Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_B08_e442_04.seq
         (1297 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    25   4.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   4.8  

>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 291 QQKVYPQTAYARATSPQRGQSPKPQPSC*RTLRKSAS-ASRTF 416
           Q K Y QT  +   +P R   P  +PS  ++L ++AS  +R+F
Sbjct: 358 QTKRYSQTVES-TNAPSRSPGPDEEPSVYKSLAEAASKMARSF 399


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 12/61 (19%), Positives = 16/61 (26%)
 Frame = +2

Query: 467  NGQQXFRXAPXXXXRXPPXXPXTXFXXXXXXXXXXXXXXXXXPXPXKXXPNPXXFPGKXE 646
            NG    R +     R  P      F                 P P +  P+P   P   +
Sbjct: 896  NGSSSGRDSQPSSARSTPKKQNLKFIDEASTPSTSAMAATIVPNPVQASPSPATAPAPAK 955

Query: 647  T 649
            T
Sbjct: 956  T 956


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 798,526
Number of Sequences: 2352
Number of extensions: 12704
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 149192655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)