Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_C03_e403_05.seq
(1654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 54 2e-07
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 48 2e-05
10_02_0063 - 4849637-4850640,4854341-4854596,4854666-4855340 35 0.16
12_02_0806 - 23336329-23336511,23336658-23336781,23336817-233368... 35 0.21
06_03_1455 + 30264023-30264174,30265930-30266070,30266328-302664... 34 0.28
03_06_0311 + 33054022-33054118,33056109-33056353,33057058-330573... 33 0.65
02_03_0387 - 18412064-18412144,18412280-18412361,18412922-184131... 33 0.65
08_02_0526 + 18184146-18184168,18184247-18184438,18184846-181849... 32 1.5
12_02_1096 + 26050224-26051058,26051599-26051831,26051940-260522... 31 2.0
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 31 2.6
10_06_0158 - 11320173-11320279,11320347-11321038,11321283-113215... 31 2.6
07_01_0105 - 798883-798942,799118-799186,799282-799345,799434-79... 31 2.6
05_01_0539 + 4653028-4653158,4654329-4654973,4655323-4655448,465... 31 3.5
03_06_0670 + 35434203-35434355,35436601-35436729,35436978-354384... 31 3.5
12_02_0535 + 20117205-20117401,20118556-20118628,20118725-201187... 30 4.6
01_05_0164 + 18827390-18827710 29 8.0
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 54.4 bits (125), Expect = 2e-07
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Frame = +2
Query: 380 KRKKIVNEIKTKXKDGARIKNVVLIRDR-SRDRHSHKKD---KSLEKEAHKDYRSKS--R 541
K ++ + K K K+ R + R+R SR R ++D + E+ +DYR + R
Sbjct: 114 KERRSRDREKEKEKEKEREREREKDRERRSRSRSERRRDDEERDRERYRERDYRDRDVRR 173
Query: 542 GXXXXXXXXXXXXXXXXTVFCMQLSQRIRAKDLEEFFSSVGKVRDVRMITCXXTRRFKGI 721
TVF QLS + +D+ EFFS GKVRDVR+I +RR KG+
Sbjct: 174 RKEEAGEPEADPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGV 233
Score = 33.1 bits (72), Expect = 0.65
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 407 KTKXKDGARIKNVVLIRDRSRDRHSHKKDKSLEKEAHKDYRSKSR 541
+ + KD R ++ RDR RDR +KD+ E++ K+ RS+ R
Sbjct: 77 RDRDKDRDRHRSSRERRDRDRDRDRDEKDREKERDKDKERRSRDR 121
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 48.0 bits (109), Expect = 2e-05
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +2
Query: 593 TVFCMQLSQRIRAKDLEEFFSSVGKVRDVRMITCXXTRRFKGI 721
TVF QLS + +D+ EFFS GKVRDVR+I +RR KG+
Sbjct: 194 TVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGV 236
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +2
Query: 407 KTKXKDGARIKNVVLIRDRSRDR---HSHKKDKSLEKEAHKDYRSKSR 541
K + KDG + ++ +DRSRDR ++D+ E+++ ++ RS SR
Sbjct: 94 KDRGKDGEKDRSKEAEKDRSRDRDRDRDSERDRRRERDSGRERRSSSR 141
>10_02_0063 - 4849637-4850640,4854341-4854596,4854666-4855340
Length = 644
Score = 35.1 bits (77), Expect = 0.16
Identities = 25/89 (28%), Positives = 45/89 (50%)
Frame = +2
Query: 197 KKRIKKAVEDAAGQEIEEDQEIKILNVQETEMIRKIKNVKRKGTVNVVIGIKIADTEIKN 376
K+++++ E G +E+ IKI +E + I K N+ KG V ++AD ++
Sbjct: 332 KRKMREFFEKNGGPILEKVNNIKIFKKEELKPILKASNIIGKGGFGEVYKGRLADNKLVA 391
Query: 377 VKRKKIVNEIKTKXKDGARIKNVVLIRDR 463
VK+ VN + KD + N ++I+ R
