Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_D04_e412_08.seq
         (1545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           26   2.5  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    26   2.5  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    26   2.5  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 887 RGLQRQGAKNRLQGDGXYVNHHPKSSFWXR 976
           RG + + A+N   G   YVNH+ K++ W R
Sbjct: 165 RGWEERSAQN---GRTYYVNHYTKTTQWSR 191


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 37  TSGIPRAAGNSARGRRQA 90
           TSG PRAAG+S+  RR +
Sbjct: 65  TSGEPRAAGSSSNSRRNS 82


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 37  TSGIPRAAGNSARGRRQA 90
           TSG PRAAG+S+  RR +
Sbjct: 65  TSGEPRAAGSSSNSRRNS 82


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,123,962
Number of Sequences: 2352
Number of extensions: 21595
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 181658565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)