Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_B10_e458_04.seq
(1548 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 35 0.20
11_01_0066 - 536281-537196,537397-537452 31 1.9
03_01_0515 - 3864796-3865425 31 1.9
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 31 1.9
07_01_0577 - 4286048-4286186,4286600-4286660,4286957-4287089,428... 31 2.4
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340... 31 2.4
02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623 31 3.2
11_06_0610 - 25449085-25453284 30 4.3
12_02_1174 - 26696869-26698191 30 5.7
05_01_0192 + 1394342-1396645 30 5.7
03_01_0023 + 198414-198968 30 5.7
11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809... 29 7.5
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 29 7.5
05_04_0411 + 21057838-21058878,21059723-21059926,21060011-21060238 29 7.5
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 29 7.5
03_05_0576 + 25765137-25766420 29 7.5
06_01_0690 + 5033943-5034740 29 9.9
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 9.9
03_02_0342 - 7645323-7645909,7646323-7646491 29 9.9
01_01_0715 - 5542648-5543219,5543352-5543544 29 9.9
>10_08_0936 - 21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 34.7 bits (76), Expect = 0.20
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +3
Query: 1362 ALXXLXXPXPPXXTSPS--PPXXPLXPXXXTXXPSPXPXXXLLPPXPXXXXXP 1514
AL P PP T+ S PP PL P P P P PP P P
Sbjct: 79 ALAPTPTPPPPSSTASSSLPPPTPLLPKHQQAPPPPPPTQSHQPPPPVAVRAP 131
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = +3
Query: 1383 PXPPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPPXP 1496
P PP +P PP + P P P + PP P
Sbjct: 230 PPPPSTATPPPPSPTPTTTRASPTPPPIPTATVRPPPP 267
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 1383 PXPPXXTSPSP-PXXPLXPXXXT-XXPSPXPXXXLLPPXP 1496
P PP +P P P P P T PSP P P P
Sbjct: 215 PPPPSIATPPPSPASPPPPSTATPPPPSPTPTTTRASPTP 254
>03_01_0515 - 3864796-3865425
Length = 209
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +3
Query: 1383 PXPPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPPXP 1496
P PP SP PP P P T P P L+PP P
Sbjct: 40 PSPPTEASP-PPLAP--PPSVTSSPPPPAAGPLMPPPP 74
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 31.5 bits (68), Expect = 1.9
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 1383 PXPPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLP-PXP 1496
P PP PSPP P P P P P P P P
Sbjct: 125 PQPPRAWDPSPPPPPPAPAAPVLVPPPAPAPRPAPAPAP 163
>07_01_0577 - 4286048-4286186,4286600-4286660,4286957-4287089,
4287286-4287350,4288346-4288451,4288529-4288750,
4289619-4289852,4289948-4290037,4290605-4291507
Length = 650
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +3
Query: 1374 LXXPXPPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPPXPXXXXXP 1514
L P P +P PP P P P P PP P P
Sbjct: 44 LFTPAPRHAATPPPPPPPPTPAVEPTLPIPPASTPPTPPQPSASTEP 90
>03_06_0399 - 33632811-33633107,33633236-33633385,33633705-33634029,
33635315-33635982,33636967-33637212,33637405-33637545,
33637807-33637856,33637943-33638060,33638304-33638910,
33639339-33639463,33639813-33639869,33639952-33640023,
33640100-33640232,33640305-33640428,33640522-33640576,
33640672-33641322
Length = 1272
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +3
Query: 1383 PXPPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPPXPXXXXXP 1514
P PP T+PSPP P +P P PP P P
Sbjct: 66 PSPP--TNPSPPPPPPLDADAAAEAAPSPALTSPPPNPSSSPLP 107
>02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623
Length = 400
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 1513 GXXXXXGXGGRXXXXGXGEGXXVXXXGLSGXXGGXGXVXXGGXG 1382
G G GG G G G G G GG G GG G
Sbjct: 263 GGRGGAGAGGGHGGAGAGAGGARGGAGAGGGHGGAGAGAGGGRG 306
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3
Query: 1383 PXPPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPPXPXXXXXP 1514
P P ++P PP PL P T SP +PP P P
Sbjct: 983 PPSPAKSTP-PPEKPLPPHTPTINSSPPSEEEYMPPSPVKSSPP 1025
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 1389 PPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPPXPXXXXXP 1514
