Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_C03_e403_05.seq
(1654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 56 1e-07
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 56 1e-07
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 41 0.002
Z73906-4|CAA98117.1| 508|Caenorhabditis elegans Hypothetical pr... 35 0.19
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 34 0.34
Z69662-6|CAA93501.1| 283|Caenorhabditis elegans Hypothetical pr... 32 1.0
U23528-5|AAY55840.1| 78|Caenorhabditis elegans Hypothetical pr... 32 1.0
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 32 1.4
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 32 1.4
Z82075-1|CAB04930.1| 320|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 31 2.4
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z81593-5|CAB04743.1| 332|Caenorhabditis elegans Hypothetical pr... 31 3.1
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 31 3.1
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 31 3.1
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 31 3.1
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z81463-3|CAB03847.1| 307|Caenorhabditis elegans Hypothetical pr... 30 5.5
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 29 7.2
Z98866-18|CAB11555.2| 387|Caenorhabditis elegans Hypothetical p... 29 7.2
U29535-3|AAK31458.1| 556|Caenorhabditis elegans Hypothetical pr... 29 7.2
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 29 7.2
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 29 7.2
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 29 9.6
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 55.6 bits (128), Expect = 1e-07
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = +2
Query: 593 TVFCMQLSQRIRAKDLEEFFSSVGKVRDVRMITCXXTRRFKGIC 724
T+ MQ+++ R +DLEEFFS+VG VRDVR+IT T R KGIC
Sbjct: 26 TLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGIC 69
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 55.6 bits (128), Expect = 1e-07
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = +2
Query: 593 TVFCMQLSQRIRAKDLEEFFSSVGKVRDVRMITCXXTRRFKGIC 724
T+ MQ+++ R +DLEEFFS+VG VRDVR+IT T R KGIC
Sbjct: 171 TLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGIC 214
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 41.1 bits (92), Expect = 0.002
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Frame = +2
Query: 161 QSNERTSTPISTKKRIKKAVEDAAGQEIEEDQEIKILNV-QETEMIRKIKNVKRKGTVNV 337
+ ER +++ +K EDAA +EIEE E+ V +E E RK K +R+
Sbjct: 144 KERERDERKERERQQKEKEREDAARREIEEKAEMDAKRVAEEEEERRKEKEKRREEKKKQ 203
Query: 338 VIGIKIADTEIKNVKRKKIVNEIKTKXKDGARIKNVVLIRDRSRDRHSHKKDKSLEKEAH 517
+K + + K +++ E K K ++ R K R++ R++ +K K EKE
Sbjct: 204 KELLKEKERSERKEKERELERE-KEKSREKEREKEREKEREKEREK-EREKQKEREKERE 261
Query: 518 KDYRSKSR 541
K+ R K +
Sbjct: 262 KE-REKEK 268
>Z73906-4|CAA98117.1| 508|Caenorhabditis elegans Hypothetical
protein D2030.3 protein.
Length = 508
Score = 34.7 bits (76), Expect = 0.19
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Frame = +2
Query: 149 TLPLQSNERTSTPISTKKRIKKAVE-DAAGQEIE-EDQEIKILNVQETEMIRKIKNVKRK 322
TL L+ P + + +K+ E + +E+E ED+E +I+ V + I ++ +
Sbjct: 401 TLVLKEENTIQAPTAASEDLKEKEEVEQEFEEMETEDKEEEIVPVVVEKKIEEVPEASSR 460
Query: 323 GTVNVVIGIKIADTEIKNVKRKKIVNEIKTKXKDG-ARIKNVVLIRDRS 466
N T K K+K +VN++KT +G A + +++ + D S
Sbjct: 461 KKKNSESSTTATSTVAKK-KKKSVVNDVKTNLLEGEASVDDILNLFDMS 508
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 33.9 bits (74), Expect = 0.34
Identities = 29/105 (27%), Positives = 50/105 (47%)
Frame = +2
Query: 209 KKAVEDAAGQEIEEDQEIKILNVQETEMIRKIKNVKRKGTVNVVIGIKIADTEIKNVKRK 388
K+ ED +E E+D++ K +E + + K+ K+K N + + K+ K+K
Sbjct: 130 KQEEEDKKKEEEEKDKKKKDKKKEEDDEEEEQKDKKKKDEKN---DDDDEEDKKKDKKKK 186
Query: 389 KIVNEIKTKXKDGARIKNVVLIRDRSRDRHSHKKDKSLEKEAHKD 523
K N+ + K KD + K+ D D + KKDK +K+ D
Sbjct: 187 KDDNDEEEKEKDKKK-KDKKKDDDDDEDENDKKKDKKKKKDDKDD 230
>Z69662-6|CAA93501.1| 283|Caenorhabditis elegans Hypothetical
protein F56D5.10 protein.
