Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_C07_e435_05.seq
(1542 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104904-1|AAI04905.1| 1944|Homo sapiens anaphase promoting comp... 154 7e-37
BC104902-1|AAI04903.1| 1944|Homo sapiens anaphase promoting comp... 154 7e-37
AK023807-1|BAB14687.1| 1424|Homo sapiens protein ( Homo sapiens ... 154 7e-37
AJ278357-1|CAC19484.1| 1944|Homo sapiens Tsg24 protein protein. 154 7e-37
BC005089-1|AAH05089.1| 311|Homo sapiens ANAPC1 protein protein. 68 8e-11
>BC104904-1|AAI04905.1| 1944|Homo sapiens anaphase promoting complex
subunit 1 protein.
Length = 1944
Score = 154 bits (374), Expect = 7e-37
Identities = 77/180 (42%), Positives = 104/180 (57%), Gaps = 5/180 (2%)
Frame = +3
Query: 3 LFLGGGRATLGSSPGAVSALLAAFFPKFPTHSEDNRYHLQAFRHLYVLAVEPRLILPRDL 182
LFLGGGR +L +S +++ALL A +P FP HS DNRYHLQA RHLYVLA EPRL++P D+
Sbjct: 1565 LFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLLVPVDV 1624
Query: 183 DTGKLCYTHIQLVD-----LEGVVTEMKAPCILPELERLREVRINDPRYWPITFQRGRNW 347
DT CY +++ E E+ AP +LPEL L+++++ PRYW + +
Sbjct: 1625 DTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLIDLSKGT 1684
Query: 348 DQLXIFLKYTWCVDVKQRTGCLSYLDDPQGFLTXLSQTXTLXKXNVWSPTPENIELFTXD 527
L L + VK R G LSY +DP G+ + L+QT + PE I FT D
Sbjct: 1685 QHLKSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETISAFTSD 1744
>BC104902-1|AAI04903.1| 1944|Homo sapiens anaphase promoting complex
subunit 1 protein.
Length = 1944
Score = 154 bits (374), Expect = 7e-37
Identities = 77/180 (42%), Positives = 104/180 (57%), Gaps = 5/180 (2%)
Frame = +3
Query: 3 LFLGGGRATLGSSPGAVSALLAAFFPKFPTHSEDNRYHLQAFRHLYVLAVEPRLILPRDL 182
LFLGGGR +L +S +++ALL A +P FP HS DNRYHLQA RHLYVLA EPRL++P D+
Sbjct: 1565 LFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLLVPVDV 1624
Query: 183 DTGKLCYTHIQLVD-----LEGVVTEMKAPCILPELERLREVRINDPRYWPITFQRGRNW 347
DT CY +++ E E+ AP +LPEL L+++++ PRYW + +
Sbjct: 1625 DTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLIDLSKGT 1684
Query: 348 DQLXIFLKYTWCVDVKQRTGCLSYLDDPQGFLTXLSQTXTLXKXNVWSPTPENIELFTXD 527
L L + VK R G LSY +DP G+ + L+QT + PE I FT D
Sbjct: 1685 QHLKSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETISAFTSD 1744
>AK023807-1|BAB14687.1| 1424|Homo sapiens protein ( Homo sapiens cDNA
FLJ13745 fis, clone PLACE3000244, highly similar to
PROTEIN TSG24 (MEIOTIC CHECK POINT REGULATOR). ).
Length = 1424
Score = 154 bits (374), Expect = 7e-37
Identities = 77/180 (42%), Positives = 104/180 (57%), Gaps = 5/180 (2%)
Frame = +3
Query: 3 LFLGGGRATLGSSPGAVSALLAAFFPKFPTHSEDNRYHLQAFRHLYVLAVEPRLILPRDL 182
LFLGGGR +L +S +++ALL A +P FP HS DNRYHLQA RHLYVLA EPRL++P D+
Sbjct: 1045 LFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLLVPVDV 1104
Query: 183 DTGKLCYTHIQLVD-----LEGVVTEMKAPCILPELERLREVRINDPRYWPITFQRGRNW 347
DT CY +++ E E+ AP +LPEL L+++++ PRYW + +
Sbjct: 1105 DTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLIDLSKGT 1164
Query: 348 DQLXIFLKYTWCVDVKQRTGCLSYLDDPQGFLTXLSQTXTLXKXNVWSPTPENIELFTXD 527
L L + VK R G LSY +DP G+ + L+QT + PE I FT D
Sbjct: 1165 QHLKSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETISAFTSD 1224
>AJ278357-1|CAC19484.1| 1944|Homo sapiens Tsg24 protein protein.
Length = 1944
Score = 154 bits (374), Expect = 7e-37
Identities = 77/180 (42%), Positives = 104/180 (57%), Gaps = 5/180 (2%)
Frame = +3
Query: 3 LFLGGGRATLGSSPGAVSALLAAFFPKFPTHSEDNRYHLQAFRHLYVLAVEPRLILPRDL 182
LFLGGGR +L +S +++ALL A +P FP HS DNRYHLQA RHLYVLA EPRL++P D+
Sbjct: 1565 LFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLLVPVDV 1624
Query: 183 DTGKLCYTHIQLVD-----LEGVVTEMKAPCILPELERLREVRINDPRYWPITFQRGRNW 347
DT CY +++ E E+ AP +LPEL L+++++ PRYW + +
Sbjct: 1625 DTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLIDLSKGT 1684
Query: 348 DQLXIFLKYTWCVDVKQRTGCLSYLDDPQGFLTXLSQTXTLXKXNVWSPTPENIELFTXD 527
L L + VK R G LSY +DP G+ + L+QT + PE I FT D
Sbjct: 1685 QHLKSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETISAFTSD 1744
>BC005089-1|AAH05089.1| 311|Homo sapiens ANAPC1 protein protein.
Length = 311
Score = 68.1 bits (159), Expect = 8e-11
Identities = 33/95 (34%), Positives = 48/95 (50%)
Frame = +3
Query: 243 EMKAPCILPELERLREVRINDPRYWPITFQRGRNWDQLXIFLKYTWCVDVKQRTGCLSYL 422
E+ AP +LPEL L+++++ PRYW + + L L + VK R G LSY
Sbjct: 17 ELMAPTLLPELHLLKQIKVKGPRYWELLIDLSKGTQHLKSILSKDGVLYVKLRAGQLSYK 76
Query: 423 DDPQGFLTXLSQTXTLXKXNVWSPTPENIELFTXD 527
+DP G+ + L+QT + PE I FT D
Sbjct: 77 EDPMGWQSLLAQTVANRNSEARAFKPETISAFTSD 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,772,412
Number of Sequences: 237096
Number of extensions: 1820962
Number of successful extensions: 4573
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4569
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 23019836280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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