Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_E02_e397_10.seq
         (1523 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          28   0.82 
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    27   1.9  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            27   1.9  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    25   5.8  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 27.9 bits (59), Expect = 0.82
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
 Frame = +2

Query: 281 KKRNTCCTKRSWRSKNRS-ARTITRSWALTNPRQTMTLRKRTGSGLWSTTRTGTQVLRTP 457
           KKR++    +S    +RS +R+++RS + +  R + +  + + S   S TRT     RTP
Sbjct: 402 KKRSSRSRSKSLSKSSRSRSRSLSRSVSRSRSRGSRSRSRTSQSRSRSKTRTSRSRSRTP 461

Query: 458 SDANRSAGSRKWVRLTASSVIPRNV 532
             A     +    RLT  ++ P  V
Sbjct: 462 LPARGHVRA----RLTRRTIPPTRV 482


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +1

Query: 49  SPGLQXIRHEAKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAK 207
           S G++  +    L+ N++   + L   +  A  CS ALEL +  V+A  RRA+
Sbjct: 307 SAGIRLTKDYYALFLNRSAAHLALENYQRCAEDCSTALELLQPPVEA-NRRAR 358


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +1

Query: 49  SPGLQXIRHEAKLYYNKATVCVKLNQIKEAAGACSAALELDENYVKALLRRAK 207
           S G++  +    L+ N++   + L   +  A  CS ALEL +  V+A  RRA+
Sbjct: 307 SAGIRLTKDYYALFLNRSAAHLALENYQRCAEDCSTALELLQPPVEA-NRRAR 358


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 352 SCNSPCASIF*APASLRAASV-SFLCSCR 269
           +C  PC+SI+  P+S+R A   +  CS R
Sbjct: 61  TCPVPCSSIWSRPSSMRCAPARTASCSTR 89


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 878,086
Number of Sequences: 2352
Number of extensions: 15004
Number of successful extensions: 49
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 178813800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)