Length = 283
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -1
Query: 382 FHVLYLCVRDLYPDHDVHGPFPFHVLYFSYHLCLLDVENLYLLIFFYL 239
+ +LYL +R LYP H + PF + SY L LL + +L ++F L
Sbjct: 206 YEILYLHMR-LYPQHFEN--LPFELQTISYDLRLLAISSLNFFVYFVL 250
>U23528-5|AAY55840.1| 78|Caenorhabditis elegans Hypothetical
protein B0034.7 protein.
Length = 78
Score = 32.3 bits (70), Expect = 1.0
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 260 IKILNVQETEMIRKIKNVKRKGTVNVVIGIKIADTEIKNVKRKK 391
+KI N + T + RK K KGT N G K+ T+ N+K++K
Sbjct: 30 LKIENSKFTLLDRKTKRAVAKGTKNYGAGGKVKTTKSTNIKKQK 73
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 31.9 bits (69), Expect = 1.4
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +2
Query: 188 ISTKKRIKKAVEDAAGQEIEE-DQEIKILNVQETEMIRKIKNVKRKGTVNVVIGIKIADT 364
I +++IKK VE+A ++ EE ++ K + E + + R +VV D
Sbjct: 269 IDKEEKIKKEVEEAEKKKKEEKEKRRKEVKKNREEQLSINPEMSRNDKKDVVEEKSCLDK 328
Query: 365 EIKNVKRKKIVNEIKTKXKDGARIKNVVLIRDRSRDRH-SHKK 490
K+ ++KK ++ K K+ ++K + + SR R SH++
Sbjct: 329 GAKDAQKKKKQQDVVDKKKEKRKLKKTRTM-EASRSREVSHEE 370
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 31.9 bits (69), Expect = 1.4
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +2
Query: 179 STPISTKKRIKKAVEDAAGQEIEEDQEIKILNVQETEMIRKIKNVKRKGTVNVVIGIKIA 358
STP++ R + D + ++ EED EI ++ E K V + VV IKI
Sbjct: 384 STPVTAVPRGVPNLVDTSSEDEEEDVEI----IKPIEQPEKASEVLVEPIKKVVSSIKIN 439
Query: 359 DTEIKNVKRKK 391
E+K+V++ K
Sbjct: 440 GIEVKDVEKTK 450
>Z82075-1|CAB04930.1| 320|Caenorhabditis elegans Hypothetical
protein W07A8.1 protein.
Length = 320
Score = 31.5 bits (68), Expect = 1.8
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = -1
Query: 382 FHVLYLCVRDLYPDHDVHGPFPFHVLYFSYHLCLLDVENLYLLIFFYLLTGCVFYCFLYP 203
+ +LYL +R LYP+ PF F + +Y L LL V +L ++F +LT L
Sbjct: 245 YEILYLQIR-LYPESFNSAPFEFQTI--TYSLRLLAVGSLNFCVYF-VLTKSTRAMVLKF 300
Query: 202 FLCAYRCTCPFVALKWKCYP 143
+ P V+ KC+P
Sbjct: 301 LGYKTQTRAPTVSQTAKCHP 320
>Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical
protein T05F1.7 protein.
