Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_D07_e436_07.seq
(1488 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 238 8e-63
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 233 2e-61
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 231 1e-60
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 230 2e-60
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 228 7e-60
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 228 7e-60
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 132 5e-31
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 132 5e-31
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 84 2e-16
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 83 6e-16
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 82 9e-16
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 82 9e-16
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 81 2e-15
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 81 2e-15
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 81 2e-15
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 81 2e-15
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 79 6e-15
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 79 6e-15
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 79 1e-14
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 78 1e-14
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 78 1e-14
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 78 2e-14
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 78 2e-14
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 75 1e-13
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 64 2e-10
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 38 0.024
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 38 0.024
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 38 0.024
U80840-1|AAK68304.1| 498|Caenorhabditis elegans Hypothetical pr... 33 0.69
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 31 2.8
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 30 4.8
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 30 4.8
AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical ... 29 6.4
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 29 8.5
L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical pr... 29 8.5
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 29 8.5
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 29 8.5
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 238 bits (582), Expect = 8e-63
Identities = 105/124 (84%), Positives = 120/124 (96%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELF 258
GRMSMKEVDEQML++QNKNSSYFVEWIPNNVKTAVCDIPP+G+KM++TF+GN+TAIQELF
Sbjct: 319 GRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQELF 378
Query: 259 KRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQ 438
KRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQ+ATA+D+ EFD+
Sbjct: 379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEGEFDE 438
Query: 439 EDME 450
D +
Sbjct: 439 HDQD 442
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 233 bits (571), Expect = 2e-61
Identities = 105/122 (86%), Positives = 117/122 (95%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELF 258
GRMSM+EVD+QM+++QNKNSSYFVEWIPNNVKTAVCDIPP+GLKMS+TFIGN+TAIQELF
Sbjct: 319 GRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELF 378
Query: 259 KRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQ 438
KRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQ+ATAE+D E D
Sbjct: 379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAEEDGELDG 438
Query: 439 ED 444
D
Sbjct: 439 TD 440
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 231 bits (565), Expect = 1e-60
Identities = 102/117 (87%), Positives = 115/117 (98%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELF 258
GRMSM+EVDEQML++QNKNSSYFVEWIPNNVKTAVCDIPP+GLKM++TF+GN+TAIQELF
Sbjct: 319 GRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELF 378
Query: 259 KRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTE 429
KRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDL+SEYQQYQ+ATAEDD +
Sbjct: 379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAEDDVD 435
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 230 bits (562), Expect = 2e-60
Identities = 102/115 (88%), Positives = 114/115 (99%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELF 258
GRMSM+EVDEQMLS+QNKNSSYFVEWIPNNVKTAVCDIPP+GLKM++TF+GN+TAIQELF
Sbjct: 319 GRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELF 378
Query: 259 KRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDD 423
KRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDL+SEYQQYQ+ATAED+
Sbjct: 379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAEDE 433
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 228 bits (558), Expect = 7e-60
Identities = 106/123 (86%), Positives = 116/123 (94%), Gaps = 2/123 (1%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELF 258
GRMSMKEVDEQML+IQNKNSSYFV+WIPNNVKTAVCDIPP+GLKMS+TFIGN+TAIQELF
Sbjct: 319 GRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELF 378
Query: 259 KRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDT--EF 432
KRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQ+A A++D F
Sbjct: 379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAADEDAAEAF 438
Query: 433 DQE 441
D E
Sbjct: 439 DGE 441
