Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_D08_e444_08.seq
(1556 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical pr... 241 1e-63
Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical pr... 241 1e-63
AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical ... 235 6e-62
Z81081-1|CAB03090.1| 464|Caenorhabditis elegans Hypothetical pr... 66 8e-11
AF000195-6|AAO61435.1| 350|Caenorhabditis elegans Hypothetical ... 49 1e-05
AF000195-5|AAC24265.2| 504|Caenorhabditis elegans Hypothetical ... 49 1e-05
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 33 0.72
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 33 0.72
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 32 1.3
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 31 2.9
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 31 2.9
U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin st... 30 5.1
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 30 5.1
AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin ... 30 5.1
U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 29 8.9
>Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical
protein R03A10.4b protein.
Length = 424
Score = 241 bits (589), Expect = 1e-63
Identities = 116/242 (47%), Positives = 171/242 (70%), Gaps = 3/242 (1%)
Frame = +2
Query: 137 SVWVEYIQLAAEYKPAVNLGQGFPDYHAPEHVTKALADIAVGDN-PLLNQYTRGFGHPRL 313
S+WVE+ LAAE K AVNLGQGFPD AP+ VT L +++ +QYTRG+GHP L
Sbjct: 19 SIWVEFTTLAAETK-AVNLGQGFPDSPAPKFVTDLLENLSKHPELTAAHQYTRGYGHPML 77
Query: 314 VQNLSKVYSPLIGREIDPFNEILVTSGAYEALFSAILGHVDTGDEVIVIEPFFDCYDFMI 493
V L+K+YS ++DP NE+LVT GAY +L+ A LG V+ GDEV++IEP +DCY +
Sbjct: 78 VDILAKMYSHFYNVQVDPMNEVLVTVGAYLSLYYAFLGWVNKGDEVLIIEPAYDCYYPQV 137
Query: 494 KSAGGVPKFIALKPKVSSGTITSADWVLDESELVSLFTSKTKMIILNTPHNPLGKAFTRQ 673
K AGGVP + + ++ G +++ + +D +++ S KTKM+++N PHNP GK F+R
Sbjct: 138 KFAGGVPVPVVMN--LAEGATSASQFTIDFADMESKINEKTKMLVINNPHNPTGKLFSRH 195
Query: 674 ELELIADLCKKHNVLCLSDEVYEWMVYEPVKHIRIATLPGMWERTITVGSAGE--NVLGY 847
ELE +A++ KKHN++ ++DEVYE+ V++ +R A+LPGM+ERTI++GSAG+ +V G+
Sbjct: 196 ELEKLAEIAKKHNLIVIADEVYEFHVWDKNDMVRFASLPGMYERTISIGSAGKAFSVTGW 255
Query: 848 RL 853
+L
Sbjct: 256 KL 257
Score = 50.8 bits (116), Expect = 3e-06
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = +3
Query: 828 GKTFSVTGWKTRWAYGPAXLMRNLQXGHXNXVYPCCXPVQ 947
GK FSVTGWK WA GP L+ L+ H N V+ C P Q
Sbjct: 247 GKAFSVTGWKLGWAVGPKQLLEPLKAIHQNCVFTCSTPTQ 286
>Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical
protein R03A10.4a protein.
Length = 441
Score = 241 bits (589), Expect = 1e-63
Identities = 116/242 (47%), Positives = 171/242 (70%), Gaps = 3/242 (1%)
Frame = +2
Query: 137 SVWVEYIQLAAEYKPAVNLGQGFPDYHAPEHVTKALADIAVGDN-PLLNQYTRGFGHPRL 313
S+WVE+ LAAE K AVNLGQGFPD AP+ VT L +++ +QYTRG+GHP L
Sbjct: 36 SIWVEFTTLAAETK-AVNLGQGFPDSPAPKFVTDLLENLSKHPELTAAHQYTRGYGHPML 94
Query: 314 VQNLSKVYSPLIGREIDPFNEILVTSGAYEALFSAILGHVDTGDEVIVIEPFFDCYDFMI 493
V L+K+YS ++DP NE+LVT GAY +L+ A LG V+ GDEV++IEP +DCY +
Sbjct: 95 VDILAKMYSHFYNVQVDPMNEVLVTVGAYLSLYYAFLGWVNKGDEVLIIEPAYDCYYPQV 154
Query: 494 KSAGGVPKFIALKPKVSSGTITSADWVLDESELVSLFTSKTKMIILNTPHNPLGKAFTRQ 673
K AGGVP + + ++ G +++ + +D +++ S KTKM+++N PHNP GK F+R
Sbjct: 155 KFAGGVPVPVVMN--LAEGATSASQFTIDFADMESKINEKTKMLVINNPHNPTGKLFSRH 212
Query: 674 ELELIADLCKKHNVLCLSDEVYEWMVYEPVKHIRIATLPGMWERTITVGSAGE--NVLGY 847
ELE +A++ KKHN++ ++DEVYE+ V++ +R A+LPGM+ERTI++GSAG+ +V G+
Sbjct: 213 ELEKLAEIAKKHNLIVIADEVYEFHVWDKNDMVRFASLPGMYERTISIGSAGKAFSVTGW 272
Query: 848 RL 853
+L
Sbjct: 273 KL 274
Score = 50.8 bits (116), Expect = 3e-06
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = +3
Query: 828 GKTFSVTGWKTRWAYGPAXLMRNLQXGHXNXVYPCCXPVQ 947
GK FSVTGWK WA GP L+ L+ H N V+ C P Q
Sbjct: 264 GKAFSVTGWKLGWAVGPKQLLEPLKAIHQNCVFTCSTPTQ 303
>AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical
protein F28H6.3 protein.
