Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_D01_e388_07.seq
         (1578 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    26   0.77 
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    25   1.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   4.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   4.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   4.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   9.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   9.5  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 593 QNPVHCSQHDRQLLTLPFFRLRHLR 519
           + P HCS  DRQ + +   R RHLR
Sbjct: 35  EKPYHCSHCDRQFVQVANLR-RHLR 58


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 234 VQAEGKFAIDSPGSPTAPEIPPE 302
           V  E  F +     PTAP IPPE
Sbjct: 90  VADENGFQVQGSHIPTAPPIPPE 112


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 588 VLYGTSKPVPKWSVDSVHCKHVVSILHLLVALARHFP 698
           V+ GT K   K  + S H  ++ S+LH L     H P
Sbjct: 240 VVSGTQKKKRKIYLFSGHESNIASVLHALQLYYPHVP 276


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 588 VLYGTSKPVPKWSVDSVHCKHVVSILHLLVALARHFP 698
           V+ GT K   K  + S H  ++ S+LH L     H P
Sbjct: 255 VVSGTQKKKRKIYLFSGHESNIASVLHALQLYYPHVP 291


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -1

Query: 597 RTEPGSLLSTRQTASDVALLQTASPPARPAWSRSEPPGASGV 472
           R   GS  S        +L +T  PP  P + + + P  SG+
Sbjct: 541 RANSGSTSSGDDELHRASLSKTPQPPQCPRFRKLDSPSDSGI 582


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 619 SGAWTXCTASTSCRYCTCWS 678
           SGAW  CTA+ S      WS
Sbjct: 46  SGAWLDCTATGSPPLNIDWS 65


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 619 SGAWTXCTASTSCRYCTCWS 678
           SGAW  CTA+ S      WS
Sbjct: 46  SGAWLDCTATGSPPLNIDWS 65


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,987
Number of Sequences: 438
Number of extensions: 4955
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 55506000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)