Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_C08_e443_06.seq
         (1508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    25   1.5  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    23   7.8  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = -2

Query: 205 ASIQNYLNIMYCIKSIWDTRSSVITHCNLLFG*SPAIQE*FPSARIYI 62
           A IQNY  ++   + +WD    ++T      G S  +    PS   Y+
Sbjct: 156 ADIQNYATLIKEFREVWDQHGLLLTAAVAAAGPSVDLSYHVPSLSKYL 203


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -3

Query: 390 THTIRRYMSSVMDLEIHYFEQISNLCHGQQHSMQSTLRRI 271
           T +IR  +++   + + Y      LCH +  S   T+R I
Sbjct: 156 TRSIRLTITASCPMNLQYLPMDRQLCHIEIESFGYTMRDI 195


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,857
Number of Sequences: 336
Number of extensions: 3944
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45271850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)