Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_C04_e411_06.seq
(1551 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep: S... 113 1e-23
UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protei... 79 4e-13
UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|R... 72 5e-11
UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n... 70 1e-10
UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30; Eukary... 70 2e-10
UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4; Magnoli... 64 9e-09
UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2; Tr... 51 7e-05
UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37; Eukary... 50 1e-04
UniRef50_UPI0000EB4B7C Cluster: UPI0000EB4B7C related cluster; n... 45 0.006
UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=... 42 0.033
UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to UBIQUITIN-... 40 0.18
UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n... 40 0.18
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 1.2
UniRef50_Q5D8K9 Cluster: SJCHGC02785 protein; n=1; Schistosoma j... 36 3.8
UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, wh... 36 3.8
UniRef50_A6NDN8 Cluster: Uncharacterized protein ENSP00000310146... 35 6.6
>UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep:
S30-ubiquitin-like - Suberites domuncula (Sponge)
Length = 134
Score = 113 bits (272), Expect = 1e-23
Identities = 59/132 (44%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Frame = +3
Query: 105 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL--S 278
MQ+ ++G + H ++V+ + + +K+ L L + E+ LS G PLED LV E+
Sbjct: 1 MQVFVQGGALHAINVSEETTFNQLKSELVLSEGITVEDQVLSYGGVPLEDDTLVCEIVPE 60
Query: 279 STELDLTVPLLGGKLHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQ 458
L L V ++GGK+HGSLARAGKV+GQTP +QYNRRFVNVV
Sbjct: 61 LATLSLAVRVVGGKVHGSLARAGKVRGQTPKVEAQEKKKKKTGRAKRRMQYNRRFVNVVA 120
Query: 459 TFGRRRGPNSNS 494
FGRRRGPNSN+
Sbjct: 121 QFGRRRGPNSNA 132
>UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protein
30; n=3; Caenorhabditis|Rep: Ribosomal protein, small
subunit protein 30 - Caenorhabditis elegans
Length = 130
Score = 78.6 bits (185), Expect = 4e-13
Identities = 50/135 (37%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Frame = +3
Query: 105 MQLHIRG--QSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL- 275
MQ+ + G +TH LDV+ ++ IK + EE ++S L + + E
Sbjct: 1 MQIFLLGLDNTTHTLDVDASTTLSAIKGVIGA-----GEEFSISYGSKVLSEELTLGECQ 55
Query: 276 --SSTELDLTVPLLGGKLHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVN 449
S + L + LLGGK+HGSLARAGKV+ QTP +QY RR+VN
Sbjct: 56 IESLSTLSVNGRLLGGKVHGSLARAGKVRAQTPKVDKQDKKKKKRGRAFRRVQYTRRYVN 115
Query: 450 VVQTFGRRRGPNSNS 494
V G++RGPNSNS
Sbjct: 116 VASGPGKKRGPNSNS 130
>UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|Rep:
40S ribosomal protein S30 - Homo sapiens (Human)
Length = 59
Score = 71.7 bits (168), Expect = 5e-11
Identities = 33/59 (55%), Positives = 40/59 (67%)
Frame = +3
Query: 318 KLHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPNSNS 494
K+HGSLARAGKV+GQTP +QYNRRFVNVV TFG+++GPN+NS
Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 59
>UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n=3;
Laurasiatheria|Rep: UPI0000F33F66 UniRef100 entry - Bos
Taurus
Length = 128
Score = 70.1 bits (164), Expect = 1e-10
Identities = 48/132 (36%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Frame = +3
Query: 114 HIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDS-----CLVSELS 278
H + Q H L V GQE + IK + A +E ++ L + G PLED C V LS
Sbjct: 4 HAQSQELHTLKVTGQEMVAQIKAHV---ASLEGKDQVLLLAGTPLEDEVTLGQCEVEALS 60
Query: 279 STELDLTVPLLGGKLHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQ 458
+ L++ +LGGK+HGSL AGKV+GQTP YN FV VV
Sbjct: 61 T--LEVVGRMLGGKVHGSLDCAGKVRGQTP--KVDKESKRRWGQAKRGTYYNPCFVKVVP 116
Query: 459 TFGRRRGPNSNS 494
+++G N +S
Sbjct: 117 HLKKKKGTNVSS 128
>UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30;
Eukaryota|Rep: 40S ribosomal protein S30 - Oryzias
latipes (Medaka fish) (Japanese ricefish)
Length = 59
Score = 69.7 bits (163), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%)
Frame = +3
Query: 318 KLHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPNSNS 494
K+HGSLARAGKV+GQTP IQYNRRFVNVV TFG+++G N+NS
Sbjct: 1 KVHGSLARAGKVRGQTPNVDKHEEKEEEDGRAKRRIQYNRRFVNVVPTFGKKKGANANS 59
>UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4;
Magnoliophyta|Rep: 40S ribosomal protein S30 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 62
Score = 64.1 bits (149), Expect = 9e-09
Identities = 30/59 (50%), Positives = 37/59 (62%)
Frame = +3
Query: 315 GKLHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPNSN 491
GK+HGSLARAGKV+GQTP +Q+NRRFV V FG++RGPNS+
Sbjct: 2 GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSS 60
>UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2;
Trichocomaceae|Rep: Ribosomal S30/ubiquitin fusion -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 78
Score = 51.2 bits (117), Expect = 7e-05
