Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_C02_e395_06.seq
         (1556 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB71AA Cluster: PREDICTED: similar to Homeobox p...   102   3e-20
UniRef50_UPI0000D565F3 Cluster: PREDICTED: similar to Homeobox p...    95   4e-18
UniRef50_Q171L7 Cluster: Putative uncharacterized protein; n=1; ...    60   2e-07
UniRef50_P10180 Cluster: Homeobox protein cut; n=6; melanogaster...    46   0.003
UniRef50_Q8G4A2 Cluster: Putative uncharacterized protein; n=1; ...    34   8.8  

>UniRef50_UPI0000DB71AA Cluster: PREDICTED: similar to Homeobox
            protein cut; n=2; Apocrita|Rep: PREDICTED: similar to
            Homeobox protein cut - Apis mellifera
          Length = 1936

 Score =  102 bits (244), Expect = 3e-20
 Identities = 61/120 (50%), Positives = 74/120 (61%), Gaps = 9/120 (7%)
 Frame = +3

Query: 114  KDQSGGLDLSM-PLKRXXXXXXXXXXXXX--SNLGSEDSLDDES---KTEPKAAST-PQG 272
            K+Q  GLDLSM  LKR               SNLGSEDS +  +   K EP    T P  
Sbjct: 1746 KEQCSGLDLSMNALKREPNQEFEDEDAEDAMSNLGSEDSEEGSAGSIKREPAETPTAPTA 1805

Query: 273  GRSSRRKPAAPQWVNPDWQDEKPRXPDXVIINGVCVMRSXDF--XRESXETVRVEPSPVR 446
             RS+RRKPAAPQWVNP+WQ+      D VIINGVCVM++ D+   RE+ ET+RVEP+PV+
Sbjct: 1806 VRSNRRKPAAPQWVNPEWQEPARGAGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQ 1865


>UniRef50_UPI0000D565F3 Cluster: PREDICTED: similar to Homeobox
            protein cut; n=1; Tribolium castaneum|Rep: PREDICTED:
            similar to Homeobox protein cut - Tribolium castaneum
          Length = 1287

 Score = 95.1 bits (226), Expect = 4e-18
 Identities = 58/114 (50%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
 Frame = +3

Query: 114  KDQSGGLDLSMP-LKRXXXXXXXXXXXXXSNLGSEDSLDDESKTEPKAASTPQGGRSSRR 290
            K+Q  GLDLSM  LKR                  +D  DD+ ++     + P  GRSSRR
Sbjct: 1138 KEQMSGLDLSMTGLKREP---------------GDDFDDDDVESNRAKEAPPSQGRSSRR 1182

Query: 291  KPAAPQWVNPDWQDEKPRXP--DXVIINGVCVMRSXDF-XRESXETVRVEPSPV 443
            KPAAPQWVNPDWQD     P  D VIINGVCVM++ D+  R S ETVRVEP+PV
Sbjct: 1183 KPAAPQWVNPDWQDPDKDKPSGDEVIINGVCVMQTEDYGRRSSEETVRVEPTPV 1236


>UniRef50_Q171L7 Cluster: Putative uncharacterized protein; n=1; Aedes
            aegypti|Rep: Putative uncharacterized protein - Aedes
            aegypti (Yellowfever mosquito)
          Length = 1502

 Score = 59.7 bits (138), Expect = 2e-07
 Identities = 41/108 (37%), Positives = 55/108 (50%), Gaps = 17/108 (15%)
 Frame = +3

Query: 117  DQSGGLDLSMPLK-RXXXXXXXXXXXXXSNLGSEDSLDDESKT----EPKAASTPQG--- 272
            +Q  GLDLSMP   +              ++   +S+D  ++     E  AAS       
Sbjct: 1292 EQMSGLDLSMPSSVKREGEEDFDEDGESGHMSDSESVDGGARRGDGDEHSAASLSLAQAM 1351

Query: 273  ---GRSSRRKPAAPQWVNPDWQDEK-PRXP-----DXVIINGVCVMRS 389
                R +RRKPAAPQWVNPDWQD+K P  P     D  ++NGVC+M+S
Sbjct: 1352 SAMSRINRRKPAAPQWVNPDWQDDKNPGIPGGEKKDGDLLNGVCMMQS 1399


>UniRef50_P10180 Cluster: Homeobox protein cut; n=6; melanogaster
            subgroup|Rep: Homeobox protein cut - Drosophila
            melanogaster (Fruit fly)
          Length = 2175

 Score = 46.0 bits (104), Expect = 0.003
 Identities = 46/134 (34%), Positives = 57/134 (42%), Gaps = 32/134 (23%)
 Frame = +3

Query: 114  KDQSGGLDLSMP-LKRXXXXXXXXXXXXXS---NLGSEDSLDD---ESKTEP-------- 248
            K+Q  GLDLSMP LKR                 NL   +SL+    E KT          
Sbjct: 1905 KEQMSGLDLSMPTLKRERSDDYQDDLELEGGGHNLSDNESLEGQEPEDKTTDYEKVLHKS 1964

Query: 249  ----KAASTPQGGRSSRRKPAAPQWVNPDWQDEKP-------------RXPDXVIINGVC 377
                 AA      RSSRRKPAAPQWVNP      P                +  IINGVC
Sbjct: 1965 ALAAAAAYMSNAVRSSRRKPAAPQWVNPAGAVTNPSAVVAAVAAAAAAAADNERIINGVC 2024

Query: 378  VMRSXDFXRESXET 419
            VM++ ++ R+  ++
Sbjct: 2025 VMQASEYGRDDTDS 2038


>UniRef50_Q8G4A2 Cluster: Putative uncharacterized protein; n=1;
           Bifidobacterium longum|Rep: Putative uncharacterized
           protein - Bifidobacterium longum
          Length = 218

 Score = 34.3 bits (75), Expect = 8.8
 Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
 Frame = -3

Query: 498 KGEXWCXXGXWRGGXVXXAPAKAP--REPSPPILX*SRXFSLHRRR**SPXRXCVASRPA 325
           +G+ W   G + G     A A+ P  R P+ P     R    +RRR  +  R      P 
Sbjct: 108 RGQLWHGVGPFIGSGRCRAVARGPGSRAPTSPETRNHRSSRRNRRR--NGIRRRTGRNPG 165

Query: 324 NQG*P---TVALQVSVCSS-VPPEASTPPSAQSLIRHPTSPR 211
            +      T A+ VS CS+  PP+   PP A S  R P S R
Sbjct: 166 PKRCRRACTSAVAVSACSAPAPPQPLRPPPALSFPRRPWSSR 207


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,808,669
Number of Sequences: 1657284
Number of extensions: 7027676
Number of successful extensions: 29451
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29388
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 166957702650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)