Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_E02_e397_10.seq
         (1523 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           25   2.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        24   4.0  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 261 LQNRQEQRNETLAARSEAGAQKIEAQGLLQDPGR 362
           L +R   RN  L         ++E+QG   DPGR
Sbjct: 109 LHSRLPGRNFNLLRADANSVNELESQGFNYDPGR 142


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +1

Query: 478 RFKEVGEAYGILSDPKKRARYDHGHLDEDGSGMPDI--DPN 594
           RF+EV E YGIL +   + R +   +  D    P +  DPN
Sbjct: 60  RFEEVSEKYGILQNWMDKFRGEEIAILYDPGMFPALLKDPN 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,877
Number of Sequences: 438
Number of extensions: 4374
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 53352750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)