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 228 bits (558), Expect = 7e-60
Identities = 106/123 (86%), Positives = 116/123 (94%), Gaps = 2/123 (1%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELF 258
GRMSMKEVDEQML+IQNKNSSYFV+WIPNNVKTAVCDIPP+GLKMS+TFIGN+TAIQELF
Sbjct: 319 GRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELF 378
Query: 259 KRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDT--EF 432
KRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQ+A A++D F
Sbjct: 379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAADEDAAEAF 438
Query: 433 DQE 441
D E
Sbjct: 439 DGE 441
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 132 bits (320), Expect = 5e-31
Identities = 60/108 (55%), Positives = 84/108 (77%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELF 258
G+ + K+ EQ++S++N++ S +E +P + T VCDIP +GLK S+TFI N+TAIQE
Sbjct: 317 GQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPL 376
Query: 259 KRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQ 402
KRIS+QF+ +FRRKAFLHWYT M+E EF +AE+ VNDL+SE+QQY+
Sbjct: 377 KRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYE 421
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 132 bits (320), Expect = 5e-31
Identities = 60/108 (55%), Positives = 84/108 (77%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELF 258
G+ + K+ EQ++S++N++ S +E +P + T VCDIP +GLK S+TFI N+TAIQE
Sbjct: 317 GQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPL 376
Query: 259 KRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQ 402
KRIS+QF+ +FRRKAFLHWYT M+E EF +AE+ VNDL+SE+QQY+
Sbjct: 377 KRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYE 421
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 84.2 bits (199), Expect = 2e-16
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 8/127 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPP--------KGLKMSSTFIGN 234
G + K+V+ + S++ K S FV+W P K + PP L+ + + N
Sbjct: 326 GDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLSN 385
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDAG 445
Query: 415 EDDTEFD 435
E D E D
Sbjct: 446 EPDEEDD 452
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 82.6 bits (195), Expect = 6e-16
Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + KE++ + +I+ K + FV+W P K + PP L+ + + N
Sbjct: 321 GDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSN 380
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQY-QDAT 411
TTAIQE + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ D+
Sbjct: 381 TTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSF 440
Query: 412 AEDDTEF 432
+D E+
Sbjct: 441 DPNDEEY 447
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 82.2 bits (194), Expect = 9e-16
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK-------GLKMSST-FIGN 234
G + K+++ + +++ K + FVEW P K + PP G + S I N
Sbjct: 327 GDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISN 386
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +
Sbjct: 387 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDEL 446
Query: 415 EDDTE 429
DD +
Sbjct: 447 PDDID 451
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 82.2 bits (194), Expect = 9e-16
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK-------GLKMSST-FIGN 234
G + K+++ + +++ K + FVEW P K + PP G + S I N
Sbjct: 299 GDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISN 358
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +
Sbjct: 359 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDEL 418
Query: 415 EDDTE 429
DD +
Sbjct: 419 PDDID 423
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 81.0 bits (191), Expect = 2e-15
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K S FV+W P K + PP + + + N
Sbjct: 321 GDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSN 380
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +
Sbjct: 381 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSM 440
Query: 415 EDDTEFDQE 441
ED+ E E
Sbjct: 441 EDNGEEGDE 449
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 81.0 bits (191), Expect = 2e-15
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K S FV+W P K + PP + + + N
Sbjct: 320 GDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSN 379
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +
Sbjct: 380 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSM 439
Query: 415 EDDTEFDQE 441
ED+ E E
Sbjct: 440 EDNGEEGDE 448
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 81.0 bits (191), Expect = 2e-15
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K S FV+W P K + PP + + + N
Sbjct: 321 GDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSN 380
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +
Sbjct: 381 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSM 440
Query: 415 EDDTEFDQE 441
ED+ E E
Sbjct: 441 EDNGEEGDE 449
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 81.0 bits (191), Expect = 2e-15
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K S FV+W P K + PP + + + N
Sbjct: 321 GDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSN 380
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +
Sbjct: 381 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSM 440
Query: 415 EDDTEFDQE 441
ED+ E E
Sbjct: 441 EDNGEEGDE 449
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 79.4 bits (187), Expect = 6e-15
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K S FV+W P K + PP + + + N