Sbjct: 392 VKKSIKVNAAQ---KD--QFANEIIIQSR 415
>12_02_0806 -
23336329-23336511,23336658-23336781,23336817-23336879,
23336880-23336992,23337212-23337302,23337397-23337461,
23338279-23338323,23338500-23338692,23339381-23339544,
23339645-23339836
Length = 410
Score = 34.7 bits (76), Expect = 0.21
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -1
Query: 265 LYLLIFFYLLTGCVFYCFLYPFLCAYRCTCPFVALKWKCYPXXV 134
L+ L+ FY +C + PF C+Y C CP L P +
Sbjct: 280 LFWLLLFYRFGFMNHHCAVVPFFCSYACHCPMGGLLGAAVPLFI 323
>06_03_1455 +
30264023-30264174,30265930-30266070,30266328-30266430,
30266510-30266659,30267184-30267229,30267383-30267738
Length = 315
Score = 34.3 bits (75), Expect = 0.28
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = +2
Query: 461 RSRDRHSHKKDKSLEKEAHKDYRSKSRGXXXXXXXXXXXXXXXXTVFCMQLSQRIRAKDL 640
+SR R +S + D RS++R T++ LS R+ ++L
Sbjct: 64 KSRSRSRSPAARSQSRSPVPDPRSQARSRSRSREREPDAVNHGNTLYVTGLSSRVTEREL 123
Query: 641 EEFFSSVGKVRDVRMITCXXTRRFKG 718
+++FS G+V ++ TR +G
Sbjct: 124 KDYFSKEGRVTSCHVVLEPHTRVSRG 149
>03_06_0311 +
33054022-33054118,33056109-33056353,33057058-33057398,
33057488-33057538,33057623-33057695,33058229-33058333,
33060124-33060206,33061209-33061249,33061659-33063120,
33063368-33064847,33064958-33065122,33065232-33065424,
33065502-33065613,33065702-33065849,33065951-33066148,
33066234-33066512,33066612-33066773,33066872-33067090,
33067481-33067612
Length = 1861
Score = 33.1 bits (72), Expect = 0.65
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 218 VEDAAGQEIEEDQEIKILNV-QETEMIRKIKNVKRKGTVNVVIGIKIADTEIKN 376
++D + + ED++ K+ + QE E + +K ++GT I IKI +TEI N
Sbjct: 649 IKDGQDKGLTEDEDAKLARLLQEEEEWKMMKQRGKRGTSQKNIYIKICETEIAN 702
>02_03_0387 -
18412064-18412144,18412280-18412361,18412922-18413142,
18413387-18413745,18413834-18414443,18414546-18414605,
18414685-18414751,18414843-18414936,18415012-18415125,
18415242-18415308,18415386-18415551,18416587-18417080
Length = 804
Score = 33.1 bits (72), Expect = 0.65
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 455 RDRSRDRHSHKKDKSLEKEAHKDYRSKSRG 544
+DR +++ S +DKS E+ KDYR KSRG
Sbjct: 95 KDRDKEK-SRGRDKSKEEREDKDYRDKSRG 123
>08_02_0526 +
18184146-18184168,18184247-18184438,18184846-18184954,
18185071-18185220,18185973-18186136,18186273-18186359,
18187083-18187137,18187911-18188333
Length = 400
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 611 LSQRIRAKDLEEFFSSVGKVRDVRMITCXXTRRFKG 718
LS R+ +DLE+FFS GKV+ ++ T+ +G
Sbjct: 90 LSTRVTEEDLEKFFSKEGKVQSCHVVLDPRTKESRG 125
>12_02_1096 +
26050224-26051058,26051599-26051831,26051940-26052230,
26052860-26052988,26053082-26053255,26053334-26053547,
26053881-26053968,26054195-26054239,26056969-26057015,
26057441-26057727,26057812-26058051,26058141-26058257
Length = 899
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 362 TEIKNVKRKKIVNEIKTKXKDGARIKNVVLIRDRSRDRHSHK-KDKSLEKEAHKD 523
+E K+ ++K ++ K + KD K+ +DRS+D+ K KDK +K H D
Sbjct: 795 SESKDKEKKHKKHKDKDRDKDKEHKKHKHRHKDRSKDKDKDKDKDKKKDKSGHHD 849
