 276 KDYEMVVKFHPS 287
>SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019)
Length = 94
Score = 40.7 bits (91), Expect = 0.003
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +1
Query: 88 YYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAV 243
Y N A +KL + A C+ AL+LD N KAL RR + + ++EEA+
Sbjct: 43 YLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEEAM 94
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 40.7 bits (91), Expect = 0.003
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +1
Query: 88 YYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAV 243
Y N A +KL + A C+ AL+LD N KAL RR + + ++EEA+
Sbjct: 370 YLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEEAM 421
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 39.5 bits (88), Expect = 0.007
Identities = 25/83 (30%), Positives = 40/83 (48%)
Frame = +1
Query: 334 RKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGIL 513
+ ++Y++LGV YR+ +L HPDR+ + + E +F+++ +L
Sbjct: 2481 KDNFYQVLGVETTATQAEIRRAYRRISLQLHPDRN------KEDDAELKFRKLVAVAEVL 2534
Query: 514 SDPKKRARYDHGHLDEDGSGMPD 582
D KR RYD D GMPD
Sbjct: 2535 KDEDKRKRYDTILRD----GMPD 2553
>SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09)
Length = 372
Score = 39.5 bits (88), Expect = 0.007
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 118 LNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYERLYKIDKS 279
L + E S LE D++ VKAL RRAK + + EEA D++R ++D S
Sbjct: 286 LGEYYEVIKHTSTVLEKDKDNVKALFRRAKAHKACWDPEEARSDFKRAAELDPS 339
Score = 29.1 bits (62), Expect = 9.8
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1
Query: 91 YNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYERLYKI 270
Y +A C++ I+E G ++LD+ + LL ++C LGE+ E +K + +
Sbjct: 244 YAEALGCLEQLSIREKPGD-EEWVKLDQMKIPFLLNFSQCKLLLGEYYEVIKHTSTVLEK 302
Query: 271 DK 276
DK
Sbjct: 303 DK 304
>SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 39.1 bits (87), Expect = 0.009
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 331 KRKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGI 510
K+K++Y+IL V + K+ HPD + PD+ + F +V EAY
Sbjct: 5 KKKNFYEILDVPKDASQTEIKSAFIKKTKEFHPDVNPDDPDS-----HKAFIKVSEAYTT 59
Query: 511 LSDPKKRARYD 543
LS +R +YD
Sbjct: 60 LSSSARRQQYD 70
>SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26)
Length = 211
Score = 39.1 bits (87), Expect = 0.009
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 331 KRKDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGI 510
K+K++Y+IL V + K+ HPD + PD+ + F +V EAY
Sbjct: 66 KKKNFYEILDVPKDASQTEIKSAFIKKTKEFHPDVNPDDPDS-----HKAFIKVSEAYTT 120
Query: 511 LSDPKKRARYD 543
LS +R +YD
Sbjct: 121 LSSSARRQQYD 131
>SB_47290| Best HMM Match : Ank (HMM E-Value=5.4e-29)
Length = 445
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +1
Query: 337 KDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILS 516
+D+Y +L ++K+A HPD+ DT+ E R K+ A +L
Sbjct: 287 EDFYSLLDCGEYATNEQINTEFKKKAKEWHPDKKRN--DTDSHEYFARLKK---ARDVLC 341
Query: 517 DPKKRARYDH 546
D K RA+YDH
Sbjct: 342 DEKMRAKYDH 351
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 38.7 bits (86), Expect = 0.012
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +1
Query: 88 YYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYERLYK 267
Y + V K + ++A + S ALEL L+ R+KCY +LG+++ A +D E +
Sbjct: 19 YLAEGDVLFKQEEYQKALDSYSLALELKPTDPFCLVARSKCYLKLGKNDAAYRDAEAALE 78
Query: 268 IDK 276
DK
Sbjct: 79 EDK 81
Score = 29.5 bits (63), Expect = 7.4
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 112 VKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYERLYKI 270
+KL + A AALE D+++ K L ++A+ +G+ E A+ Y R K+
Sbjct: 61 LKLGKNDAAYRDAEAALEEDKDFNKGLYQKAEALYAMGDFEYALVYYHRGNKL 113
