Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_D08_e444_08.seq
(1556 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 25 1.5
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 23 6.1
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 23 6.1
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 23 6.1
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 23 6.1
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 23 6.1
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 23 6.1
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 8.1
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 8.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 8.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 8.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 8.1
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 25.0 bits (52), Expect = 1.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 743 WMVYEPVKHIRIATLPGMWERTITVGSAGEN 835
W+ E + RI+ + G+ E T+T + GEN
Sbjct: 198 WIKEESIYEERISVVSGLHEATLTDLALGEN 228
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 23.0 bits (47), Expect = 6.1
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +2
Query: 185 VNLGQGFPDYHAPEHVTKALAD 250
+N G P Y P+H++ + D
Sbjct: 7 MNPGTALPTYQQPQHISGVVVD 28
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 23.0 bits (47), Expect = 6.1
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +2
Query: 185 VNLGQGFPDYHAPEHVTKALAD 250
+N G P Y P+H++ + D
Sbjct: 7 MNPGTALPTYQQPQHISGVVVD 28
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 23.0 bits (47), Expect = 6.1
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -1
Query: 323 NSGLVWDDQSLW 288
N+GLV+D++ LW
Sbjct: 455 NAGLVFDEEKLW 466
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 23.0 bits (47), Expect = 6.1
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 224 EHVTKALADIAVGDNPLLNQY 286
+HV ALA + +G +P+L ++
Sbjct: 341 QHVKSALASVIMGLSPILGRH 361
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 23.0 bits (47), Expect = 6.1
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +2
Query: 185 VNLGQGFPDYHAPEHVTKALAD 250
+N G P Y P+H++ + D
Sbjct: 7 MNPGTALPTYQQPQHISGVVVD 28
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 23.0 bits (47), Expect = 6.1
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +2
Query: 185 VNLGQGFPDYHAPEHVTKALAD 250
+N G P Y P+H++ + D
Sbjct: 7 MNPGTALPTYQQPQHISGVVVD 28
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.6 bits (46), Expect = 8.1
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -1
Query: 203 NLVRDSPLVCIQLLIGYTLPTHSFHRVHTVSVVRIYQTWYQXLVPNXL 60
NL+ L+ L+G+TLP S ++ + + T + LV L
Sbjct: 217 NLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAETL 264
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.6 bits (46), Expect = 8.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 437 TGDEVIVIEPFFDCYDFMIKSA 502
T D V +I +F+C FM+ S+
Sbjct: 267 TSDAVPLIGTYFNCIMFMVASS 288
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 8.1
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -1
Query: 203 NLVRDSPLVCIQLLIGYTLPTHSFHRVHTVSVVRIYQTWYQXLVPNXL 60
NL+ L+ L+G+TLP S ++ + + T + LV L
Sbjct: 217 NLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAETL 264
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 8.1
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -1
Query: 203 NLVRDSPLVCIQLLIGYTLPTHSFHRVHTVSVVRIYQTWYQXLVPNXL 60
NL+ L+ L+G+TLP S ++ + + T + LV L
Sbjct: 217 NLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAETL 264
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.6 bits (46), Expect = 8.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 437 TGDEVIVIEPFFDCYDFMIKSA 502
T D V +I +F+C FM+ S+
Sbjct: 267 TSDAVPLIGTYFNCIMFMVASS 288
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 293,134
Number of Sequences: 336
Number of extensions: 6135
Number of successful extensions: 25
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46910650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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