Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_B11_e466_03.seq
         (1524 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   4.4  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    25   5.8  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +2

Query: 401  RTNTXEEGGRTPSPPRHHSH*VNNKLVYCQKKKKKTRGGARYPIRPIVS 547
            R    EEGGR  +PP   +    +        KK  R  +  PIR I++
Sbjct: 1438 RWRDMEEGGRQSTPPASPARLARSSPASPTPSKKSKRHQSASPIRHILN 1486


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
 Frame = -3

Query: 346 FKNLRARLSFDTLSNSIALF----SYCACPTTSRTKSRTNLECLV*MPFSLAGLILMALS 179
           F N   ++ F  L +SI +     +   C    R K+   +  L     +L+ ++L  L+
Sbjct: 89  FSNKLVQIVFCVLYSSIFVLGVFGNVLVCYVVFRNKAMQTVTNLFITNLALSDILLCVLA 148

Query: 178 VIPFLPADIFVVLWPF 131
            +PF P+  F+  W F
Sbjct: 149 -VPFTPSYTFMRRWVF 163


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,169,679
Number of Sequences: 2352
Number of extensions: 22415
Number of successful extensions: 46
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 178813800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)