Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_C02_e395_06.seq
         (1556 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein pr...    46   1e-04
AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-P...    46   1e-04
AE014296-517|AAF47693.2|  753|Drosophila melanogaster CG9973-PA ...    31   5.7  

>X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein
            protein.
          Length = 2175

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 46/134 (34%), Positives = 57/134 (42%), Gaps = 32/134 (23%)
 Frame = +3

Query: 114  KDQSGGLDLSMP-LKRXXXXXXXXXXXXXS---NLGSEDSLDD---ESKTEP-------- 248
            K+Q  GLDLSMP LKR                 NL   +SL+    E KT          
Sbjct: 1905 KEQMSGLDLSMPTLKRERSDDYQDDLELEGGGHNLSDNESLEGQEPEDKTTDYEKVLHKS 1964

Query: 249  ----KAASTPQGGRSSRRKPAAPQWVNPDWQDEKP-------------RXPDXVIINGVC 377
                 AA      RSSRRKPAAPQWVNP      P                +  IINGVC
Sbjct: 1965 ALAAAAAYMSNAVRSSRRKPAAPQWVNPAGAVTNPSAVVAAVAAAAAAAADNERIINGVC 2024

Query: 378  VMRSXDFXRESXET 419
            VM++ ++ R+  ++
Sbjct: 2025 VMQASEYGRDDTDS 2038


>AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-PA,
            isoform A protein.
          Length = 2175

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 46/134 (34%), Positives = 57/134 (42%), Gaps = 32/134 (23%)
 Frame = +3

Query: 114  KDQSGGLDLSMP-LKRXXXXXXXXXXXXXS---NLGSEDSLDD---ESKTEP-------- 248
            K+Q  GLDLSMP LKR                 NL   +SL+    E KT          
Sbjct: 1905 KEQMSGLDLSMPTLKRERSDDYQDDLELEGGGHNLSDNESLEGQEPEDKTTDYEKVLHKS 1964

Query: 249  ----KAASTPQGGRSSRRKPAAPQWVNPDWQDEKP-------------RXPDXVIINGVC 377
                 AA      RSSRRKPAAPQWVNP      P                +  IINGVC
Sbjct: 1965 ALAAAAAYMSNAVRSSRRKPAAPQWVNPAGAVTNPSAVVAAVAAAAAAAADNERIINGVC 2024

Query: 378  VMRSXDFXRESXET 419
            VM++ ++ R+  ++
Sbjct: 2025 VMQASEYGRDDTDS 2038


>AE014296-517|AAF47693.2|  753|Drosophila melanogaster CG9973-PA
           protein.
          Length = 753

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +1

Query: 49  VSPGSAGNSARGRGLIPPXSTGKISLEGSTCPCL*NVXRTLTIS 180
           V PGSA   A   G IPP S G  S+ G   P   +  +T+ +S
Sbjct: 295 VPPGSAAAVAAATGSIPPGSVGPNSVAGPVGPTAMSSLQTVAMS 338


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,083,360
Number of Sequences: 53049
Number of extensions: 346017
Number of successful extensions: 1630
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8737624080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)