Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_B12_e474_04.seq
         (1443 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    33   0.007
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   1.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   1.8  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   7.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   9.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   9.8  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 32.7 bits (71), Expect = 0.007
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +1

Query: 85  PDTLNAALLDTITLLMGPRMKLPKKPQ--TNGDTADIDDLQERVTTNI 222
           P  LN A+  + +L  G R K  K+P   TNGDT+ +DD  E +  ++
Sbjct: 59  PPNLNPAVQGS-SLTEGKRSKRSKRPNGDTNGDTSQVDDQNESLEASV 105


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 468 PGDRFSTSRPCHSSRSEETSIAT 536
           P  R STS P +SSRS  TS ++
Sbjct: 85  PTQRTSTSNPTYSSRSVMTSCSS 107


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = -3

Query: 694 YTVIMKKNSTHIKINKFLI 638
           Y ++  KN+T++ +NK+L+
Sbjct: 19  YLILSNKNNTYLVLNKYLL 37


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 558 TSS*DINDTT*RRYTCRFQKRKIPNVQ 638
           TSS ++ND   RRY   F + ++  ++
Sbjct: 61  TSSVNVNDQNIRRYRTAFTREQLARLE 87


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -3

Query: 901  KF*VVYFMSITSFYILSHISLYYN 830
            K+ V+Y++++ S Y+L  I   +N
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFN 1026


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -3

Query: 901  KF*VVYFMSITSFYILSHISLYYN 830
            K+ V+Y++++ S Y+L  I   +N
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFN 1026


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,201
Number of Sequences: 336
Number of extensions: 3628
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 43018500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)