Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_C11_e467_05.seq
         (1505 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   5.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   5.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   7.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   7.8  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 609  DTFSILLNALNIIF*MVLHITIYIV 535
            DTF I+L  LN++  +V  + + IV
Sbjct: 1599 DTFQIILANLNLVVPVVAAVLVIIV 1623


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 477 ILFNRFHI*HIFYKQVQRYQSPFCGFMRL 391
           + F RF   ++ Y  +   Q PFC F+R+
Sbjct: 168 VFFKRFLPVYVSYLLIFVQQIPFCFFVRV 196


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +1

Query: 742 FKYKCAIGPXVXNXHIQTSYINHSSPSLHIWKIYXLDLNALLV 870
           F YKC I   + N  I  +        L IW+ + +  N L +
Sbjct: 150 FSYKCGIQYHICNTVISATVCFMMLLMLEIWRRFTILNNYLTI 192


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +1

Query: 742 FKYKCAIGPXVXNXHIQTSYINHSSPSLHIWKIYXLDLNALLV 870
           F YKC I   + N  I  +        L IW+ + +  N L +
Sbjct: 146 FSYKCGIQYHICNTVISATVCFMMLLMLEIWRRFTILNNYLTI 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 254,673
Number of Sequences: 336
Number of extensions: 4546
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45169425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)