Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_C09_e451_05.seq
(1577 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 239 1e-61
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 234 5e-60
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 188 5e-46
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 188 5e-46
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 186 2e-45
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 183 1e-44
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 178 4e-43
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 177 9e-43
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 172 2e-41
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 171 4e-41
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 160 8e-38
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 151 4e-35
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 148 3e-34
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 148 5e-34
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 139 2e-31
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 138 4e-31
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 114 7e-24
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 96 2e-18
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 90 2e-16
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 83 3e-14
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 79 4e-13
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 76 3e-12
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 74 1e-11
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 72 4e-11
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 68 8e-10
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 66 2e-09
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 63 2e-08
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 61 9e-08
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 58 8e-07
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 54 8e-06
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 52 6e-05
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 47 0.001
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 44 0.008
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 38 0.55
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.55
UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1; ... 36 2.2
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 3.9
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 5.1
UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11; Eur... 34 8.9
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 239 bits (586), Expect = 1e-61
Identities = 126/234 (53%), Positives = 150/234 (64%)
Frame = +3
Query: 84 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 263
ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN VH ++ KN RQPY VS+ AGHQT
Sbjct: 4 ARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQT 62
Query: 264 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 443
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 63 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRY 122
Query: 444 XXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXIKAWF*XP* 623
++GH +E++PELPLVV DKV+ KTK+AV+ L+ +KAW
Sbjct: 123 AICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIK- 181
Query: 624 SVQITAPACR*REKCXXVVVXNAKDPLIIX**GQGS*LVHFXNIPGIQMLNXNK 785
V + + K + P II G + F NIPGI +LN +K
Sbjct: 182 KVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGI-IKAFRNIPGITLLNVSK 234
Score = 41.5 bits (93), Expect = 0.059
Identities = 33/104 (31%), Positives = 41/104 (39%), Gaps = 1/104 (0%)
Frame = +1
Query: 613 DXLKVYKSQRLRAGKGKNAXSXSCXTQRTPLSXYNKDKGPDSCISETFLASRCXTXTX*N 792
D KVY SQR+RAGKGK + +R P YN+D G + N
Sbjct: 179 DIKKVYASQRMRAGKGK-MRNRRRIQRRGPCIIYNEDNGIIKAF-RNIPGITLLNVSKLN 236
Query: 793 XLXLXPGXXSXXXYYLXQXPFXRLDPLXRSW-KXXQXKKXLXLP 921
L L PG + F +LD L +W K K LP
Sbjct: 237 ILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLP 280
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 234 bits (572), Expect = 5e-60
Identities = 135/332 (40%), Positives = 182/332 (54%), Gaps = 4/332 (1%)
Frame = +3
Query: 84 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 263
ARPLVSVY+EK+E ++ LP VFKAPIRPD+VN+VH + +N RQ Y VS+ AGHQT
Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQT 65
Query: 264 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 443
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 66 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRY 125
Query: 444 XXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXIKAWF*XP* 623
Q++GH+++ + E PLVVSD+VQ++ KTKQAVIFLR +K W