Length = 484
Score = 31.1 bits (67), Expect = 2.4
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Frame = +2
Query: 131 QXXXRITLPLQSNERTSTPISTKKRIKKAVEDAAGQEIEEDQEIKILNVQETEMIRKIKN 310
Q I+LP Q IS K R +A EI+E ++ Q E++R + N
Sbjct: 47 QEQIEISLPFQKMINLEKQIS-KNRDNLLTFEATVSEIQE--KLPQRQKQIDEILRAL-N 102
Query: 311 VKRKGTV---NVVIGIKIADTE----IKNVKRKKIVNEIKTKXKDGARIKNVVLIRDRSR 469
KR+ + N + G ++ TE K K KK ++E+K K +++ + R RS
Sbjct: 103 EKRREVLQKQNEIAGFRVNRTENSMKSKMEKAKKKLDEMKKKKI----VQDKKISRLRSD 158
Query: 470 DRHSHKKDKSLEKEAHKD 523
S K +EK+ HK+
Sbjct: 159 IARSEKSFDKVEKDIHKE 176
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 31.1 bits (67), Expect = 2.4
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 596 VFCMQLSQRIRAKDLEEFFSSVGKVRDV 679
++ +L+ R+ KD+E FF G++RDV
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 31.1 bits (67), Expect = 2.4
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 596 VFCMQLSQRIRAKDLEEFFSSVGKVRDV 679
++ +L+ R+ KD+E FF G++RDV
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 31.1 bits (67), Expect = 2.4
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 596 VFCMQLSQRIRAKDLEEFFSSVGKVRDV 679
++ +L+ R+ KD+E FF G++RDV
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 31.1 bits (67), Expect = 2.4
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Frame = +2
Query: 200 KRIKKAVEDAAG-QEIEEDQEIKILNVQETEMIRKIK----NVKRKGTVNVVIGIKIADT 364
K+I AV AA +IEE +++ E I K+K + +GTV V+ K
Sbjct: 523 KKISSAVMKAAKIHKIEEADKVQDEQAMEKFNIAKVKADSEEAESEGTVEVLKSAKEGKA 582
Query: 365 EI--KNVKRKKIVNEIKTKXKDGARIKNVVLIRDRSRDRHSHKKDKSLEKE 511
EI KN ++K E + K K + + ++ +H + K EK+
Sbjct: 583 EIKEKNREKKDAKEESSSDDKKSTDEKKKEIKKIEKTNKVNHDEPKKEEKK 633
>Z81593-5|CAB04743.1| 332|Caenorhabditis elegans Hypothetical
protein T20B3.5 protein.
Length = 332
Score = 30.7 bits (66), Expect = 3.1
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = -1
Query: 421 FXLCLYLVHDLFPFHVLYLCVRDLYPDHDVHGPFPFHVLYFSYHLCLLDVENLYLLIF-- 248
F L +Y++H +FP VL V+ PD G F +L + +D+E ++ LI
Sbjct: 136 FALPIYIIHYIFPTIVLPSLVK--LPDQQT-GKANF-LLKYGCVPPYVDLERVFYLIITK 191
Query: 247 -FYLLTGCVFYCFLY 206
++L+T VF C ++
Sbjct: 192 RYFLITCAVFICTMF 206
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 30.7 bits (66), Expect = 3.1
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 371 KNVKRKKIVNEIKTKXKDGARIKNVVLIRDRSRDRHSHKKDKSLEKEAHKD 523
KN K + K K +D R RDR R + ++K+KS KE+ +D
Sbjct: 169 KNCPMKLQAPKTKVKREDKKRDDRKDYERDRERRKDDYEKEKSKRKESDRD 219
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical protein
C01G6.5 protein.
