Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_C10_e459_06.seq
         (1577 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    24   4.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   4.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   9.5  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 473 SRPARYVGXHY*FTTLINKMLSNLVQTVSNLRVMII 580
           +RPA Y+      TTL + + S L Q  SN++V+ I
Sbjct: 157 NRPA-YLASKCALTTLTDCLRSELAQCESNIKVISI 191


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 378 ILLKHNSFATQRAGGRDATAMFQSSIV 458
           + LKHN     RA GR+ + +  S I+
Sbjct: 677 VFLKHNDTPVVRASGRELSYVLLSGIL 703


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 474 EPSALILLKIETLRWRPV 421
           EP +  LL +E  RWRP+
Sbjct: 114 EPLSPHLLNLEVERWRPL 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 254,044
Number of Sequences: 438
Number of extensions: 4307
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 55506000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)