Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_D07_e436_07.seq
(1488 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 243 3e-64
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 243 3e-64
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 241 8e-64
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 200 2e-51
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 200 2e-51
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 158 9e-39
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 128 6e-38
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 7e-16
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 81 2e-15
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 81 3e-15
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 5e-15
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 7e-15
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 79 7e-15
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 79 7e-15
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 79 7e-15
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 79 9e-15
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 2e-14
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 2e-14
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-14
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 75 1e-13
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 69 1e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 67 3e-11
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 60 6e-09
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 4e-06
SB_37070| Best HMM Match : Vicilin_N (HMM E-Value=4.8) 33 0.59
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 33 0.59
SB_48462| Best HMM Match : zf-C2H2 (HMM E-Value=1.1e-18) 32 1.4
SB_47086| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_45838| Best HMM Match : Sigma70_r1_1 (HMM E-Value=2.6) 31 1.8
SB_6617| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_46547| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.5
SB_16010| Best HMM Match : Ribosomal_L6e_N (HMM E-Value=1.9) 30 5.5
SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.2
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 243 bits (594), Expect = 3e-64
Identities = 110/124 (88%), Positives = 121/124 (97%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELF 258
GRMSMKEVDEQML++QNKNSSYFVEWIPNNVKTAVCDIPP+GLKMS+TFIGN+TAIQELF
Sbjct: 319 GRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELF 378
Query: 259 KRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQ 438
KRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQDATAE++ EFD+
Sbjct: 379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDE 438
Query: 439 EDME 450
E+ E
Sbjct: 439 EEEE 442
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 243 bits (594), Expect = 3e-64
Identities = 110/124 (88%), Positives = 121/124 (97%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELF 258
GRMSMKEVDEQML++QNKNSSYFVEWIPNNVKTAVCDIPP+GLKMS+TFIGN+TAIQELF
Sbjct: 319 GRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELF 378
Query: 259 KRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQ 438
KRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQDATAE++ EFD+
Sbjct: 379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDE 438
Query: 439 EDME 450
E+ E
Sbjct: 439 EEEE 442
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 241 bits (591), Expect = 8e-64
Identities = 109/124 (87%), Positives = 121/124 (97%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELF 258
GRMSMKE+DEQML++QNKNSSYFVEWIPNNVKTAVCDIPP+GLKMS+TFIGN+TAIQELF
Sbjct: 264 GRMSMKELDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELF 323
Query: 259 KRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQ 438
KRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQDATAE++ EFD+
Sbjct: 324 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDE 383
Query: 439 EDME 450
E+ E
Sbjct: 384 EEEE 387
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 200 bits (489), Expect = 2e-51
Identities = 88/119 (73%), Positives = 105/119 (88%)
Frame = +1
Query: 100 VDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQF 279
VDEQML+ QNKNS +FVEWIPNNVKT VCDI PKGLKM++TF+GN TAIQELFKR+ EQF
Sbjct: 153 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQF 212
Query: 280 SAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEEL 456
+AMFRRKAFLHWYTGEGMDEMEF EAESN++DL++EYQQYQ+A A+ + E E++ E+
Sbjct: 213 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQEAEADIEGEVSDEELPEV 271
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 200 bits (488), Expect = 2e-51
Identities = 88/118 (74%), Positives = 104/118 (88%)
Frame = +1
Query: 100 VDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQF 279
