Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_D12_e476_08.seq
(1538 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0857 + 25443251-25444429 31 0.020
06_01_0194 + 1503350-1503554,1504399-1504490,1504835-1504935,150... 33 0.46
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 28 0.63
04_04_0431 + 25155091-25155384 31 1.8
01_06_0398 - 29028530-29028760 31 1.8
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616... 31 2.4
02_03_0390 + 18448671-18448889,18449567-18449632,18449702-184497... 31 2.4
07_01_0368 + 2739908-2740320,2740437-2740816,2740893-2740977,274... 31 3.2
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 30 4.2
01_01_0995 + 7875273-7875495,7876196-7876274,7876422-7876536,787... 30 4.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 4.7
12_01_0021 - 155700-156023 30 5.6
11_01_0023 - 162079-162402 30 5.6
10_08_0959 - 21813756-21814097,21814462-21814570,21814688-218147... 30 5.6
08_01_0059 - 394001-394708 30 5.6
07_03_0544 + 19309026-19310105 30 5.6
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 30 5.6
07_03_1136 + 24218601-24218734,24218769-24219906 29 7.4
>06_03_0857 + 25443251-25444429
Length = 392
Score = 31.5 bits (68), Expect(2) = 0.020
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -3
Query: 1428 AXGPXXRXGEXXGAPXPXXRXAPPXXXPXXPXXDXPPPXP 1309
A GP R G G R A P P + PPP P
Sbjct: 195 ARGPRGRGGGARGRGRSRRRRAAAAAAPSAPASEAPPPPP 234
Score = 25.4 bits (53), Expect(2) = 0.020
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -3
Query: 1194 PPPPAXXXXXGPRXXSXGGGAXRXRRRTXGGG 1099
PPPP+ P GG R R R G G
Sbjct: 232 PPPPSSALVPEPELQVQGGRGERGRGRGRGRG 263
>06_01_0194 + 1503350-1503554,1504399-1504490,1504835-1504935,
1506186-1506276,1506616-1506674,1506764-1506884,
1506959-1507027,1507321-1507373,1507688-1507796,
1507895-1508065,1508148-1508306,1508561-1508650,
1508751-1508933,1509837-1510027,1510340-1510787
Length = 713
Score = 33.5 bits (73), Expect = 0.46
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -3
Query: 1158 RXXSXGGGAXRXRRRTXGGGXXXXXGGGGVQXGXXXGRXR 1039
R GGG R R GGG GGGG + G GR R
Sbjct: 669 RGRGRGGGGGRGRGGGGGGGRGGGGGGGGGRGGRGRGRGR 708
Score = 29.1 bits (62), Expect = 9.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 1143 GGGAXRXRRRTXGGGXXXXXGGGGVQXGXXXG 1048
GG R R R GGG GGGG + G G
Sbjct: 664 GGSRGRGRGRGGGGGRGRGGGGGGGRGGGGGG 695
>08_02_1329 - 26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 27.9 bits (59), Expect(2) = 0.63
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -3
Query: 1194 PPPPAXXXXXGP-RXXSXGGGAXRXRRRTXGGGXXXXXGGGG 1072
PPPPA P + GGG RR GGG GGGG
Sbjct: 86 PPPPAPYAGGSPYHRHAAGGGETPPARR--GGG--RTSGGGG 123
Score = 23.8 bits (49), Expect(2) = 0.63
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = -3
Query: 1389 APXPXXRXAPPXXXPXXPXXDXPPPXP 1309
AP P PP D PPP P
Sbjct: 62 APSPSRAPPPPPSHHERAPSDAPPPPP 88
>04_04_0431 + 25155091-25155384
Length = 97
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3
Query: 1143 GGGAXRXRRRTXGGGXXXXXGGGGV 1069
GG R RRR GGG GGGGV
Sbjct: 46 GGRRRRGRRRGSGGGAVEAEGGGGV 70
>01_06_0398 - 29028530-29028760
Length = 76
Score = 31.5 bits (68), Expect = 1.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 1161 PRXXSXGGGAXRXRRRTXGGGXXXXXGGGG 1072
P + GGG RR+ GGG GGGG
Sbjct: 15 PAMEAEGGGGAEAIRRSHGGGAMDAHGGGG 44
>10_08_0343 - 16960764-16960895,16961166-16961171,16961272-16961640,
