Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_C02_e395_06.seq
         (1556 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   4.5  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   5.9  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    25   5.9  
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    25   7.8  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = +2

Query: 356  GDHQRR---LCNEKXRLXKRIGGDGSRGA 433
            GDH+R    L  E+ R  + IGG  SRGA
Sbjct: 2915 GDHERHMQFLIRERMRGTQPIGGTKSRGA 2943


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 312 PTVALQVSVCSSVPPEASTPPSAQSLIRHPTSP 214
           PT  +     ++ PP  + PPS      HPT P
Sbjct: 259 PTTTITTDYTTAYPPTTNEPPSTP----HPTDP 287


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = -3

Query: 312 PTVALQVSVCSSVPPEASTPPSAQSLIRHPTSP 214
           PT        ++ PP  S PPS      HPT P
Sbjct: 259 PTTTTTTDYTTAYPPTTSEPPSTP----HPTDP 287


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 276 RSSRRKPAAPQWVNPDWQDEKP 341
           RS+  +PAA   V+P+W++  P
Sbjct: 22  RSATAQPAADTSVDPEWENALP 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,753
Number of Sequences: 2352
Number of extensions: 6427
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 183284145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)