Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_D01_e388_07.seq
         (1578 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF588653-1|ABQ96839.1|  176|Anopheles gambiae transposase protein.     25   4.5  
EF588460-1|ABQ96696.1|  177|Anopheles gambiae transposase protein.     25   4.5  

>EF588653-1|ABQ96839.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 15/63 (23%), Positives = 25/63 (39%)
 Frame = +3

Query: 258 IDSPGSPTAPEIPPEEYSLNENEERAIIEPRSLEDPRVKELIQVLIDWINDELAPHRIIV 437
           ID    P+A    P     N N        + + +   K L ++L+D I  E  P  ++ 
Sbjct: 67  IDDEAGPSAVNFQPSNQYFNSNMSIQGYLKKPINNETKKVLDRMLLDLICKECLPFNLVE 126

Query: 438 KDI 446
            +I
Sbjct: 127 SEI 129


>EF588460-1|ABQ96696.1|  177|Anopheles gambiae transposase protein.
          Length = 177

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 15/63 (23%), Positives = 25/63 (39%)
 Frame = +3

Query: 258 IDSPGSPTAPEIPPEEYSLNENEERAIIEPRSLEDPRVKELIQVLIDWINDELAPHRIIV 437
           ID    P+A    P     N N        + + +   K L ++L+D I  E  P  ++ 
Sbjct: 68  IDDEAGPSAVNFQPSNQYFNSNMSIQGYLKKPINNETKKVLDRMLLDLICKECLPFNLVE 127

Query: 438 KDI 446
            +I
Sbjct: 128 SEI 130


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,043,844
Number of Sequences: 2352
Number of extensions: 18568
Number of successful extensions: 48
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 68
effective length of database: 404,043
effective search space used: 184647651
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)