Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_D08_e444_08.seq
         (1556 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    25   4.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   5.9  

>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -1

Query: 203 NLVRDSPLVCIQLLIGYTLPTHSFHRVHTVSVVRIYQTWYQXLV 72
           NL+    L+    L+G+TLP  S  ++     + + QT +  LV
Sbjct: 237 NLIVPCVLISSMALLGFTLPPDSGEKLTLGLTILVSQTVFSLLV 280


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 896 VPHQXGRPVSPTGLPAGNRERFPPL 822
           +P   GR +SP+   AG   R PP+
Sbjct: 668 LPSATGRDISPSASAAGLTTRSPPI 692


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,316,599
Number of Sequences: 2352
Number of extensions: 25363
Number of successful extensions: 67
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 183284145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)