Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_B12_e474_04.seq
         (1443 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0W600 Cluster: Predicted drug exporter; n=1; unculture...    36   2.0  
UniRef50_Q0UEL4 Cluster: Putative uncharacterized protein; n=1; ...    36   2.6  

>UniRef50_Q0W600 Cluster: Predicted drug exporter; n=1; uncultured
           methanogenic archaeon RC-I|Rep: Predicted drug exporter
           - Uncultured methanogenic archaeon RC-I
          Length = 1188

 Score = 36.3 bits (80), Expect = 2.0
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
 Frame = +1

Query: 106 LLDTITLLMGPRMKLPKKPQTNGDTADIDDLQERVTTNIVSHKMKRTVAEVVV--PAV 273
           LL  +  L+G R+  P+K   +GD++ + +L  R+T  ++ H     +A ++V  PAV
Sbjct: 773 LLPAVLTLVGDRLFWPRKLYNSGDSSIVKNLWSRITRQVLKHSRLVLIAAILVSIPAV 830


>UniRef50_Q0UEL4 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 262

 Score = 35.9 bits (79), Expect = 2.6
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +1

Query: 457 NARNLVTASAPPDPVTPHAPRKRASRLNKEP--SRKRALKI*TIQRDGDILVDFKKEKFL 630
           N R+     APP P   H P     +    P  +R R  K+     D  +LVD K++K L
Sbjct: 93  NKRHQPMEGAPPSPAQHHGPPSVVGQEGMPPPAARPRGPKLKFTPEDDQLLVDLKEKKNL 152

Query: 631 TYK 639
           T+K
Sbjct: 153 TWK 155


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 912,952,863
Number of Sequences: 1657284
Number of extensions: 14108476
Number of successful extensions: 27539
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27527
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 151633082600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)