Sbjct: 126 ALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWA---- 181
Query: 624 SVQITAPACR*REKCXXVVVXN---AKDPLIIX**GQGS*LVHFXNIPGIQMLNXNKXKX 794
+Q + R R + + PL++ +G F NIPGI+ +N +K
Sbjct: 182 DIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGL-RKAFRNIPGIETINVDKLNL 240
Query: 795 PEXGTRXXILXXLLFGTXPFSXA*PVVXLLEXXSXKKKXXXAQXEXWPXPNXXXXLXSNK 974
+ + +++ F+ + + S KK + L S +
Sbjct: 241 LKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEE 300
Query: 975 -TXXXXXPQXXCFXXXXEINPLSXXKXILTLS 1067
P+ F +NPL+ + ++ L+
Sbjct: 301 IRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLN 332
Score = 43.6 bits (98), Expect = 0.015
Identities = 34/104 (32%), Positives = 41/104 (39%), Gaps = 1/104 (0%)
Frame = +1
Query: 613 DXLKVYKSQRLRAGKGKNAXSXSCXTQRTPLSXYNKDKGPDSCISETFLASRCXTXTX*N 792
D KVYKSQR RAG+G +R PL Y+KD+G N
Sbjct: 182 DIQKVYKSQRFRAGRG-TMRDRRRIARRGPLVVYDKDEGLRKAF-RNIPGIETINVDKLN 239
Query: 793 XLXLXPGXXSXXXYYLXQXPFXRLDPLXRSWKXXQ-XKKXLXLP 921
L L PG + F RL+ L +WK KK LP
Sbjct: 240 LLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLP 283
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 188 bits (457), Expect = 5e-46
Identities = 93/174 (53%), Positives = 112/174 (64%)
Frame = +3
Query: 84 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 263
ARP VSVYS S+ V G + PLP VF APIR D+V VH +M+KN+RQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVG-TCPLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 264 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 443
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 444 XXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXIKA 605
+RGH + +PE+PLVV D +Q KTK+A+ FL+ I A
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAA 175
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 188 bits (457), Expect = 5e-46
Identities = 93/177 (52%), Positives = 113/177 (63%), Gaps = 3/177 (1%)
Frame = +3
Query: 84 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 263
+RP VSV S G ++PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 264 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 443
SAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 62 SAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRF 121
Query: 444 XXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQE---INKTKQAVIFLRXIKA 605
ARGH + ++ E+PLV++ +V E I +T A L+ + A
Sbjct: 122 ATVSALAASGVPALLFARGHQISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGA 178
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 186 bits (452), Expect = 2e-45
Identities = 91/170 (53%), Positives = 109/170 (64%)
Frame = +3
Query: 84 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 263
ARP+VSV+ A +S+PLP VF +P+R DLV V +MSKN RQ Y VS +AGHQ
Sbjct: 4 ARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQH 63
Query: 264 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 443
SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 64 SAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKRH 123
Query: 444 XXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLR 593
ARGH + +PELPLV+S+++Q INKT AV F +
Sbjct: 124 AVAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFK 173
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 183 bits (446), Expect = 1e-44
Identities = 100/233 (42%), Positives = 129/233 (55%), Gaps = 1/233 (0%)
Frame = +3
Query: 90 PLVSVYS-EKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTS 266
PLVSV+S + S V +PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 267 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 446
AESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 65 AESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHA 124
Query: 447 XXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXIKAWF*XP*S 626
ARGH + ++P++PLVV DK++ KT A+ FL+ A F
Sbjct: 125 AATAVAATGIVPLVLARGHRISQVPQIPLVVEDKIESYEKTTDALNFLKRFGA-FEDVQK 183
Query: 627 VQITAPACR*REKCXXVVVXNAKDPLIIX**GQGS*LVHFXNIPGIQMLNXNK 785
V T K K PL++ L F N+PG++++N +
Sbjct: 184 VVSTKVVRAGISKQRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVVNVTR 236
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 178 bits (433), Expect = 4e-43
Identities = 86/171 (50%), Positives = 109/171 (63%)
Frame = +3
Query: 87 RPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTS 266
RP VSV++ GA+L +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 267 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 446
A SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 63 ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQA 122
Query: 447 XXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXI 599
+RGH +E + E+P+VV D +++INKTK AV L I