>SB_1408| Best HMM Match : TPR_1 (HMM E-Value=2.6e-05)
Length = 190
Score = 37.9 bits (84), Expect = 0.021
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 148 CSAALELDENYVKALLRRAKCYSELGEHEEAVKDYERLYKID 273
C AL LD +Y KA LRR K S L + E++ D++ +++
Sbjct: 108 CDLALSLDYSYTKAYLRRGKARSHLNKLHESLSDFKEALRLE 149
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 34.7 bits (76), Expect = 0.20
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 151 SAALELDENYVKALLRRAKCYSELGEHEEAVKDYERLYKID 273
+ AL L + VKAL RRA LG+++ A KD L KID
Sbjct: 774 NTALGLQPDNVKALYRRALARKALGKYDTAAKDLLSLVKID 814
>SB_59121| Best HMM Match : TPR_1 (HMM E-Value=7.4e-10)
Length = 154
Score = 34.7 bits (76), Expect = 0.20
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 88 YYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDY 252
Y + V KL + +EA + L+LDE ALLR CY +L + AV+ Y
Sbjct: 3 YIERGKVLEKLKRFEEAIENYTLTLKLDEPTSFALLRIGSCYEKLKNDDLAVQYY 57
>SB_23911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 33.9 bits (74), Expect = 0.34
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +1
Query: 160 LELDENYVKALLRRAKCYSELGEHEEAVKDYERLYKIDKS 279
L+ ++ +KAL RRA+ Y EL E +++ +D E+ ++D +
Sbjct: 146 LQSEDTNIKALYRRAQAYLELDEIDKSREDIEKALQVDSA 185
>SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10)
Length = 466
Score = 33.1 bits (72), Expect = 0.60
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 169 DENYVKALLRRAKCYSELGEHEEAVKDYERLYKIDKSKET 288
DE KA +RR E+ EA+KDYE KID + E+
Sbjct: 410 DEYRCKAYVRRGTAAYHSEEYVEALKDYESALKIDPNNES 449
>SB_666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 33.1 bits (72), Expect = 0.60
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = +1
Query: 70 RHEAKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKD 249
+H +K KAT CV + ++K+A GA S +L + + + A C L + ++ +++
Sbjct: 171 KHPSKSL-EKATACVAIQKVKQANGAASQSLPILRDRAQTFPGIASCV--LDQSQKHIEN 227
Query: 250 YERLYKIDKSKE 285
+RL + D+S E
Sbjct: 228 -KRLARTDRSAE 238
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 32.3 bits (70), Expect = 1.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 340 DYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTER 462
DYY +L V YR+ +++HPD+H P+ +R
Sbjct: 131 DYYAVLAVRKEANEDELKAAYRRLCVLYHPDKHTD-PEKKR 170
>SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36)
Length = 1021
Score = 31.9 bits (69), Expect = 1.4
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 58 LQXIRHEAKLYYNKATVCVKLN--QIKEAAGACSAALELDENYVKALLRRAKCYSELGEH 231
L+ R ++KL + V +++N ++ AAG LD N AL+ RA+CY G+
Sbjct: 324 LRHCRIQSKLR-SACCVDIQINAEKLTRAAGLFKILHVLDNNNTDALVHRAECYELQGKS 382
Query: 232 EEAVKDYERLYKI 270
+A+ Y + ++
Sbjct: 383 AQALDVYNDVVRL 395
>SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10)
Length = 141
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +1
Query: 337 KDYYKILGVXXXXXXXXXXXXYRKRALVHHPDR--HAGAPDTERREQERRFKEVGEAYGI 510
+D +LGV YRK HHPD+ G P +++ +E+ +AY +
Sbjct: 74 EDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYEL 133
Query: 511 LSDPK 525
+ K
Sbjct: 134 IKQQK 138
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 31.9 bits (69), Expect = 1.4
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = +2
Query: 197 VVPSVIRNSVNTKRR*RITRGFTKSTRAKKRNTCCTKRSWRSKNRSARTITRSWA---LT 367
V PS ++ + +KR +R ++S ++ K+ +S + S + +T+S
Sbjct: 990 VSPSAVKRTKGSKRS--ESRSVSRSPERDRKGRDSAKKERQSHSESPQRVTKSSKERPRK 1047
Query: 368 NPRQTMTLRKRTGSGLWSTT--RTGTQVLRTPSDANRSAGSRK 490
PR R+ + S + RT RTP D RS GSR+
Sbjct: 1048 RPRHQSRERRPSSSPPRRSRPQRTSPSPRRTPEDRRRSRGSRR 1090
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 31.9 bits (69), Expect = 1.4