Length = 437
Score = 235 bits (575), Expect = 6e-62
Identities = 119/252 (47%), Positives = 175/252 (69%), Gaps = 3/252 (1%)
Frame = +2
Query: 122 GPGEKSVWVEYIQLAAEYKPAVNLGQGFPDYHAPEHVTKALADIAVGDNPL-LNQYTRGF 298
G ++S+WVE+ +LA E K AV+LGQGFPD AP+ VT+ L DIA + +QYTR F
Sbjct: 14 GEHQESIWVEFGKLAIENK-AVSLGQGFPDSPAPKFVTEILKDIASHPEKIESHQYTRAF 72
Query: 299 GHPRLVQNLSKVYSPLIGREIDPFNEILVTSGAYEALFSAILGHVDTGDEVIVIEPFFDC 478
GHP LV LSK+YS G ++ ++IL+T GAY AL+ + LG + GDEVI+IEP FDC
Sbjct: 73 GHPDLVGILSKIYSYFYGVNVNATDDILITVGAYNALYYSFLGWISKGDEVIIIEPAFDC 132
Query: 479 YDFMIKSAGGVPKFIALKPKVSSGTITSADWVLDESELVSLFTSKTKMIILNTPHNPLGK 658
Y +K AGG P I++ K+ G+ +++ + +D EL +TKMI++N PHNP GK
Sbjct: 133 YFPQVKFAGGTP--ISVVMKLKEGSKSASQFTIDFEELEKKINKRTKMIVINNPHNPTGK 190
Query: 659 AFTRQELELIADLCKKHNVLCLSDEVYEWMVYEPVKHIRIATLPGMWERTITVGSAGE-- 832
F+R+EL+ IA+L + ++++ ++DEVYE+ V +P + IR A+LPGM+ERTI++GSAG+
Sbjct: 191 LFSREELQHIAELARNYDLIVVADEVYEFHVSQPKEMIRFASLPGMYERTISIGSAGKAL 250
Query: 833 NVLGYRLEDPLG 868
+V G++L +G
Sbjct: 251 SVTGWKLGWAIG 262
Score = 46.4 bits (105), Expect = 5e-05
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3
Query: 828 GKTFSVTGWKTRWAYGPAXLMRNLQXGHXNXVYPCCXPVQ 947
GK SVTGWK WA GP L+ L+ N VY C P+Q
Sbjct: 247 GKALSVTGWKLGWAIGPQHLLSPLKTISQNCVYTCPTPIQ 286
>Z81081-1|CAB03090.1| 464|Caenorhabditis elegans Hypothetical
protein F42D1.2 protein.
Length = 464
Score = 65.7 bits (153), Expect = 8e-11
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Frame = +2
Query: 371 NEILVTSGAYEALFSAILGHVDTGDEVIVIEPFFDCYDFMIKSAGGVPKFIALKP-KVSS 547
+++++ SG AL AI + G+ ++V P F Y + + P I KP K+
Sbjct: 139 DDVVLASGCSHALQMAIEAVANAGENILVPHPGFPLYSTLCR-----PHNIVDKPYKID- 192
Query: 548 GTITSADWVLDESELVSLFTSKTKMIILNTPHNPLGKAFTRQELELIADLCKKHNVLCLS 727
+T D +D S + ++ TK II+N P NP G FT++ LE I ++ ++ ++
Sbjct: 193 --MTGEDVRIDLSYMATIIDDNTKAIIVNNPGNPTGGVFTKEHLEEILAFAHQYKLIIIA 250
Query: 728 DEVYEWMVYEPVKHIRIATL 787
DE+Y +VY +A+L
Sbjct: 251 DEIYGDLVYNGATFYPLASL 270
>AF000195-6|AAO61435.1| 350|Caenorhabditis elegans Hypothetical
protein C32F10.8b protein.
