Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_B11_e466_03.seq
         (1524 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533465-1|CAG38496.1|  105|Homo sapiens RPL36 protein.               128   4e-29
BC091508-1|AAH91508.1|  105|Homo sapiens ribosomal protein L36 p...   128   4e-29
BC004971-1|AAH04971.1|  105|Homo sapiens ribosomal protein L36 p...   128   4e-29
BC003052-1|AAH03052.1|  105|Homo sapiens ribosomal protein L36 p...   128   4e-29
AB061833-1|BAB79471.1|  105|Homo sapiens ribosomal protein L36 p...   128   4e-29
AB046410-1|BAB21256.1|   32|Homo sapiens ribosomal protein L36 p...    64   2e-09
BC125162-1|AAI25163.1|  544|Homo sapiens NBPF4 protein protein.        33   2.1  
BC043522-1|AAH43522.1|  410|Homo sapiens NBPF5 protein protein.        33   2.1  
AL392088-1|CAI23469.1|  649|Homo sapiens novel protein similar t...    33   2.1  
AL390038-2|CAH70399.1|  649|Homo sapiens novel protein similar t...    33   2.1  
AL359258-3|CAI14514.1|  638|Homo sapiens novel protein protein.        33   2.1  

>CR533465-1|CAG38496.1|  105|Homo sapiens RPL36 protein.
          Length = 105

 Score =  128 bits (310), Expect = 4e-29
 Identities = 67/104 (64%), Positives = 79/104 (75%)
 Frame = +3

Query: 96  MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGH 275
           MA R+ +A+GL KGHK TK             K R +R +G  TKH+KFVRD++REV G 
Sbjct: 1   MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50

Query: 276 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 407
           A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVL
Sbjct: 51  APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94


>BC091508-1|AAH91508.1|  105|Homo sapiens ribosomal protein L36
           protein.
          Length = 105

 Score =  128 bits (310), Expect = 4e-29
 Identities = 67/104 (64%), Positives = 79/104 (75%)
 Frame = +3

Query: 96  MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGH 275
           MA R+ +A+GL KGHK TK             K R +R +G  TKH+KFVRD++REV G 
Sbjct: 1   MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50

Query: 276 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 407
           A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVL
Sbjct: 51  APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94


>BC004971-1|AAH04971.1|  105|Homo sapiens ribosomal protein L36
           protein.
          Length = 105

 Score =  128 bits (310), Expect = 4e-29
 Identities = 67/104 (64%), Positives = 79/104 (75%)
 Frame = +3

Query: 96  MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGH 275
           MA R+ +A+GL KGHK TK             K R +R +G  TKH+KFVRD++REV G 
Sbjct: 1   MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50

Query: 276 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 407
           A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVL
Sbjct: 51  APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94


>BC003052-1|AAH03052.1|  105|Homo sapiens ribosomal protein L36
           protein.
          Length = 105

 Score =  128 bits (310), Expect = 4e-29
 Identities = 67/104 (64%), Positives = 79/104 (75%)
 Frame = +3

Query: 96  MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGH 275
           MA R+ +A+GL KGHK TK             K R +R +G  TKH+KFVRD++REV G 
Sbjct: 1   MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50

Query: 276 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 407
           A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVL
Sbjct: 51  APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94


>AB061833-1|BAB79471.1|  105|Homo sapiens ribosomal protein L36
           protein.
          Length = 105

 Score =  128 bits (310), Expect = 4e-29
 Identities = 67/104 (64%), Positives = 79/104 (75%)
 Frame = +3

Query: 96  MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGH 275
           MA R+ +A+GL KGHK TK             K R +R +G  TKH+KFVRD++REV G 
Sbjct: 1   MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50

Query: 276 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 407
           A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVL
Sbjct: 51  APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94


>AB046410-1|BAB21256.1|   32|Homo sapiens ribosomal protein L36
           protein.
          Length = 32

 Score = 63.7 bits (148), Expect = 2e-09
 Identities = 29/32 (90%), Positives = 32/32 (100%)
 Frame = +3

Query: 306 LKVSKDKRALKFLKRRLGTHIRAKRKREELSN 401
           LKVSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1   LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32


>BC125162-1|AAI25163.1|  544|Homo sapiens NBPF4 protein protein.
          Length = 544

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 341 LEASPRHTHPREEEA*RA--QQRTNTXEEGGRTPSPPRHH 454
           L     H H  EEEA     + + +  EE G+ P PPRHH
Sbjct: 242 LVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRHH 281


>BC043522-1|AAH43522.1|  410|Homo sapiens NBPF5 protein protein.
          Length = 410

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 341 LEASPRHTHPREEEA*RA--QQRTNTXEEGGRTPSPPRHH 454
           L     H H  EEEA     + + +  EE G+ P PPRHH
Sbjct: 301 LVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRHH 340


>AL392088-1|CAI23469.1|  649|Homo sapiens novel protein similar to
           FLJ32883 containing DUF1220 domains protein.
          Length = 649

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 341 LEASPRHTHPREEEA*RA--QQRTNTXEEGGRTPSPPRHH 454
           L     H H  EEEA     + + +  EE G+ P PPRHH
Sbjct: 253 LVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRHH 292


>AL390038-2|CAH70399.1|  649|Homo sapiens novel protein similar to
           FLJ32883 containing DUF1220 domains protein.
          Length = 649

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 341 LEASPRHTHPREEEA*RA--QQRTNTXEEGGRTPSPPRHH 454
           L     H H  EEEA     + + +  EE G+ P PPRHH
Sbjct: 253 LVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRHH 292


>AL359258-3|CAI14514.1|  638|Homo sapiens novel protein protein.
          Length = 638

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 341 LEASPRHTHPREEEA*RA--QQRTNTXEEGGRTPSPPRHH 454
           L     H H  EEEA     + + +  EE G+ P PPRHH
Sbjct: 242 LVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRHH 281


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,748,034
Number of Sequences: 237096
Number of extensions: 3655592
Number of successful extensions: 14903
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14898
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22690981476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)