Length = 952
Score = 30.7 bits (66), Expect = 3.1
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Frame = +2
Query: 155 PLQSNERTSTPISTKKRIKKAVEDAAGQEIEEDQEIKILNVQETEMIRKIKNVKRKGTVN 334
P +S++R S++K +K+ E +A + E+D + + + R+ + K T
Sbjct: 722 PAESSKRKQKDTSSRK-MKQLDESSADSDSEDDGRSGDKSTKRRDKARRSTRIG-KSTPA 779
Query: 335 VVIGIKIADTEIKNVKRKKIVNEIKTKXKDGARIKNVVLIRDRSRDRHSHKKDKSLE-KE 511
+G K + +++ V E + G R KN+ +S + KDK +E +E
Sbjct: 780 KKVGKK--EKVVEDEDETDDVQEEEKVTPRGGRRKNMKRTASQSAIKERKTKDKDVEPEE 837
Query: 512 AHKDYRSKSR 541
A K R + +
Sbjct: 838 APKKKRGRKK 847
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 30.7 bits (66), Expect = 3.1
Identities = 26/128 (20%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Frame = +2
Query: 161 QSNERTSTPISTKKRIKKAVEDAAGQEIEEDQEIKILNVQETEMIRKIKNVKRKGTVNVV 340
+S+ TP K+R K + D + I +++ ++ + RK+ +R V
Sbjct: 799 ESSFTVLTPSDEKRR--KLIRDVEVRAIAMLDDLEA--DRDPDAKRKVDEFRRCEMEKVE 854
Query: 341 IGIKIADTEIKNVK-RKKIVNEIKTKXKDGARIKNVVLIRDRSRDRHSHKKDKSLEKEAH 517
++ +++ + K +K + K + K+ R ++ RDR R R +D+S +++
Sbjct: 855 KALRSGESKKSDEKSERKSEKKEKKRDKERKRSRSRSRDRDRDRSRRDRSRDRSRDRDRD 914
Query: 518 KDYRSKSR 541
+D + R
Sbjct: 915 RDRDRRDR 922
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
F54B3.1b protein.
Length = 3394
Score = 30.3 bits (65), Expect = 4.1
Identities = 20/89 (22%), Positives = 41/89 (46%)
Frame = +2
Query: 158 LQSNERTSTPISTKKRIKKAVEDAAGQEIEEDQEIKILNVQETEMIRKIKNVKRKGTVNV 337
L+S P K + V ++ + I E+ + + + E + + K + ++
Sbjct: 2815 LRSEWNKDAPRRAGKLFDEVVRESDIRSILEEPLKEFVEIYEVQKAKMTKQLMKRKYSEK 2874
Query: 338 VIGIKIADTEIKNVKRKKIVNEIKTKXKD 424
+ I+I+D IKN +RK+ IK K ++
Sbjct: 2875 NVEIQISDIIIKNEERKRGEEMIKIKDEE 2903
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
F54B3.1a protein.
Length = 3396
Score = 30.3 bits (65), Expect = 4.1
Identities = 20/89 (22%), Positives = 41/89 (46%)
Frame = +2
Query: 158 LQSNERTSTPISTKKRIKKAVEDAAGQEIEEDQEIKILNVQETEMIRKIKNVKRKGTVNV 337
L+S P K + V ++ + I E+ + + + E + + K + ++
Sbjct: 2815 LRSEWNKDAPRRAGKLFDEVVRESDIRSILEEPLKEFVEIYEVQKAKMTKQLMKRKYSEK 2874
Query: 338 VIGIKIADTEIKNVKRKKIVNEIKTKXKD 424
+ I+I+D IKN +RK+ IK K ++
Sbjct: 2875 NVEIQISDIIIKNEERKRGEEMIKIKDEE 2903
>Z81463-3|CAB03847.1| 307|Caenorhabditis elegans Hypothetical
protein C06B8.4 protein.
Length = 307
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 430 CSVFXLCLYLVHDLFPFHVLYLCVRDLYPDHDVHGPFPFHVLY 302
C+ F + LYL+ FH +Y + DL PD FP+ +++
Sbjct: 91 CAAFAMTLYLL----AFHFVYRYLADLKPDQLYFFTFPYSLIF 129
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 29.5 bits (63), Expect = 7.2
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = +2
Query: 209 KKAVEDAAGQEIEEDQEIKILNVQETEMIRKIKNVKRKGTVNVVIGIKIA-DTEIKNVKR 385
KKA ++A + D+E K ET+ + KR+ +A + + +++
Sbjct: 189 KKAEQNAQDNQKYHDEERK--KHIETQKKAEENEEKRRAKEKADRDAHVARHKQAEALEK 246
Query: 386 KKIVNEIKTKXKDGARIKNVVLIRDRSRDRHSHKKDKSLEKEAHKDYRSKSR 541
KK E K K +D R R R + + K+LEKE H+ + +
Sbjct: 247 KKREQEEKQKNEDRERATQKERREHIERHRQAEARAKALEKEKHEQEEKQKK 298
>Z98866-18|CAB11555.2| 387|Caenorhabditis elegans Hypothetical
protein Y49E10.21 protein.