VDEQML+ QNKNS +FVEWIPNNVKT VCDI PKGLKM++TF+GN TAIQELFKR+ EQF
Sbjct: 91 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQF 150
Query: 280 SAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEE 453
+AMFRRKAFLHWYTGEGMDEMEF EAESN++DL++EYQQYQ+A A+ + E E++ E
Sbjct: 151 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQEAEADIEGEVSDEELPE 208
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 158 bits (384), Expect = 9e-39
Identities = 74/133 (55%), Positives = 97/133 (72%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELF 258
G MSMKEV++QM Q++ SS FV+WIPNN K AVCD+PP +KMS++ I + TAIQELF
Sbjct: 224 GLMSMKEVEDQMAFAQDRYSSLFVDWIPNNGKVAVCDVPPHDMKMSASCISSNTAIQELF 283
Query: 259 KRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQ 438
KRI + MFRR+AFLHWYT EGMD +F EA++++ DL+S YQQ +D AED FD
Sbjct: 284 KRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLISTYQQCEDMKAEDC--FDD 341
Query: 439 EDMEELAQDEHHD 477
ED++ + +E D
Sbjct: 342 EDIKLIEFEEFED 354
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 128 bits (310), Expect(2) = 6e-38
Identities = 55/81 (67%), Positives = 69/81 (85%)
Frame = +1
Query: 124 QNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKA 303
Q+ +SS FVEWIPNN+KTAVCD+PP GLK ++TF+ N+TAIQE F+R +EQF+AMFRR+A
Sbjct: 153 QDSHSSSFVEWIPNNMKTAVCDVPPVGLKNAATFLYNSTAIQEAFRRFTEQFAAMFRRRA 212
Query: 304 FLHWYTGEGMDEMEFNEAESN 366
FLHWYT EGMD +EF E + N
Sbjct: 213 FLHWYTTEGMDPLEFTEIKRN 233
Score = 48.4 bits (110), Expect(2) = 6e-38
Identities = 21/38 (55%), Positives = 30/38 (78%), Gaps = 2/38 (5%)
Frame = +1
Query: 355 AESNVNDLVSEYQQYQDATAEDD--TEFDQEDMEELAQ 462
A+SN+NDL+SEYQQY+DA ++DD T D+E+ EE +
Sbjct: 259 ADSNLNDLISEYQQYEDAKSDDDVITASDEEEAEEFVE 296
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 82.6 bits (195), Expect = 7e-16
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 8/128 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP ++ + + N
Sbjct: 737 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 796
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +
Sbjct: 797 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVAVESV 856
Query: 415 EDDTEFDQ 438
E+D E ++
Sbjct: 857 EEDEEEEE 864
Score = 77.4 bits (182), Expect = 3e-14
Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP ++ + + N
Sbjct: 306 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 365
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQ 396
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 366 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 81.0 bits (191), Expect = 2e-15
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 8/130 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP ++ + + N
Sbjct: 906 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 965
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +
Sbjct: 966 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 1025
Query: 415 EDDTEFDQED 444
E++ E + E+
Sbjct: 1026 EEEGEEEGEE 1035
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 80.6 bits (190), Expect = 3e-15
Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP ++ + + N
Sbjct: 321 GDVVPKDVNSSIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 380
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +
Sbjct: 381 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 440
Query: 415 EDDTEFDQED 444
E + E + E+
Sbjct: 441 EGEGEEEGEE 450
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 79.8 bits (188), Expect = 5e-15
Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP ++ + + N
Sbjct: 321 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 380
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQY-QDAT 411
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ D+
Sbjct: 381 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 440
Query: 412 AEDDTEFDQED 444
E + E + E+
Sbjct: 441 EEGEEEEEGEE 451
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 79.4 bits (187), Expect = 7e-15
Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP ++ + + N
Sbjct: 258 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 317
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +
Sbjct: 318 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 377
Query: 415 EDDTEFDQEDMEE 453
E + E +E+ EE
Sbjct: 378 EGEGE--EEEGEE 388
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 79.4 bits (187), Expect = 7e-15
Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP ++ + + N
Sbjct: 754 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 813
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +
Sbjct: 814 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 873
Query: 415 EDDTEFDQEDMEE 453
E + E +E+ EE
Sbjct: 874 EGEGE--EEEGEE 884
Score = 77.0 bits (181), Expect = 4e-14
Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP ++ + + N
Sbjct: 321 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 380
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQ 396
TTA+ E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 381 TTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 79.4 bits (187), Expect = 7e-15
Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP ++ + + N
Sbjct: 246 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 305
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +
Sbjct: 306 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 365
Query: 415 EDDTEFDQEDMEE 453
E + E +E+ EE
Sbjct: 366 EGEGE--EEEGEE 376
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 79.4 bits (187), Expect = 7e-15
Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP ++ + + N
Sbjct: 119 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 178
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +
Sbjct: 179 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 238
Query: 415 EDDTEFDQEDMEE 453
E + E +E+ EE
Sbjct: 239 EGEGE--EEEGEE 249
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + +K+V+ + +I+ K + FV+W P K + PP ++ + + N
Sbjct: 305 GDVVLKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 364
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQ 396
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 365 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 418
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 77.8 bits (183), Expect = 2e-14
Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP ++ + + N
Sbjct: 692 GDVVPKDVNSAIATIKTKKTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 751
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQ 396
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 752 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 805
Score = 77.4 bits (182), Expect = 3e-14
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Frame = +1
Query: 97 EVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQE 252
+V+ + +I+ K + FV+W P K + PP ++ + + NTTAI E
Sbjct: 1107 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 1166
Query: 253 LFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEF 432
+ R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E + E
Sbjct: 1167 AWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEE 1226
Query: 433 DQED 444
+ E+
Sbjct: 1227 EGEE 1230
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 77.8 bits (183), Expect = 2e-14
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP ++ + + N
Sbjct: 286 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 345
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQY-QDAT 411
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ D+
Sbjct: 346 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 405
Query: 412 AEDDTEFDQED 444
+ + E E+
Sbjct: 406 GDGEDEDGGEE 416
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 69.3 bits (162), Expect(2) = 3e-14
Identities = 29/73 (39%), Positives = 49/73 (67%)
Frame = +1
Query: 226 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 405
+ NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 530 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV-G 588
Query: 406 ATAEDDTEFDQED 444
A + DD+ D+++
Sbjct: 589 ADSPDDSVVDEDE 601
Score = 28.3 bits (60), Expect(2) = 3e-14
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNT 237
G + K+V+ + +I+ K + FV+W P K +I K K + TF T
Sbjct: 452 GDVVPKDVNSAIAAIKMKRTIQFVDWCPTGFKCHP-NISDKQKKSTKTFYSGT 503
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 75.4 bits (177), Expect = 1e-13
Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGL--------KMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + P + + S + N
Sbjct: 119 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQQPTAVPGGDLAKVQRSVCMLSN 178
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQ 396
TTAI + + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 179 TTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 68.9 bits (161), Expect = 1e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Frame = +1
Query: 205 LKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVS 384
++ S + NTTAI + + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 69 VQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 128
Query: 385 EYQQYQDATAEDDTEFDQED 444
+Y++ + ++D E + E+
Sbjct: 129 DYEEVGVDSVDNDGETEAEE 148
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 67.3 bits (157), Expect = 3e-11
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELF 258
G + K+V+ + +I+ K + F +W P K + PP + I E +
Sbjct: 246 GDVVPKDVNAAIATIRPKRTFQFGDWCPTGFKVGINSQPPTVVPGGDL----AKPIAEAW 301
Query: 259 KRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQY-QDATAEDDTEFD 435
