Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_B07_e434_03.seq
         (1548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   1.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   5.9  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 1.5
 Identities = 17/66 (25%), Positives = 20/66 (30%)
 Frame = -3

Query: 1396 GGXXVXGGASRXXGGXXXXXRSX*XGXGRXRXXXGGGXGEXGXXGGXGXTXXXXGXXGRA 1217
            G   V G  +   GG            G  R   G G G  G  GG G      G  G  
Sbjct: 522  GSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGGVGATGAE 581

Query: 1216 XRXERR 1199
             + + R
Sbjct: 582  KQQQNR 587


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
            transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 16/68 (23%), Positives = 18/68 (26%)
 Frame = -3

Query: 1321 GXGRXRXXXGGGXGEXGXXGGXGXTXXXXGXXGRAXRXERRXXXXXXXRVXXXXXGXGXX 1142
            G G      GGG G  G  G    +    G  GR+                    G G  
Sbjct: 651  GSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGVA 710

Query: 1141 GPXXGGXG 1118
            G    G G
Sbjct: 711  GMMSTGAG 718



 Score = 24.6 bits (51), Expect = 7.8
 Identities = 14/55 (25%), Positives = 15/55 (27%)
 Frame = -3

Query: 1450 AAXXAXXXMXXXXXRXXAGGXXVXGGASRXXGGXXXXXRSX*XGXGRXRXXXGGG 1286
            AA      +         GG    GG     G       S   G G  R   GGG
Sbjct: 636  AAAAVAAAVAASVSPGSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGG 690


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 950,616
Number of Sequences: 2352
Number of extensions: 15497
Number of successful extensions: 44
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 182064960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)