Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_D01_e388_07.seq
         (1578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      30   0.041
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.50 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   1.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   6.2  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 30.3 bits (65), Expect = 0.041
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = +3

Query: 444 ISEDLYDGQVLQKLLEVLTETKLDVPEVTQSEE---GQRQKLSVVLRAVNRVLYGTSKPV 614
           + +D  DG+  ++  E LTE K  + ++T+SEE   G       V RA +  ++G  +PV
Sbjct: 20  VFKDEGDGEDEKRSSENLTEEKSSLIDLTESEEKSGGSYSSNKNVSRADHSPVFGKVEPV 79

Query: 615 PKWS 626
           P  S
Sbjct: 80  PHTS 83


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 567  VLRAVNRVLYGTSKPVPK 620
            +LR +NRVL G +KP PK
Sbjct: 2181 LLRTINRVLRGYAKPDPK 2198


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -3

Query: 415 NSSLIQSINTCISSFTLGSSRDLGSIIALSSFSFKLYSS 299
           NS  I+ I + + SF L ++ D    + +S+ +FK YS+
Sbjct: 73  NSIQIRCIESNMISFYLEATDDFAYFLEVSNNNFKTYSN 111


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 231 LVLPXCASCDL 199
           LV+P C SCDL
Sbjct: 208 LVMPLCKSCDL 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,994
Number of Sequences: 336
Number of extensions: 3916
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 47627625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)