Length = 387
Score = 29.5 bits (63), Expect = 7.2
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 197 KKRIKKAVEDAAGQEIEEDQEIKILNV-QETEMIRKIKNVKRKGTVNVVIGIKIADTEIK 373
++R++K +E+A G E+ E + + Q+ ++K+K K + +K E+K
Sbjct: 5 QERLEK-LENATGSEVWEVLKASEPELRQDLSSLQKLKADKESAAREALTALKTKKNELK 63
Query: 374 NVKR--KKIVNEIKT 412
N+K + + NE KT
Sbjct: 64 NLKNDVESLKNEYKT 78
>U29535-3|AAK31458.1| 556|Caenorhabditis elegans Hypothetical
protein C25H3.6a protein.
Length = 556
Score = 29.5 bits (63), Expect = 7.2
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +2
Query: 110 SILHQPEQXXXRITLPLQSNERTSTPISTKKRIKKAVEDAAGQEIEEDQEIKILNVQETE 289
SI P T +Q ER + +K ++A+ +E EE++E +I++ +
Sbjct: 389 SIRSIPRSTTPPPTARMQEKEREKEEMKREKERQEAIRR---REQEEEEEEEIVDDKPKP 445
Query: 290 MIRKIKNVKR--KGTVNVVIGIKIADTEIKNVKRKKIVNEIKTKXKDGARIKNV 445
++ K+K+ K + I ++A+ E K V V+ +KTK KD +++ V
Sbjct: 446 VLSKLKDWKSLIPSMEELRIRAQLAEKETKKVLE---VSAVKTK-KDPTKVQLV 495
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.5 bits (63), Expect = 7.2
Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Frame = +2
Query: 161 QSNERTSTPISTKKRIKKAVEDAAGQEIEEDQEIKILNVQETEMIRKIKNVKRKGTVNVV 340
+S ++ P+ K ED+ G+ E+DQ+ K Q+ + +K K K K
Sbjct: 150 KSKKKKEKPVE-KPEEPAVEEDSDGEGDEKDQDKKDKKKQKKKDKKKEKEKKEKEDKKGG 208
Query: 341 IGIKIADTEI--KNVKRKKIVNEIKTKXKDGARIKNVVLIRDRSRDRHSHKKDKSLEKEA 514
G K + + + +K+++ E + + + + ++ ++R H+ K+ K KEA
Sbjct: 209 AGAKKGNLSLIKEMLKKQQEEREEQERLQKEQQERDAQEEKERLEREHAEKERKEAAKEA 268
Query: 515 HK 520
+
Sbjct: 269 KR 270
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 29.5 bits (63), Expect = 7.2
Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Frame = +2
Query: 161 QSNERTSTPISTKKRIKKAVEDAAGQEIEEDQEIKILNVQETEMIRKIKNVKRKGTVNVV 340
+S ++ P+ K ED+ G+ E+DQ+ K Q+ + +K K K K
Sbjct: 150 KSKKKKEKPVE-KPEEPAVEEDSDGEGDEKDQDKKDKKKQKKKDKKKEKEKKEKEDKKGG 208
Query: 341 IGIKIADTEI--KNVKRKKIVNEIKTKXKDGARIKNVVLIRDRSRDRHSHKKDKSLEKEA 514
G K + + + +K+++ E + + + + ++ ++R H+ K+ K KEA
Sbjct: 209 AGAKKGNLSLIKEMLKKQQEEREEQERLQKEQQERDAQEEKERLEREHAEKERKEAAKEA 268
Query: 515 HK 520
+
Sbjct: 269 KR 270
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 29.1 bits (62), Expect = 9.6
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +2
Query: 350 KIADTEIKNVKRKKIVNEIKTKXKDGARIKNVVLIRDRSRDRHSHKKDKSLEKEAHKDYR 529
K AD E K + K KT+ KD +K + +D KKD+ E E ++ +
Sbjct: 78 KKADDEKKKTEEKDDKKSKKTEEKDKISVKKTQETKSERKD----KKDEKKEDEKKEESK 133
Query: 530 SKSR 541
KS+
Sbjct: 134 EKSK 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,324,603
Number of Sequences: 27780
Number of extensions: 334373
Number of successful extensions: 1228
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4826187570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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