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 85 LYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAV 243
LY N++ C++ Q+++A A EL+ + KA R+ +G H EA+
Sbjct: 58 LYGNRSAACIRTWQLEQALEDGKKAAELNPLWPKAHYRQGVALQCMGRHAEAL 110
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 184 KALLRRAKCYSELGEHEEAVKDYER 258
+A +R +CY LG+ EA++DYE+
Sbjct: 840 RAYGKRGECYHLLGDSNEAIRDYEK 864
>SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15)
Length = 884
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = +1
Query: 73 HEAKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDY 252
H + N V V ++ KEA A + AL L N A A H EA++ Y
Sbjct: 709 HYVTAWVNLGLVLVNTDREKEAESAYNIALSLKPNSADANTNMAHLLRVTNRHMEAIEQY 768
Query: 253 ERLYKIDKS 279
++ + S
Sbjct: 769 KKAISLRPS 777
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/60 (23%), Positives = 31/60 (51%)
Frame = +1
Query: 100 ATVCVKLNQIKEAAGACSAALELDENYVKALLRRAKCYSELGEHEEAVKDYERLYKIDKS 279
+T+ L + E + +E+D + +A C+S EH+ A+K ++R ++D++
Sbjct: 1340 STILWHLQKEVELSSLAHHLVEVDRSSPEAWCATGNCFSLQKEHDTAIKFFQRAVQVDQA 1399
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 30.3 bits (65), Expect = 4.2
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Frame = +2
Query: 287 RNTCCTKRSWRSKNRSARTITRSWALTNPRQTMTLRKRTGSGLW----STTRTGTQVLRT 454
R+T T S + + + R+ + TN T RTGS ST+ T R
Sbjct: 6 RSTPGTTSITTSTSTPSTSTPRAGSTTNTSAPSTSTPRTGSTTTTSAPSTSTTSNSTTRA 65
Query: 455 PSDANRSAGSRKWVRLTASSVIPRNVPVTITDT-STKTDR 571
PS + AGS ++S PR T T ST T R
Sbjct: 66 PSTSTPRAGSTTTTSAPSTST-PRTGSTTTTSAPSTSTPR 104
>SB_58802| Best HMM Match : Gag_spuma (HMM E-Value=2.7)
Length = 810
Score = 29.9 bits (64), Expect = 5.6
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2
Query: 148 KPQRLPLSGSVSRKRSPCCSKVS 80
K PLSG V++KRS CSK+S
Sbjct: 189 KTHETPLSGIVTKKRSQTCSKLS 211
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 29.9 bits (64), Expect = 5.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 337 KDYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTE 459
KD+Y+ LG+ Y+K A++ HPD+ AP +E
Sbjct: 142 KDHYERLGIQQGATKDDINRAYKKLAVLIHPDKSV-APGSE 181
>SB_30985| Best HMM Match : DUF1450 (HMM E-Value=1.5)
Length = 599
Score = 29.9 bits (64), Expect = 5.6
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 191 YCVVPSVIRNSVNTKRR*RITRGFTKSTRAKKRNTCCTKRSWRSKN-RSARTITRSWAL 364
+C +V+ + +++ R+T+G K +CC K S RS N R+ ++ W L
Sbjct: 67 FCYRQNVMPIGIYLRKKTRVTQGACTGFVRKLVGSCCVKLSSRSGNLRAVNSLDALWLL 125
>SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 29.5 bits (63), Expect = 7.4
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +2
Query: 266 KSTRAKKRNTCCTKRSWRSKNRSARTITRSWALTNPRQTMTLRKRT---GSGLWSTTRTG 436
+S +R T S+ R T+T + ++ ++T +RT GS T R+G
Sbjct: 416 RSGSQAERTTSSGSSDKLSRRRGLLTLTLAVPRSSSQRTPRSAQRTPRSGSSAQRTPRSG 475
Query: 437 TQVLRTPSDANRSAGSRK 490
+ V RTP + + G+ K
Sbjct: 476 SSVQRTPRSGSLAQGTPK 493
>SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1671
Score = 29.1 bits (62), Expect = 9.8
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = +1
Query: 340 DYYKILGVXXXXXXXXXXXXYRKRALVHHPDRHAGAPDTERREQERRFKEVGEAYGILSD 519
D Y +L + YR + +HPD+ G P R+F + +AY +SD
Sbjct: 1248 DPYAVLEIDRGASVAEIRRQYRSLSKKYHPDKETGDP--------RKFMRIAKAYEAVSD 1299
Query: 520 PKK 528
K
Sbjct: 1300 FNK 1302
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,299,412
Number of Sequences: 59808
Number of extensions: 488750
Number of successful extensions: 2320
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 2123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2286
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4953341894
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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