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 31.1 bits (67), Expect = 2.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 455 RDRSRDRHSHKKDKSLEKEAHKDYRSKSR 541
+DR RDRH +D+S +E H RS R
Sbjct: 97 KDRDRDRHREHRDRSERREHHDRERSDDR 125
>10_06_0158 -
11320173-11320279,11320347-11321038,11321283-11321509,
11321521-11321611,11321839-11322125,11322428-11322523
Length = 499
Score = 31.1 bits (67), Expect = 2.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 720 FAYIXFKDAESGATGIRITWTXVTWCPNXCSTYAWR 827
+A++ F DA+S W TW PN C WR
Sbjct: 441 WAHVDFLDAQSNV----FAWLVCTWRPNACGKARWR 472
>07_01_0105 -
798883-798942,799118-799186,799282-799345,799434-799516,
799957-800022,800143-800233,800622-800779,801144-801338,
801499-801628,803016-803168,803877-803962
Length = 384
Score = 31.1 bits (67), Expect = 2.6
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +2
Query: 230 AGQEIEEDQEIKILNVQETEMIRKIKNVKRKGTVNVVIGIKIADTE------IKNVKRKK 391
+GQ D E + E + ++ V R V GI + + E +K VK+KK
Sbjct: 64 SGQTRSWDYEALTIRWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK 123
Query: 392 IVNEIKTKXKDGARIKNVVLIRDRSRDRHSHKKDKSLEKEAHKDYR 529
I EIK ++ N+V + D RD+HS E + D++
Sbjct: 124 IKREIKI-LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFK 168
>05_01_0539 +
4653028-4653158,4654329-4654973,4655323-4655448,
4655537-4655813,4655916-4656143
Length = 468
Score = 30.7 bits (66), Expect = 3.5
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -1
Query: 313 HVLYFSYHLCLLDVENLYLLIFFYLLTGCVFYCFLYPFLCAYRCTC 176
+V F H D NLY L +L C+ Y + LCA C C
Sbjct: 283 NVWVFGGHSSAHDAPNLYRLCIAFLTFSCIGYAMPF-ILCALICCC 327
>03_06_0670 +
35434203-35434355,35436601-35436729,35436978-35438409,
35438524-35439014
Length = 734
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2
Query: 335 VVIGIKIADTEIKNVKRKKIVNEIKTKXKDGARIKNVVLIRDRSRDRHSHKKDKSLEKEA 514
+ I + A + K K KK ++ + K+G K+ ++RS+D+H KKD+ KE
Sbjct: 86 IYISVTAASEKHKEKKHKK--DKKDKERKEGKDKKD----KERSKDKHRDKKDR---KEK 136
Query: 515 HKD 523
HKD
Sbjct: 137 HKD 139
>12_02_0535 +
20117205-20117401,20118556-20118628,20118725-20118787,
20119167-20119220,20119303-20119359,20119615-20119707
Length = 178
Score = 30.3 bits (65), Expect = 4.6
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 455 RDRSRDRHSHKKDKSLEKEAHKDYRSK 535
R+RS+DRHS K+DKS KE + + S+
Sbjct: 94 RERSKDRHS-KRDKSKHKELYTEENSE 119
>01_05_0164 + 18827390-18827710
Length = 106
Score = 29.5 bits (63), Expect = 8.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 738 KDAESGATGIRITWTXVTWCPNXCSTYAWR 827
K+A GA G +I W+ TW P+ T + R
Sbjct: 31 KEAAVGARGFQIRWSRTTWRPDLAPTTSRR 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,664,809
Number of Sequences: 37544
Number of extensions: 378850
Number of successful extensions: 1132
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 14,793,348
effective HSP length: 86
effective length of database: 11,564,564
effective search space used: 5365957696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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