Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_C03_e403_05.seq
         (1654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    37   5e-04
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   1.6  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   6.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 36.7 bits (81), Expect = 5e-04
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
 Frame = -1

Query: 424 VFXLCLY---LVHDLFPFHVLYLCVRDLYPDHDVHGPFPFHVLYFSYHLCLLDVENLYLL 254
           +F LC+Y       +F  H+L+ C    +   ++H  F   + YF+ HL  L     +  
Sbjct: 161 LFLLCIYHFFCAFIIFTMHLLFCCAFIFF---NMHLLFLLCLDYFTLHLLFLPCIYYFYS 217

Query: 253 IFFYLLTGCVFYCFLYPFLCAY 188
            F       +FYC L   LC Y
Sbjct: 218 AFIIFTIHLLFYCVLIILLCIY 239



 Score = 34.3 bits (75), Expect = 0.003
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
 Frame = -1

Query: 415 LCLYLVHDLFPFHVLYLCVRDLYPDHDVHGPFPFH--------VLYFSYHLCLLDVENLY 260
           L   L    F  H+L+ C   ++  H +   + F+        V YF Y   +  V  L+
Sbjct: 70  LLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLF 129

Query: 259 LLIFFYLLTGCVFYCFLYPFLCAY 188
           LL  +Y +    F   +Y F CA+
Sbjct: 130 LLCIYYFVVPLFFLLCIYYFYCAF 153



 Score = 30.3 bits (65), Expect = 0.043
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 14/115 (12%)
 Frame = -1

Query: 424 VFXLCLYLVHD---LFPFHVLYLCVRDL----YPDHDVHGPFPFHVL------YFSY-HL 287
           +F  C+Y  +    +F  H+L+ CV  +    Y  +     F  H+L      YF Y HL
Sbjct: 207 LFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHL 266

Query: 286 CLLDVENLYLLIFFYLLTGCVFYCFLYPFLCAYRCTCPFVALKWKCYPXXVLFRL 122
                  ++ +   +LL    FYC L   LC Y     F+      Y    L+ L
Sbjct: 267 LFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSLYPL 321



 Score = 28.3 bits (60), Expect = 0.17
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
 Frame = -1

Query: 421 FXLCLYLVHDLFPFHVLYLCVRDLYPDHDVHGPFPFHVLYFSYHLCL--LDVENLYLL-I 251
           F LC Y  +  F   ++ LCV   Y    +   F  H+L+    LC+    V   +LL I
Sbjct: 96  FLLCTYYFYYAF---IILLCVYYFYYAFII---FTVHLLFL---LCIYYFVVPLFFLLCI 146

Query: 250 FFYLLTGCVFYCFLYPFLCAYRCTCPFV 167
           +++     +F   L   LC Y   C F+
Sbjct: 147 YYFYCAFIIFTVHLLFLLCIYHFFCAFI 174



 Score = 28.3 bits (60), Expect = 0.17
 Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
 Frame = -1

Query: 496 LIFFMRMSVTTTVSYQDYVLYPCSVFXLCLYLVHDLFPFHVLYLCVRDLYPDHDVHGPFP 317
           L+F+  + +   + Y  Y     +V  L L  ++  +  H+L+ C   ++  H       
Sbjct: 226 LLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMH-----LL 280

Query: 316 FHVLYFSYHLCLLDVENLYLLIFFYLLTGCVFYC--FLYP 203
           F +  + ++  L+ +  +Y     +++    FYC   LYP
Sbjct: 281 FLLCIYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSLYP 320



 Score = 26.6 bits (56), Expect = 0.53
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
 Frame = -1

Query: 445 YVLYPCSVFXLCLYLVHD---LFPFHVLYL-CVRDLYPDHDVHGPFPFHVLYFSYHLCLL 278
           Y  Y   +  LC+Y  +    +F  H+L+L C+        V   F   + YF     + 
Sbjct: 101 YYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFV----VPLFFLLCIYYFYCAFIIF 156

Query: 277 DVENLYLLIFFYLLTGCVFYCFLYPFLCAY 188
            V  L+LL  ++     + +     F CA+
Sbjct: 157 TVHLLFLLCIYHFFCAFIIFTMHLLFCCAF 186


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 116 VCWTITTKLNLCLVPNYLQTRG 51
           V W I   L L L P+YLQT G
Sbjct: 10  VSWLILLSLLLGLYPSYLQTVG 31


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = -1

Query: 340 HDV-HGPFPFHVLYFSYHLC-LLDVENL 263
           H++ H P+P H +Y S +L  L +++NL
Sbjct: 340 HNIAHNPYPSHSIYPSSNLMPLNNIQNL 367


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,714
Number of Sequences: 336
Number of extensions: 3382
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 50188250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)