Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_C10_e459_06.seq
         (1577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   3.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   3.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   3.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   8.2  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 84  CGLHFDDHCSRSDVNSLFLFF 146
           CG+++ D CS ++    +LFF
Sbjct: 181 CGMYYRDECSFAESIPPYLFF 201


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 84  CGLHFDDHCSRSDVNSLFLFF 146
           CG+++ D CS ++    +LFF
Sbjct: 414 CGMYYRDECSFAESIPPYLFF 434


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 84  CGLHFDDHCSRSDVNSLFLFF 146
           CG+++ D CS ++    +LFF
Sbjct: 414 CGMYYRDECSFAESIPPYLFF 434


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 160 YLCPILNAVTILKS 201
           YLCP+L  V+IL++
Sbjct: 727 YLCPVLLRVSILRN 740


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,585
Number of Sequences: 336
Number of extensions: 3244
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 47627625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)