Identities = 25/54 (46%), Positives = 30/54 (55%)
Frame = +3
Query: 315 GKLHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRR 476
GK+HGSLARAGKVK TP ++Y RRFVNV T G+R+
Sbjct: 2 GKVHGSLARAGKVKSATPKVEKQEKKKEPKGRALKRLKYTRRFVNVTMTGGKRK 55
>UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37;
Eukaryota|Rep: 40S ribosomal protein S30 -
Schizosaccharomyces pombe (Fission yeast)
Length = 61
Score = 50.4 bits (115), Expect = 1e-04
Identities = 27/60 (45%), Positives = 31/60 (51%)
Frame = +3
Query: 315 GKLHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPNSNS 494
GK+HGSLARAGKVK QTP + Y RRFVNV G +R N +S
Sbjct: 2 GKVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRLLYVRRFVNVTNMVGGKRRMNPSS 61
>UniRef50_UPI0000EB4B7C Cluster: UPI0000EB4B7C related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB4B7C UniRef100
entry - Canis familiaris
Length = 104
Score = 44.8 bits (101), Expect = 0.006
Identities = 35/120 (29%), Positives = 49/120 (40%)
Frame = +3
Query: 135 HVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSELSSTELDLTVPLLG 314
H L V GQE + +K + L + E+ + + G PLED + +
Sbjct: 3 HTLKVTGQEMVAQMKAHVASLEGIAPEDQVVLLAGIPLEDEATLGQC------------- 49
Query: 315 GKLHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPNSNS 494
G A GKV+GQ P IQY+ FV VV TFG ++ N+NS
Sbjct: 50 ----GVEAPHGKVRGQAPKVAKQEKQKKKTGRAKRWIQYHWHFVTVVPTFG-KKDLNTNS 104
>UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=4;
Leishmania|Rep: 40S ribosomal protein S30, putative -
Leishmania major
Length = 66
Score = 42.3 bits (95), Expect = 0.033
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +3
Query: 315 GKLHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVN 449
GK+HGSLARAGKVK QTP ++Y RRF++
Sbjct: 2 GKIHGSLARAGKVKNQTPKVAKQEKPKQPRGRALKRLKYTRRFLS 46
>UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to
UBIQUITIN-LIKE PROTEIN FUBI; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to UBIQUITIN-LIKE
PROTEIN FUBI - Canis familiaris
Length = 166
Score = 39.9 bits (89), Expect = 0.18
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +3
Query: 105 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL--- 275
+QL +R H L+V G E+ IK + L +E+ + + G+PL ++ +
Sbjct: 17 VQLLVRAWELHTLEVTGLEAFAHIKTHVASLEGHTTEDKVVLLAGSPLPGEAILGQCGVE 76
Query: 276 SSTELDLTVPLLGGKLHGSLARAGKVKGQTP 368
+ L++ +LGG G+ R G ++ P
Sbjct: 77 ALATLEMVGRMLGGSGGGARMRTGALRQPPP 107
>UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB013B UniRef100
entry - Canis familiaris
Length = 109
Score = 39.9 bits (89), Expect = 0.18
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Frame = +3
Query: 105 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLED-----SCLVS 269
MQL + Q H L+V GQE++ IK + L + E+ + + G L D C
Sbjct: 1 MQLFVWTQELHTLEVTGQETVTQIKTYVASLESIAPEDQVMLLAGMTLMDGATLGQCGAE 60
Query: 270 ELSSTELDLTV--PLLGGKLHGSLARAGKVK 356
LS+ E+ +LGG+ H LA GK +
Sbjct: 61 ALSTLEVACCTFGDMLGGEEH--LACVGKAR 89
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.1 bits (82), Expect = 1.2
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 569 RGGARYPIRPIVSRIT 616
RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_Q5D8K9 Cluster: SJCHGC02785 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02785 protein - Schistosoma
japonicum (Blood fluke)
Length = 153
Score = 35.5 bits (78), Expect = 3.8
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +3
Query: 96 RYKMQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL 275
R ++ H+ G V+ ES+ +K+++ + + + +L G PL DS L+ EL
Sbjct: 2 RLLVRSHLGGSI--VVSAGPNESVKSLKDKISVATGIHASTQSLYHHGLPLLDSSLLEEL 59
Query: 276 SSTEL---DLTVPLLGG 317
T+L D+ LLGG
Sbjct: 60 DFTDLDNVDVNCELLGG 76
>UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 92
Score = 35.5 bits (78), Expect = 3.8
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 315 GKLHGSLARAGKVKGQTP-XXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFG----RRRG 479
GKLHG+LA+AGKV+ QTP I +NRRF + +R+G
Sbjct: 2 GKLHGTLAKAGKVRKQTPKIEKQVRRHKIPKGRAYKRICFNRRFGSAAAAGAGPQQKRKG 61
Query: 480 PN 485
PN
Sbjct: 62 PN 63
>UniRef50_A6NDN8 Cluster: Uncharacterized protein ENSP00000310146;
n=4; Euteleostomi|Rep: Uncharacterized protein
ENSP00000310146 - Homo sapiens (Human)
Length = 74
Score = 34.7 bits (76), Expect = 6.6
Identities = 17/72 (23%), Positives = 37/72 (51%)
Frame = +3
Query: 114 HIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSELSSTELD 293
++R + H L+V G E++ K + L + E+ + + G+PL++ + + E
Sbjct: 4 YVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQ-CGVEAL 62
Query: 294 LTVPLLGGKLHG 329
T+ ++G +L G
Sbjct: 63 TTLEVVGRRLGG 74
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 980,888,437
Number of Sequences: 1657284
Number of extensions: 15894246
Number of successful extensions: 31436
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 30326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31415
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 166151143700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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