16962118-16962304,16962567-16962759,16962864-16963137,
16963215-16963374,16963985-16964199,16964784-16964876,
16965192-16965260,16965293-16965445,16965534-16965737,
16966416-16966691,16967336-16967431,16967585-16967788,
16967877-16968069,16968229-16968374,16968771-16969425,
16971462-16971774,16971989-16972139,16972602-16973815,
16973933-16974182,16974784-16975035
Length = 1934
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 1143 GGGAXRXRRRTXGGGXXXXXGGGGVQXGXXXGRXR 1039
GGG R R GGG GGGG + G G R
Sbjct: 859 GGGPNSQRGRGRGGGGAGRGGGGGGRGGGGRGEQR 893
>02_03_0390 + 18448671-18448889,18449567-18449632,18449702-18449761,
18449864-18449959,18452287-18452447,18452669-18452790,
18452872-18453239,18453653-18453739,18453835-18453969,
18454349-18454471,18454771-18454854,18455023-18455187,
18455310-18455486,18455660-18455773,18455912-18456016,
18457056-18457174,18457244-18457385,18457461-18457555,
18457757-18457862,18458125-18458204,18458285-18458461,
18459828-18459912,18460024-18460104,18460208-18460351,
18460468-18460563,18460654-18460854,18461462-18461895,
18462417-18462478,18462622-18462872,18462956-18463030,
18463110-18463300,18463696-18463867,18463956-18464020,
18464646-18464778,18464861-18464962,18465047-18465130,
18465656-18465730,18465818-18465877,18465967-18466223,
18466560-18466608,18466781-18466941,18467013-18467079,
18467174-18467299,18467422-18467592,18468566-18468769,
18469059-18469165,18469608-18469737,18469774-18469959,
18470704-18470742
Length = 2202
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = -3
Query: 1143 GGGAXRXRRRTXGGGXXXXXGGGGVQXGXXXGRXRPXXPGEKXXIXXEIXX*XAPXGXXS 964
GGG R RR + GGG GGG + G + + G + + + AP
Sbjct: 5 GGGDGRRRRPSAGGGGGGGGRGGGWRSGSSAAKDQRLRLGAEELLESRLG--FAPYTDSE 62
Query: 963 XRMG 952
R+G
Sbjct: 63 RRLG 66
>07_01_0368 + 2739908-2740320,2740437-2740816,2740893-2740977,
2741053-2741167,2741493-2741615
Length = 371
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -3
Query: 1188 PPAXXXXXGPRXXSXGGGAXRXRRRTXGGGXXXXXGGG 1075
PP G R S G GA R + GGG GGG
Sbjct: 50 PPPTAFSYGGRVGSLGLGARRGMSGSSGGGGGRSSGGG 87
>11_06_0561 - 24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 30.3 bits (65), Expect = 4.2
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 1304 GRGXGGGXSLXGXXGXXXGGAXRXXGXGAPXXSPXRXXG 1420
G+G GGG + G G GGA GAP + G
Sbjct: 70 GQGGGGGGPVSGGGGSAPGGAATAPRQGAPPAAATSVQG 108
>01_01_0995 + 7875273-7875495,7876196-7876274,7876422-7876536,
7878507-7878761
Length = 223
Score = 30.3 bits (65), Expect = 4.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 1143 GGGAXRXRRRTXGGGXXXXXGGGGVQXGXXXG 1048
GGG R + GGG GGGG + G G
Sbjct: 2 GGGGGDEREKAKGGGGGGGGGGGGGEYGTFQG 33
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.5 bits (63), Expect = 7.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 1456 PXXXXXGPRPPXPXAXPSPPPXXPG 1530
P PRPP P P PPP G
Sbjct: 354 PPAAPAAPRPPGPGPGPPPPPGAAG 378
Score = 24.6 bits (51), Expect(2) = 4.7
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 1218 AXXRXGXGPPPPAXXXXXGPR 1156
A R G GPPPPA GPR
Sbjct: 376 AAGRGGGGPPPPA--LPGGPR 394
Score = 23.8 bits (49), Expect(2) = 4.7
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -3
Query: 1437 PXXAXGPXXRXGEXXGAPXPXXRXAPPXXXPXXPXXDXPPP 1315
P A P G G P P AP P P PPP
Sbjct: 334 PPPAPSPSA-AGAGSGPPPPPPPAAPAAPRPPGPGPGPPPP 373
>12_01_0021 - 155700-156023
Length = 107