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ D+ + + E
Sbjct: 302 ARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVGDGEDEDG 361
Query: 436 QED 444
E+
Sbjct: 362 GEE 364
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 59.7 bits (138), Expect = 6e-09
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Frame = +1
Query: 97 EVDEQMLSIQN-KNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISE 273
EV + +I+ K S F+ W KT +C +PP G S + N + I+ F + +
Sbjct: 371 EVSDIRRNIERLKPSLKFIHWNQEGWKTGLCSVPPVGQPYSLLTLANNSCIKNTFVELKD 430
Query: 274 QFSAMFRRKAFLHWYTG-EGMDEMEFNEAESNVNDLVSEY 390
+F +++RKA +H YT +G++ +F++ +++ L+ EY
Sbjct: 431 RFMKLYKRKAHVHHYTHVDGLEVGQFDDGLESLSWLIQEY 470
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 50.4 bits (115), Expect = 4e-06
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = +1
Query: 289 FRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQED 444
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E + E D E+
Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEDDEE 64
>SB_37070| Best HMM Match : Vicilin_N (HMM E-Value=4.8)
Length = 319
Score = 33.1 bits (72), Expect = 0.59
Identities = 16/65 (24%), Positives = 35/65 (53%)
Frame = +1
Query: 331 MDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD*IGSIPPIYEI 510
+ ++ F++ ++ + YQ+ Q+ E++ E +E+MEE +QD+ + P E
Sbjct: 167 LSQLMFSKYDAEKTQWIYNYQREQEREMEEEEEDSEEEMEEDSQDKPGNPFKGTPTEEEK 226
Query: 511 LLLKN 525
+L+N
Sbjct: 227 EMLRN 231
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 33.1 bits (72), Expect = 0.59
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 22 AAALXTSGIPRAAGNWHEGGRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK 201
+ +L G P+ W++ G++ + + Q++SI N S + P++V T +C+ K
Sbjct: 1539 STSLEIQGKPKPKVTWYKDGKVLRETRNIQLMSIGNTYSVTIIRTTPDDVGTYMCEATNK 1598
Query: 202 GLKMSSTF 225
S F
Sbjct: 1599 AGTSSRKF 1606
>SB_48462| Best HMM Match : zf-C2H2 (HMM E-Value=1.1e-18)
Length = 536
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 325 EGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQED 444
E + + E E++ N ++ E Q +QD +EDD+E + E+
Sbjct: 15 EDLSDEESIESDGNCSNFSDELQNFQDDDSEDDSENEDEE 54
>SB_47086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +2
Query: 293 DARLSCTGTPARAWTRWNSTRRRAMSMIWFRNTSSTRTRPLKMTRNLT-----RKIWRSS 457
D L T AR TR N+TR+ S + RN+S T P+++T T + R+
Sbjct: 249 DCHLFNLSTTARPITRSNTTRQEHNSGVDCRNSSCT---PIEVTETSTLEKSANTLSRAG 305
Query: 458 LKTSTMIKSVLYLPSMKSCYLR 523
++ ++ + ++L M C+LR
Sbjct: 306 FLSAAILTAAVFLIVMCCCFLR 327
>SB_45838| Best HMM Match : Sigma70_r1_1 (HMM E-Value=2.6)
Length = 166
Score = 31.5 bits (68), Expect = 1.8
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +1
Query: 223 FIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVND---LVSEYQ 393
F+G + ++ I + + RR L E + ++ +ND LV+E
Sbjct: 73 FVGFGKLYEAQYRMIKNRITHAIRRVGPLTLEKLEETFKADWELIRLLLNDMIKLVNEDS 132
Query: 394 QYQDAT-AEDDTEFDQEDMEELAQDEHH 474
+ Q A AE +TE ++E+ +++A DEHH
Sbjct: 133 EKQAARDAESETENEEENYQDIAFDEHH 160
>SB_6617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 31.5 bits (68), Expect = 1.8
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 164 IT*RPPCVTSRLKASRCPRHSSVTPQPSRSCLREYQSSSPLCSDARLSCTGTPAR 328
+T PPC+TS A P +S+T R CL S+ P ++ T P R
Sbjct: 171 LTDPPPCLTSITSADPRPCLTSITSTDPRPCLTSITSTDPQPCLTGINTTEPPPR 225
>SB_46547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1058
Score = 29.9 bits (64), Expect = 5.5
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -1
Query: 600 TKRIYKRRHPAMRGMKHNYEILIYHILK*QDFIDGRYRTDLIM 472
TK R +RG+K N E I ++L+ +DF+DG TD I+
Sbjct: 383 TKLHRSLREFRVRGVKTNTEF-IRNVLQHKDFLDGHVTTDFIL 424
>SB_16010| Best HMM Match : Ribosomal_L6e_N (HMM E-Value=1.9)
Length = 251
Score = 29.9 bits (64), Expect = 5.5
Identities = 13/68 (19%), Positives = 37/68 (54%)
Frame = +1
Query: 76 GGRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQEL 255
GG+M +K++++ + + +NK V N + + C++ +G+K ++ ++L
Sbjct: 92 GGQMRVKDIEKVLEAYKNKGQLKHVILEDNPLVSPPCEVVSEGVKAVFEYLRKRQERRDL 151
Query: 256 FKRISEQF 279
F+ ++++
Sbjct: 152 FEGYNKEY 159
>SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 29.5 bits (63), Expect = 7.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 325 EGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 468
E +EM E + + + + ++ E D E D+ED EE+ Q+E
Sbjct: 127 EDKEEMGKGEMDKEDKEEMDQEMDKEEMDQEMDKEMDKEDKEEMDQEE 174
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,278,836
Number of Sequences: 59808
Number of extensions: 570830
Number of successful extensions: 1689
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1659
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4812488570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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