Sbjct: 319 GDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSN 378
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 379 TTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE----VG 434
Query: 415 EDDTEFDQEDMEE 453
D E +ED EE
Sbjct: 435 ADSNEGLEEDGEE 447
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 79.4 bits (187), Expect = 6e-15
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K S FV+W P K + PP + + + N
Sbjct: 319 GDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSN 378
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 379 TTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE----VG 434
Query: 415 EDDTEFDQEDMEE 453
D E +ED EE
Sbjct: 435 ADSNEGLEEDGEE 447
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 78.6 bits (185), Expect = 1e-14
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 9/124 (7%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK---GLKMSST-----FIGN 234
G + K+V + SI+ + S FV+W P K + PP G M+ + N
Sbjct: 316 GDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSN 375
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQY-QDAT 411
TTAI E ++R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ D+
Sbjct: 376 TTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADSD 435
Query: 412 AEDD 423
A D+
Sbjct: 436 ANDN 439
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 78.2 bits (184), Expect = 1e-14
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP + + + N
Sbjct: 319 GDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSN 378
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF EA DL + + Y++ A
Sbjct: 379 TTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEEVGA 435
Query: 415 EDDTEFDQEDMEE 453
+ + ++E+ EE
Sbjct: 436 DSNEGGNEEEGEE 448
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 78.2 bits (184), Expect = 1e-14
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP + + + N
Sbjct: 319 GDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSN 378
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF EA DL + + Y++ A
Sbjct: 379 TTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEEVGA 435
Query: 415 EDDTEFDQEDMEE 453
+ + ++E+ EE
Sbjct: 436 DSNEGGNEEEGEE 448
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 77.8 bits (183), Expect = 2e-14
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP + + + N
Sbjct: 319 GDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSN 378
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 379 TTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE----VG 434
Query: 415 EDDTEFDQEDMEE 453
D E +E+ EE
Sbjct: 435 ADSNEGGEEEGEE 447
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 77.8 bits (183), Expect = 2e-14
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGN 234
G + K+V+ + +I+ K + FV+W P K + PP + + + N
Sbjct: 319 GDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSN 378
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 379 TTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE----VG 434
Query: 415 EDDTEFDQEDMEE 453
D E +E+ EE
Sbjct: 435 ADSNEGGEEEGEE 447
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 75.4 bits (177), Expect = 1e-13
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAV---CDIPPKGLKMSST-----FIGN 234
G + K+V+ + S++ K FV+W P K + I +G ++ + N
Sbjct: 324 GDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSN 383
Query: 235 TTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATA 414
TTAI E + R+ +F M+ ++AF+HW+ GEGM+E EF EA ++ L +Y + TA
Sbjct: 384 TTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDTA 443
Query: 415 EDDTEFDQ 438
+ + E D+
Sbjct: 444 DLEEENDE 451
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 64.1 bits (149), Expect = 2e-10
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = +1
Query: 226 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 405
+ +TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE--- 69
Query: 406 ATAEDDTEFDQEDMEE 453
D E +ED EE
Sbjct: 70 -VGADSNEGLEEDGEE 84
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 37.5 bits (83), Expect = 0.024
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Frame = +1
Query: 184 CDIPPKGLKMSSTFIGNTT------AIQELFKRISEQFSAMFRRKAFLHWYT--GEGMDE 339
C I P+ + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 340 MEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 477
E+N+ E +++D+ ++ D T D E ED+ +LA + H D
Sbjct: 743 EEWND-EEDLSDVGEDFD--LDPTNHSDDEDPMEDV-DLAPEVHDD 784
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 37.5 bits (83), Expect = 0.024
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Frame = +1
Query: 184 CDIPPKGLKMSSTFIGNTT------AIQELFKRISEQFSAMFRRKAFLHWYT--GEGMDE 339
C I P+ + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 340 MEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 477
E+N+ E +++D+ ++ D T D E ED+ +LA + H D
Sbjct: 743 EEWND-EEDLSDVGEDFD--LDPTNHSDDEDPMEDV-DLAPEVHDD 784
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 37.5 bits (83), Expect = 0.024
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Frame = +1
Query: 184 CDIPPKGLKMSSTFIGNTT------AIQELFKRISEQFSAMFRRKAFLHWYT--GEGMDE 339
C I P+ + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 340 MEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 477
E+N+ E +++D+ ++ D T D E ED+ +LA + H D
Sbjct: 743 EEWND-EEDLSDVGEDFD--LDPTNHSDDEDPMEDV-DLAPEVHDD 784
>U80840-1|AAK68304.1| 498|Caenorhabditis elegans Hypothetical
protein F08D12.6 protein.