Score = 29.9 bits (64), Expect = 5.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 1164 GPRXXSXGGGAXRXRRRTXGGGXXXXXGGGG 1072
GPR + R RR + GG GGGG
Sbjct: 25 GPRGTAAAAAGMRRRRASTAGGSGGFSGGGG 55
>11_01_0023 - 162079-162402
Length = 107
Score = 29.9 bits (64), Expect = 5.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 1164 GPRXXSXGGGAXRXRRRTXGGGXXXXXGGGG 1072
GPR + R RR + GG GGGG
Sbjct: 25 GPRGTAAAAAGMRRRRASTAGGSGGFSGGGG 55
>10_08_0959 - 21813756-21814097,21814462-21814570,21814688-21814740,
21814849-21815049,21815320-21815433,21815513-21815671,
21816490-21816849,21816928-21817149,21817967-21818093,
21818887-21819023,21819169-21819292,21819665-21820174,
21820255-21820436,21820812-21820862,21821114-21821266,
21821339-21821437,21821519-21821861,21821957-21822030,
21822105-21823025,21823133-21823257,21823419-21823461,
21823574-21823762,21824814-21825074,21825228-21825387,
21826200-21826363,21826523-21827009,21827090-21827431,
21827519-21827836,21828001-21828041,21828136-21828388,
21829158-21829261,21830198-21830386,21830543-21831196,
21831320-21831610,21831739-21831882,21832107-21832205,
21832549-21832657,21832739-21832923,21833008-21833121,
21833270-21833401,21833483-21833815,21833945-21834436,
21834773-21834847,21834917-21835066,21835143-21835241,
21835463-21835547,21837188-21837375,21837513-21837647,
21837729-21837849,21838127-21838194,21838275-21838370,
21838450-21838554,21838665-21838980,21839053-21839142,
21840011-21840181,21840850-21841010,21841088-21841270,
21841839-21841940,21842515-21842632,21842704-21842798,
21842972-21843022,21843107-21843241,21843333-21843436,
21844249-21844414,21844649-21844773,21845220-21845316
Length = 4181
Score = 29.9 bits (64), Expect = 5.6
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 373 ITDDKHLDNRIRLYRLTILINKIVSVMSIFFYYMDMNVYTIPTPNVQFL 519
I DK+ + I L LT+ KI ++ I Y D V+ I N+ FL
Sbjct: 1449 IGGDKNEMSAIHLEILTVTSRKISGILGIVLPYDDYAVFLISVENIYFL 1497
>08_01_0059 - 394001-394708
Length = 235
Score = 29.9 bits (64), Expect = 5.6
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 1419 PXXRXGEXXGAPXPXXRXAPPXXXPXXPXXDXPPPXPRP 1303
P R P P R APP P P PPP PRP
Sbjct: 6 PPRRAPPPPATPPPPPRRAPPPPSP--PIRPPPPPTPRP 42
>07_03_0544 + 19309026-19310105
Length = 359
Score = 29.9 bits (64), Expect = 5.6
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 1292 SXXXGRGXGGGXSLXGXXGXXXGGAXRXXGXGAP 1393
+ G G GGG + G GGA G GAP
Sbjct: 9 TAAAGGGGGGGVAAGRSGGGGGGGAAAAAGAGAP 42
>01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.9 bits (64), Expect = 5.6
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -3
Query: 1203 GXGPPPPAXXXXXGPRXXSXGGGAXRXRRRTXGGGXXXXXGGGGVQXG 1060
G G PP+ G R GGG GGG GGGG G
Sbjct: 370 GQGSLPPSYDGGYGGRPMPGGGGPGAPPPYHGGGGGGGGGGGGGGYTG 417
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.5 bits (63), Expect = 7.4
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -3
Query: 1197 GPPPPAXXXXXGPRXXSXGGGAXRX-RRRTXGGGXXXXXGGGGVQXG 1060
G PP GP GGG R GGG GGGG + G
Sbjct: 170 GRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGGGGGEGG 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,917,457
Number of Sequences: 37544
Number of extensions: 517769
Number of successful extensions: 4782
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4322
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4954100116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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