Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_C02_e395_06.seq
         (1556 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.76 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          26   1.0  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 26.2 bits (55), Expect = 0.76
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 329 GREATXSRXGDHQRRLCNEKXRLXKRIGGDGSR 427
           G E    R  +  RRL +E  RL K + GD S+
Sbjct: 776 GMETQDYRIPEVMRRLMSEDKRLSKSVNGDQSQ 808


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = -3

Query: 300 LQVSVCSSVPPEASTPPSAQ--SLIRHPTSPRIRGYFLHRHLRNRQRP 163
           L++     VP     PPS    S  R P +PRI    L RH    +RP
Sbjct: 115 LKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRP 162


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,470
Number of Sequences: 438
Number of extensions: 2065
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 54668625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)