Length = 498
Score = 32.7 bits (71), Expect = 0.69
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 79 GRMSMKEVDEQMLSIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAI-QEL 255
G ++K V E M + + + W V+ +C I KG+ + I N++++ E+
Sbjct: 140 GIQNLKRVCEAMKGLTARKI-FLKNWTDEIVQNVICSIQHKGISFNKKLISNSSSLNHEI 198
Query: 256 FKRISEQFSAMFRRKAF 306
R FSA F F
Sbjct: 199 LVRNFFSFSASFPEHNF 215
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 30.7 bits (66), Expect = 2.8
Identities = 41/127 (32%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Frame = +2
Query: 98 KSMSRCSQFKTRTHRTSWNGSRIT*RPPCVTSRLKASRCPRHSSVTPQPSRSCLREYQSS 277
+S+S+ S + R+ S +GSR P SR S R S + SRS R
Sbjct: 305 RSLSK-SPARRRSRHLSRSGSRT---PAQRHSRRSESTSRRRSG---RHSRSRSRSPPRK 357
Query: 278 SPLCSDARLSCTGTPARAWTRWNS-TRRRAMS---MIWFRNTSSTRTRPLKMTRNLTRKI 445
P+ S + TP R WTR S TR +A S + W S +R+R RNL K
Sbjct: 358 RPVRRSRSRSRSRTPNRNWTRARSRTRSQAKSSSTLTW--PLSPSRSRSNSNERNLKEKK 415
Query: 446 WRSSLKT 466
R K+
Sbjct: 416 DRKKKKS 422
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/48 (22%), Positives = 29/48 (60%)
Frame = +1
Query: 334 DEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 477
+E++ ++++ +D + ++ +D ED+ E D+E+ E +++E D
Sbjct: 565 NELKLDDSDEEEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEED 612
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/48 (22%), Positives = 29/48 (60%)
Frame = +1
Query: 334 DEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 477
+E++ ++++ +D + ++ +D ED+ E D+E+ E +++E D
Sbjct: 575 NELKLDDSDEEEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEED 622
>AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical
protein Y26D4A.8 protein.
Length = 380
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +1
Query: 325 EGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQD 465
E EME N +SN+N + SE QYQ + ++ F ++ +++L ++
Sbjct: 69 EDKKEMEGN-IQSNINAMKSENLQYQTQSHQEKKVFAEKKLQKLKEN 114
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 29.1 bits (62), Expect = 8.5
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 208 KMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEME---FNEAESNVNDL 378
K+S + N+T++ LF+ + ++ + ++AF+ + E +D ++A V DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 379 VSEYQ 393
+ EY+
Sbjct: 428 LDEYK 432
>L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical
protein F44B9.2 protein.
Length = 503
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 337 EMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQD 465
E +FN A ND++ ++ + AE +T+F +++ ELA D
Sbjct: 164 ERKFNTAIREANDILEDFDKKSKQVAE-NTKFVAKELAELAAD 205
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 29.1 bits (62), Expect = 8.5
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 208 KMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEME---FNEAESNVNDL 378
K+S + N+T++ LF+ + ++ + ++AF+ + E +D ++A V DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 379 VSEYQ 393
+ EY+
Sbjct: 428 LDEYK 432
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 29.1 bits (62), Expect = 8.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 385 EYQQYQDATAEDDTEFDQEDMEELAQDE 468
E+++Y+D E++ EFD E++EEL +
Sbjct: 28 EFEEYEDELLEEEEEFD-EELEELENSD 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,450,555
Number of Sequences: 27780
Number of extensions: 435239
Number of successful extensions: 1559
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4277144658
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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