Sbjct: 123 LASALAATAVVPVVMSRGHRIEALREVPMVVDDAIEQINKTKDAVKLLETI 173
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 177 bits (430), Expect = 9e-43
Identities = 83/170 (48%), Positives = 109/170 (64%)
Frame = +3
Query: 81 VARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQ 260
V RP+VSV+S +E G+++ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 261 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 440
TSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 61 TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKR 120
Query: 441 XXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFL 590
+RGH VE +PELPLV+ D ++ + KT+ AV L
Sbjct: 121 LALAVSVAATASVPLVMSRGHRVESVPELPLVLDDTMETLTKTRDAVELL 170
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 172 bits (418), Expect = 2e-41
Identities = 79/104 (75%), Positives = 88/104 (84%)
Frame = +3
Query: 102 VYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG 281
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPT-DTQIRLPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 282 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 413
TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 171 bits (416), Expect = 4e-41
Identities = 84/168 (50%), Positives = 103/168 (61%)
Frame = +3
Query: 87 RPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTS 266
RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG++TS
Sbjct: 5 RPLANVYGINGKKVVG-EVEIPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAGYETS 63
Query: 267 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 446
AESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 64 AESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKEKRYA 123
Query: 447 XXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFL 590
ARGH + + E+PLV S+ ++ + KTK A+ FL
Sbjct: 124 VCSSIAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTKDALKFL 171
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 160 bits (389), Expect = 8e-38
Identities = 79/171 (46%), Positives = 105/171 (61%)
Frame = +3
Query: 93 LVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAE 272
L +VY+ + ++P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 273 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 452
SWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMC 125
Query: 453 XXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXIKA 605
ARGH ++ +PELPLVVSD V++I KTK+AV L +KA
Sbjct: 126 SAIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKA 176
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 151 bits (367), Expect = 4e-35
Identities = 80/176 (45%), Positives = 104/176 (59%), Gaps = 1/176 (0%)
Frame = +3
Query: 84 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 263
+RP V++Y + + LP VF APIR D+V+ V+ + SKN RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 264 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 443
SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRF 122
Query: 444 XXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDK-VQEINKTKQAVIFLRXIKAW 608
ARGH + +P++PLVV+ K + I KTKQAV L+ I A+
Sbjct: 123 AVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAY 178
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 148 bits (359), Expect = 3e-34
Identities = 76/163 (46%), Positives = 90/163 (55%)
Frame = +3
Query: 111 EKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGR 290
E V +L LP VF PIR DLV + RQPY VSK AG Q SAESWGTGR
Sbjct: 9 EADGVTVKKTLDLPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGR 68
Query: 291 AVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXX 470
A+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 69 AIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAAS 128
Query: 471 XXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXI 599
+ARGH + + LP++VSD + + KTK AV LR +
Sbjct: 129 AQASLVEARGHRISDVKMLPIIVSDDIAKARKTKDAVEILRNL 171
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 148 bits (358), Expect = 5e-34
Identities = 74/164 (45%), Positives = 95/164 (57%)
Frame = +3
Query: 99 SVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESW 278
+VYS ++ L +P VF + IR D+V VH +M KN RQ Y VS AG TSA SW
Sbjct: 5 NVYSCNKNIID--KLKIPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSW 62
Query: 279 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 458
GTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 63 GTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSA 122
Query: 459 XXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFL 590
+RG+ V+ IPE+P V+ D +++I KT+ + L
Sbjct: 123 IASSSIVSIIVSRGYRVKTIPEIPFVIEDSIEKIPKTRDLIKIL 166
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 139 bits (337), Expect = 2e-31
