Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_D10_e460_08.seq
         (1548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   1.3  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    23   9.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   9.3  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    23   9.3  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +1

Query: 1243 GPGPSXRGFIPPGLXGXNXXPXPGTPSREXSP 1338
            G  PS  GF+PP        P    P R  SP
Sbjct: 303  GVYPSTAGFLPPSYHPHQHHPSQYHPHRGSSP 334


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +3

Query: 663 HNFIMLNDLTNIDLLFSEELYANTRFY 743
           HN+I++  L+ +   ++EELY++   Y
Sbjct: 3   HNYIVILILSLLTWTYAEELYSDKYDY 29


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine receptor
            protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +1

Query: 1288 GXNXXPXPGTPSREXSPXPPXPXGXGXXNGIN 1383
            G +  P P +PS   S   P   G     GI+
Sbjct: 86   GGSSSPSPSSPSSFFSSVSPTSLGSENYTGIS 117


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +3

Query: 663 HNFIMLNDLTNIDLLFSEELYANTRFY 743
           HN+I++  L+ +   ++EELY++   Y
Sbjct: 3   HNYIVILILSLLTWTYAEELYSDKYDY 29


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 329,958
Number of Sequences: 438
Number of extensions: 6884
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 54309750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)