Length = 350
Score = 48.8 bits (111), Expect = 1e-05
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Frame = +2
Query: 560 SADWVLDESELVSLFTSKTK-----MIILNTPHNPLGKAFTRQELELIADLCKKHNVLCL 724
S++W +DE+EL F K ++ + P NP G+A +R+ +E I +K N+ +
Sbjct: 220 SSNWSMDEAELERSFNDHCKEYDIRVLCIINPGNPTGQALSRENIETIIKFAQKKNLFLM 279
Query: 725 SDEVYEWMVY 754
+DEVY+ VY
Sbjct: 280 ADEVYQDNVY 289
>AF000195-5|AAC24265.2| 504|Caenorhabditis elegans Hypothetical
protein C32F10.8a protein.
Length = 504
Score = 48.8 bits (111), Expect = 1e-05
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Frame = +2
Query: 560 SADWVLDESELVSLFTSKTK-----MIILNTPHNPLGKAFTRQELELIADLCKKHNVLCL 724
S++W +DE+EL F K ++ + P NP G+A +R+ +E I +K N+ +
Sbjct: 220 SSNWSMDEAELERSFNDHCKEYDIRVLCIINPGNPTGQALSRENIETIIKFAQKKNLFLM 279
Query: 725 SDEVYEWMVY 754
+DEVY+ VY
Sbjct: 280 ADEVYQDNVY 289
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 32.7 bits (71), Expect = 0.72
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 593 VSLFTSKTKMIILNTPHNPLGKAFTRQELELIADLCKKHNVLCLSDEVYEWMVYE 757
++L + + +II+N PHNPLG F +++ + + N+ + DEV+ V++
Sbjct: 3268 IALENTVSGVIIVN-PHNPLGVTFPPEQVISLCNWASSKNLRVVIDEVFANSVFD 3321
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 32.7 bits (71), Expect = 0.72
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 593 VSLFTSKTKMIILNTPHNPLGKAFTRQELELIADLCKKHNVLCLSDEVYEWMVYE 757
++L + + +II+N PHNPLG F +++ + + N+ + DEV+ V++
Sbjct: 3268 IALENTVSGVIIVN-PHNPLGVTFPPEQVISLCNWASSKNLRVVIDEVFANSVFD 3321
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 31.9 bits (69), Expect = 1.3
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 611 KTKMIILNTPHNPLGKAFTRQELELIADLCKKHNVLCLSDEVYE 742
K+ +I+ HNP G T+++ +L+A++ K+ N+ D Y+
Sbjct: 176 KSVIILHGCAHNPTGMDPTQEQWKLVAEVIKRKNLFTFFDIAYQ 219
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +2
Query: 677 LELIADLCKKHNVLCLSDEV 736
L+ ++DLCKK+NVL ++DEV
Sbjct: 227 LKGVSDLCKKYNVLFITDEV 246
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +2
Query: 677 LELIADLCKKHNVLCLSDEV 736
L+ ++DLCKK+NVL ++DEV
Sbjct: 162 LKGVSDLCKKYNVLFITDEV 181
>U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 5 protein.
Length = 1603
Score = 29.9 bits (64), Expect = 5.1
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 431 VDTGDEVIVIEPFFDCYDFMIKSAGGVPKFIALKPKVSSGTITSADWVLDESELVSLFTS 610
V T D VI P CY + K P+F L K++ + V+ E + + S
Sbjct: 1315 VSTFDNVIYRAPLTTCYSLVAKDCSEQPRFAVLAKKINKNSEELLVKVVRREEEIVVKKS 1374
Query: 611 KTKMII 628
K ++
Sbjct: 1375 DDKFLV 1380
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 29.9 bits (64), Expect = 5.1
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 431 VDTGDEVIVIEPFFDCYDFMIKSAGGVPKFIALKPKVSSGTITSADWVLDESELVSLFTS 610
V T D VI P CY + K P+F L K++ + V+ E + + S
Sbjct: 1315 VSTFDNVIYRAPLTTCYSLVAKDCSEQPRFAVLAKKINKNSEELLVKVVRREEEIVVKKS 1374
Query: 611 KTKMII 628
K ++
Sbjct: 1375 DDKFLV 1380
>AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 4 protein.
Length = 1603
Score = 29.9 bits (64), Expect = 5.1
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 431 VDTGDEVIVIEPFFDCYDFMIKSAGGVPKFIALKPKVSSGTITSADWVLDESELVSLFTS 610
V T D VI P CY + K P+F L K++ + V+ E + + S
Sbjct: 1315 VSTFDNVIYRAPLTTCYSLVAKDCSEQPRFAVLAKKINKNSEELLVKVVRREEEIVVKKS 1374
Query: 611 KTKMII 628
K ++
Sbjct: 1375 DDKFLV 1380
>U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical
protein C14F11.1a protein.
Length = 414
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 641 HNPLGKAFTRQELELIADLCKKHNVLCLSDEVYE 742
HNP G +R + + I+D+ KK N+ D Y+
Sbjct: 198 HNPTGVDPSRDQWKKISDIVKKRNLFVFFDMAYQ 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,462,427
Number of Sequences: 27780
Number of extensions: 587438
Number of successful extensions: 1284
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4494062834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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