Identities = 79/232 (34%), Positives = 125/232 (53%)
Frame = +3
Query: 81 VARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQ 260
++R V+V +++ + +++ LP VF PIR ++V +V+V+++KNA+QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 261 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 440
SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 59 VSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRK 118
Query: 441 XXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXIKAWF*XP 620
QARGH++ ++ E+P+VV D VQEI +T+ AV L+ + +
Sbjct: 119 FAIASAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQ 178
Query: 621 *SVQITAPACR*REKCXXVVVXNAKDPLIIX**GQGS*LVHFXNIPGIQMLN 776
+ + + K K PL+I +G + F NIPG++ ++
Sbjct: 179 RVLDGSVHRSS-KGKFRRAAYKTKKGPLVIYNEDKGI-VKAFRNIPGVETIS 228
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 138 bits (334), Expect = 4e-31
Identities = 68/134 (50%), Positives = 79/134 (58%), Gaps = 3/134 (2%)
Frame = +3
Query: 213 KNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 392
++ + V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 393 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV---QEIN 563
K WR+WH ARGH V +PE+PLV+S I
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIR 141
Query: 564 KTKQAVIFLRXIKA 605
KT AV L+ + A
Sbjct: 142 KTSAAVALLKAVGA 155
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 114 bits (274), Expect = 7e-24
Identities = 65/170 (38%), Positives = 83/170 (48%)
Frame = +3
Query: 90 PLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSA 269
P V V+ VA LP P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQVA--ELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 270 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 449
SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 61 HSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAV 114
Query: 450 XXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXI 599
+ARGH + +P +PLVV + KTK A+ ++ +
Sbjct: 115 ASALAASANAALVEARGHRIADVPSIPLVVD--TDNVTKTKDALAIIKAV 162
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 96.3 bits (229), Expect = 2e-18
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Frame = +3
Query: 138 SLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVR 317
++ LP F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+
Sbjct: 15 TVELPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVK 74
Query: 318 GGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQA 494
G +G+ A GG + APT P + W +
Sbjct: 75 GRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAALRSALAATAKPEFVKE 133
Query: 495 RGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXIKAW 608
RGH+++ +P LP+VV D+++ +NK ++ F + + W
Sbjct: 134 RGHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLW 171
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 89.8 bits (213), Expect = 2e-16
Identities = 57/171 (33%), Positives = 77/171 (45%)
Frame = +3
Query: 96 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 275
+ VY VA PL F+ PIRPDL+ ++S QP V + AG + S ES
Sbjct: 29 LKVYGIDGAYVADIEAPLHFL--EPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCES 86
Query: 276 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 455
+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 87 FGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRS 143
Query: 456 XXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXIKAW 608
ARGH+VEK+P LP+VV ++IN+ K+A + W
Sbjct: 144 AIAATAYRSWVAARGHVVEKVPSLPVVVVGDAEKINRAKEAKKLFEALGLW 194
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 82.6 bits (195), Expect = 3e-14
Identities = 36/115 (31%), Positives = 61/115 (53%)
Frame = +3
Query: 249 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 428
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 429 XXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLR 593
+RGH ++ + P+++ ++ I + ++ L+
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMIIDSILKYIWHPSELLMLLK 173
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 78.6 bits (185), Expect = 4e-13
Identities = 45/160 (28%), Positives = 76/160 (47%)
Frame = +3
Query: 96 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 275
++VYS K ++ + LP +F+ RPD++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITE--EIELPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Query: 276 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 455
+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 62 FGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRS 116
Query: 456 XXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQ 575
+ RGH V ++ ++P V+ D+++ + TK+
Sbjct: 117 AIAATANKELVEQRGHQVSELEQIPFVIDDEIETVKTTKE 156