PP SP PP + P P P P +LPP P P
Sbjct: 1162 PPPIKSPPPPAPVISPPPPVKSPPP-PAPVILPPPPVKSPPP 1202
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 1389 PPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPPXPXXXXXP 1514
PP SP PP + P P P P +LPP P P
Sbjct: 1194 PPPVKSPPPPAPVISPPPPVKSPPP-PAPVILPPPPVKSPPP 1234
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 5.7
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 1383 PXPPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPPXP 1496
P PP P PP P P P P L PP P
Sbjct: 153 PPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSP 190
>05_01_0192 + 1394342-1396645
Length = 767
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +3
Query: 1389 PPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPP 1490
PP +P P P P T PSP +PP
Sbjct: 279 PPASLNPMLPSPPQLPGVSTTTPSPPASTVSMPP 312
>03_01_0023 + 198414-198968
Length = 184
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 1513 GXXXXXGXGGRXXXXGXGEGXXVXXXGLSGXXGGXGXVXXGGXG 1382
G G GG G G G G SG GG G GG G
Sbjct: 55 GGGSGGGSGGGGGSGGGGSGGGGSGGGGSGGGGGGGSGGGGGGG 98
>11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,
8090537-8090609,8090694-8090804,8090901-8091074,
8091184-8091574,8091662-8092283,8092379-8093251,
8093294-8093800
Length = 1016
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +3
Query: 1383 PXPPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPP 1490
P PP +PSPP PL P + P L P
Sbjct: 545 PSPPQDPAPSPPHDPLAPSLPQAPAATPPQDPALTP 580
>07_03_0792 - 21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 1383 PXPPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPPXP 1496
P PP SP PP P P P P P P P
Sbjct: 575 PMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPP 612
>05_04_0411 + 21057838-21058878,21059723-21059926,21060011-21060238
Length = 490
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = +3
Query: 1383 PXPP----XXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPPXP 1496
P PP ++PSPP P+P P L PP P
Sbjct: 62 PPPPRISLSTSTPSPPVTTTTTTTSAPNPNPDPNPTLTPPNP 103
>05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 7/43 (16%)
Frame = +3
Query: 1383 PXPPXXTSPSPP-------XXPLXPXXXTXXPSPXPXXXLLPP 1490
P PP SPSPP PL P T P P PP
Sbjct: 82 PPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAPVPAAAPP 124
>03_05_0576 + 25765137-25766420
Length = 427
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 1383 PXPPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPP 1490
P P SPSPP P P P P + PP
Sbjct: 69 PSPSPSPSPSPPPQPSSPPPPPPSPPPAAAVSVSPP 104
>06_01_0690 + 5033943-5034740
Length = 265
Score = 29.1 bits (62), Expect = 9.9
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = -3
Query: 1513 GXXXXXGXGGRXXXXGXGEGXXVXXXGLSGXXGGXGXVXXGGXGXXSXXRAXXXXRYXRX 1334
G G GG+ G G G G G GG G GG G Y
Sbjct: 153 GGGGGGGGGGQNGGSGYGSGSGYGQAGGYGPYGG-GYAQGGGGGGGGGGGQNGGSGYGSG 211
Query: 1333 XXXXXGXRGGIRP 1295
G GG P
Sbjct: 212 SGSGYGQAGGYGP 224
>05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 1374 LXXPXPPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPPXPXXXXXP 1514
L P T P PP P P P P P PP P P
Sbjct: 62 LPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISP 108
>03_02_0342 - 7645323-7645909,7646323-7646491
Length = 251
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 1389 PPXXTSPSPPXXPLXPXXXTXXPSPXPXXXLLPPXP 1496
PP P PP P T P P P PP P
Sbjct: 173 PPPPPPPRPPAPEYKPPTPTLTPIPTPEPSYGPPAP 208
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 1401 TSPSPPXXPLXPXXXTXXPSPXP 1469
T+PSPP P P T PSP P
Sbjct: 141 TTPSPPPPPTVPAAPTPRPSPPP 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,555,041
Number of Sequences: 37544
Number of extensions: 561593
Number of successful extensions: 2175
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2062
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4988906440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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