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 75.8 bits (178), Expect = 3e-12
Identities = 47/97 (48%), Positives = 58/97 (59%)
Frame = +3
Query: 495 RGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXIKAWF*XP*SVQITAPACR*REKCXX 674
RG++V+ + E+PLVVSDK+QEINKTKQAVIFLR IKAW V + + K
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWS-DVLKVYKSQRLRAGKGKMRN 63
Query: 675 VVVXNAKDPLIIX**GQGS*LVHFXNIPGIQMLNXNK 785
+ K PLII QG F NIPG+ M+N NK
Sbjct: 64 RRRLHRKGPLIIYNKDQGL-TRSFRNIPGVDMVNVNK 99
Score = 54.8 bits (126), Expect = 6e-06
Identities = 40/104 (38%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Frame = +1
Query: 613 DXLKVYKSQRLRAGKGKNAXSXSCXTQRTPLSXYNKDKGPDSCISETFLASRCXTXTX*N 792
D LKVYKSQRLRAGKGK + ++ PL YNKD+G N
Sbjct: 44 DVLKVYKSQRLRAGKGK-MRNRRRLHRKGPLIIYNKDQGLTRSF-RNIPGVDMVNVNKLN 101
Query: 793 XLXLXPGXXSXXXYYLXQXPFXRLDPLXRSWK-XXQXKKXLXLP 921
L L PG Q F RLD + SWK + KK LP
Sbjct: 102 LLHLAPGGHVGRFMIWTQSAFERLDAIFGSWKTPSKEKKNFNLP 145
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 73.7 bits (173), Expect = 1e-11
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +3
Query: 180 DLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 326
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 72.1 bits (169), Expect = 4e-11
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Frame = +3
Query: 132 GASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG--TGRAVARI 305
G + LP VF P R DL+ + + + QP AG SA+S TG ARI
Sbjct: 13 GKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQARI 72
Query: 306 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 485
R++GGG R G+ RGGR P K + H
Sbjct: 73 ARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKST 132
Query: 486 XQARGHIVEKIPELPLVVSDKVQEINKTKQ 575
RGHI++ I ELP+V+SD ++ ++K +
Sbjct: 133 VAGRGHIIDGI-ELPIVISDDIESVSKASE 161
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 67.7 bits (158), Expect = 8e-10
Identities = 42/151 (27%), Positives = 67/151 (44%)
Frame = +3
Query: 147 LPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 326
LP +F P+R DL+ V ++ ++ QP AG +TSAES+G +AR+PRV+
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVK--- 81
Query: 327 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 506
SG+ A GGR+ P ++ +ARGH+
Sbjct: 82 --NSGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHV 139
Query: 507 VEKIPELPLVVSDKVQEINKTKQAVIFLRXI 599
+ P+VV+D + + T + FL+ I
Sbjct: 140 FKDSVRFPIVVTDDIVNLKTTSEVEEFLKKI 170
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 66.1 bits (154), Expect = 2e-09
Identities = 47/166 (28%), Positives = 70/166 (42%)
Frame = +3
Query: 102 VYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG 281
V + K EV + LP VF RPD++ +++ + RQPY + +G S E+WG
Sbjct: 5 VLNLKGEVTE--EIELPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWG 62
Query: 282 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXX 461
G AR+PR + G + GGR P KP R+W
Sbjct: 63 PGHGYARVPRWKLG-----RRAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAI 117
Query: 462 XXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXI 599
+ R H+ E ELP VVS++++ + +TK R I
Sbjct: 118 AATANEELVRQRSHVFE--GELPKVVSNELESVKRTKDVAEVFRAI 161
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 63.3 bits (147), Expect = 2e-08
Identities = 50/168 (29%), Positives = 66/168 (39%), Gaps = 9/168 (5%)
Frame = +3
Query: 132 GASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPR 311
GAS +P VF +PIR D+VN VH ++KN + + + A PR
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKNDSTTDEIQLCFLLDSQGKRTPCTDVPATKPR 74
Query: 312 VRGGGTHRSGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXXXX 464
G + +CR AP K WRRWH
Sbjct: 75 PSPGAP--VARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSAIA 132
Query: 465 XXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXIKAW 608
ARGH VE +PE+PLVV D I KT +AV L+ + A+
Sbjct: 133 ASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAY 180
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 60.9 bits (141), Expect = 9e-08
Identities = 39/101 (38%), Positives = 53/101 (52%)
Frame = +3
Query: 93 LVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAE 272
+V VY E+ S+ LP +F+ P+R DL+ +S QP AG +TSA
Sbjct: 15 IVPVYDERGG--EKDSVVLPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72
Query: 273 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 395
S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 57.6 bits (133), Expect = 8e-07
Identities = 43/168 (25%), Positives = 71/168 (42%)
Frame = +3
Query: 96 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 275
V +YS E+ + LP VF +R D++ ++S + RQPY S AG + +
Sbjct: 5 VPIYSVSGEMKG--EIDLPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHT 62
Query: 276 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 455
G ++R+PR+ GG A GG+ + + +
Sbjct: 63 TRPGLGISRMPRIAGGSRVVGIASAV-----GGKSAHSPRTTKNLYVKINDRERKMAKYS 117
Query: 456 XXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXI 599
+ RGH ++ +LP+VV D V+ INKTK A+ L+ +
Sbjct: 118 AIALTASVEAVKKRGHRFKEGLKLPIVVEDGVEGINKTKDAIALLKNL 165
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 54.4 bits (125), Expect = 8e-06
Identities = 42/151 (27%), Positives = 65/151 (43%)
Frame = +3
Query: 147 LPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 326
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGR 76
Query: 327 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 506
R Q GR P K + RGH
Sbjct: 77 ARRVPQAV------KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHE 130
Query: 507 VEKIPELPLVVSDKVQEINKTKQAVIFLRXI 599
++ E+P+VVSD +++ KT++ V L +
Sbjct: 131 FDR-DEVPVVVSDDFEDLVKTQEVVSLLEAL 160
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 51.6 bits (118), Expect = 6e-05
Identities = 20/39 (51%), Positives = 31/39 (79%)
Frame = +3
Query: 492 ARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXIKAW 608
++GH + ++PELPLVV DKV+ KT++AV+ L+ +KAW
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAW 40
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 47.2 bits (107), Expect = 0.001
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +3
Query: 492 ARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXIKAWF*XP*SVQITAPACR*REKCX 671
ARGH +E +PELPLV+ D + + KT A+ L+ A+ + + + K
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYL-DTEKAKDSHAIHPGKGKMR 60
Query: 672 XVVVXNAKDPLIIX**GQGS*LVH-FXNIPGIQMLNXNK 785
+ K PLI+ +G+ LV F NIPG+++ N ++
Sbjct: 61 NRRYISRKGPLIVY-GMEGAKLVKAFRNIPGVEVANVDR 98
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 44.4 bits (100), Expect = 0.008
Identities = 41/152 (26%), Positives = 55/152 (36%), Gaps = 7/152 (4%)
Frame = +3
Query: 120 EVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSK-------EAGHQTSAESW 278
E G ++ LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 279 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 458
G GR V+RI R G T A RGGR K + W
Sbjct: 101 GKGRGVSRIMRKAGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSA 155
Query: 459 XXXXXXXXXXQARGHIVEKIPELPLVVSDKVQ 554
RGH E P+++ V+
Sbjct: 156 IAASASSNLVSERGHHFEASLRFPIIIDGYVE 187
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 38.3 bits (85), Expect = 0.55
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 492 ARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRXIKA 605
ARGH +E + ELPLV+ D + ++KT + L+ + A
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGA 61
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 38.3 bits (85), Expect = 0.55
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -2
Query: 394 LVGANIRPPRHMLPNAPCP 338
LVGANI PPRHMLP AP P
Sbjct: 106 LVGANILPPRHMLPKAPWP 124
>UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 596
Score = 36.3 bits (80), Expect = 2.2
Identities = 36/110 (32%), Positives = 44/110 (40%), Gaps = 3/110 (2%)
Frame = -2
Query: 373 PPRHMLPNAPCPDLWV--PPPRTRGIRATARPVPQDSALV**PASLLTQ*GWRAFFDIDT 200
PP LP P PD +V PPP+ G A PVP L P L + G A F +
Sbjct: 352 PPGEALPPEPVPDSFVAEPPPQAAGFAPQAGPVPTLGELA--PLLPLAEAGAAATFSV-- 407
Query: 199 WTSLTRSGLMGALNTNGRGSEAPATTSLFS-EYTDTKGRATLVPNXLQPG 53
W + + G L G A + F E +GRAT P PG
Sbjct: 408 WPAGCSVRVEGQLLIRLEGLVAFSGNLTFQPEMKRFRGRATDKPFGEGPG 457
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 3.9
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 297 ARIPRVRGGGTHRSGQGAFGNMCRGG 374
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 5.1
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 207 MSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 377
+++ A ++E G A+SW TGRA A + R R GG R A N G R
Sbjct: 18 LARAAASSVAANREGGG--GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11;
Eurotiomycetidae|Rep: Similarity to other proteins -
Aspergillus niger
Length = 1372
Score = 34.3 bits (75), Expect = 8.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 385 ANIRPPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQDSA 266
AN P + P + P + VPPP + ATA P P +A
Sbjct: 635 ANQTPNNYPQPTSTTPSVQVPPPAAAAVAATASPAPAPAA 674
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 842,546,369
Number of Sequences: 1657284
Number of extensions: 14851120
Number of successful extensions: 43974
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 41163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43887
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 169780658975
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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