Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_B07_e434_03.seq
(1548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 40 0.025
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 40 0.025
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 40 0.025
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 40 0.025
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 40 0.025
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 40 0.025
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 40 0.025
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 35 0.92
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 34 1.6
BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein LO... 34 1.6
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 34 1.6
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 34 1.6
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 29 2.7
AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 33 2.8
AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 33 2.8
AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 33 2.8
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 29 2.9
BC070071-1|AAH70071.1| 1271|Homo sapiens RBM16 protein protein. 33 3.7
AL591499-2|CAH70694.1| 1271|Homo sapiens RNA binding motif prote... 33 3.7
AL136976-1|CAI21482.1| 1271|Homo sapiens RNA binding motif prote... 33 3.7
AL121952-2|CAI21474.1| 1271|Homo sapiens RNA binding motif prote... 33 3.7
AB040955-1|BAA96046.1| 1044|Homo sapiens KIAA1522 protein protein. 33 3.7
AB029039-1|BAA83068.2| 1330|Homo sapiens KIAA1116 protein protein. 33 3.7
Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase... 32 4.9
DQ141240-1|AAZ73768.1| 729|Homo sapiens PARF protein. 31 8.6
BC035786-1|AAH35786.1| 673|Homo sapiens C9orf86 protein protein. 31 8.6
BC021095-1|AAH21095.2| 686|Homo sapiens chromosome 9 open readi... 31 8.6
AY453840-1|AAR24087.1| 538|Homo sapiens atherin protein. 31 8.6
AL355987-12|CAI12691.1| 448|Homo sapiens chromosome 9 open read... 31 8.6
AL355987-7|CAI12685.1| 729|Homo sapiens chromosome 9 open readi... 31 8.6
AK027586-1|BAB55213.1| 614|Homo sapiens protein ( Homo sapiens ... 31 8.6
AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens ... 31 8.6
AK001184-1|BAA91541.1| 539|Homo sapiens protein ( Homo sapiens ... 31 8.6
AK000963-1|BAA91446.1| 539|Homo sapiens protein ( Homo sapiens ... 31 8.6
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 39.9 bits (89), Expect = 0.025
Identities = 32/131 (24%), Positives = 38/131 (29%), Gaps = 1/131 (0%)
Frame = +3
Query: 1116 SPXPPXXGPXXPXPXXXXXTRXXXXXXXRLSXRXARPXXPXLXXVXPSPPXXPXSPXPPP 1295
SP PP P P T S R P P P SP PPP
Sbjct: 562 SPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPP 621
Query: 1296 XXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPA-XXRXXXXXMXXXAXXAAXGRRPGP 1472
R P P R PP R +P P+ + + A +P
Sbjct: 622 KR-RASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNK 680
Query: 1473 XXAPXPPPXXP 1505
+P P P P
Sbjct: 681 RHSPSPRPRAP 691
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 39.9 bits (89), Expect = 0.025
Identities = 32/131 (24%), Positives = 38/131 (29%), Gaps = 1/131 (0%)
Frame = +3
Query: 1116 SPXPPXXGPXXPXPXXXXXTRXXXXXXXRLSXRXARPXXPXLXXVXPSPPXXPXSPXPPP 1295
SP PP P P T S R P P P SP PPP
Sbjct: 562 SPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPP 621
Query: 1296 XXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPA-XXRXXXXXMXXXAXXAAXGRRPGP 1472
R P P R PP R +P P+ + + A +P
Sbjct: 622 KR-RASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNK 680
Query: 1473 XXAPXPPPXXP 1505
+P P P P
Sbjct: 681 RHSPSPRPRAP 691
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 39.9 bits (89), Expect = 0.025
Identities = 32/131 (24%), Positives = 38/131 (29%), Gaps = 1/131 (0%)
Frame = +3
Query: 1116 SPXPPXXGPXXPXPXXXXXTRXXXXXXXRLSXRXARPXXPXLXXVXPSPPXXPXSPXPPP 1295
SP PP P P T S R P P P SP PPP
Sbjct: 571 SPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPP 630
Query: 1296 XXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPA-XXRXXXXXMXXXAXXAAXGRRPGP 1472
R P P R PP R +P P+ + + A +P
Sbjct: 631 KR-RASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNK 689
Query: 1473 XXAPXPPPXXP 1505
+P P P P
Sbjct: 690 RHSPSPRPRAP 700
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 39.9 bits (89), Expect = 0.025
Identities = 32/131 (24%), Positives = 38/131 (29%), Gaps = 1/131 (0%)
Frame = +3
Query: 1116 SPXPPXXGPXXPXPXXXXXTRXXXXXXXRLSXRXARPXXPXLXXVXPSPPXXPXSPXPPP 1295
SP PP P P T S R P P P SP PPP
Sbjct: 562 SPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPP 621
Query: 1296 XXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPA-XXRXXXXXMXXXAXXAAXGRRPGP 1472
R P P R PP R +P P+ + + A +P
Sbjct: 622 KR-RASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNK 680
Query: 1473 XXAPXPPPXXP 1505
+P P P P
Sbjct: 681 RHSPSPRPRAP 691
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 39.9 bits (89), Expect = 0.025
Identities = 32/131 (24%), Positives = 38/131 (29%), Gaps = 1/131 (0%)
Frame = +3
Query: 1116 SPXPPXXGPXXPXPXXXXXTRXXXXXXXRLSXRXARPXXPXLXXVXPSPPXXPXSPXPPP 1295
SP PP P P T S R P P P SP PPP
Sbjct: 571 SPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPP 630
Query: 1296 XXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPA-XXRXXXXXMXXXAXXAAXGRRPGP 1472
R P P R PP R +P P+ + + A +P
Sbjct: 631 KR-RASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNK 689
Query: 1473 XXAPXPPPXXP 1505
+P P P P
Sbjct: 690 RHSPSPRPRAP 700
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 39.9 bits (89), Expect = 0.025
Identities = 32/131 (24%), Positives = 38/131 (29%), Gaps = 1/131 (0%)
Frame = +3
Query: 1116 SPXPPXXGPXXPXPXXXXXTRXXXXXXXRLSXRXARPXXPXLXXVXPSPPXXPXSPXPPP 1295
SP PP P P T S R P P P SP PPP
Sbjct: 560 SPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPP 619
Query: 1296 XXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPA-XXRXXXXXMXXXAXXAAXGRRPGP 1472
R P P R PP R +P P+ + + A +P
Sbjct: 620 KR-RASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNK 678
Query: 1473 XXAPXPPPXXP 1505
+P P P P
Sbjct: 679 RHSPSPRPRAP 689
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 39.9 bits (89), Expect = 0.025
Identities = 32/131 (24%), Positives = 38/131 (29%), Gaps = 1/131 (0%)
Frame = +3
Query: 1116 SPXPPXXGPXXPXPXXXXXTRXXXXXXXRLSXRXARPXXPXLXXVXPSPPXXPXSPXPPP 1295
SP PP P P T S R P P P SP PPP
Sbjct: 560 SPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPP 619
Query: 1296 XXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPA-XXRXXXXXMXXXAXXAAXGRRPGP 1472
R P P R PP R +P P+ + + A +P
Sbjct: 620 KR-RASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNK 678
Query: 1473 XXAPXPPPXXP 1505
+P P P P
Sbjct: 679 RHSPSPRPRAP 689
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 34.7 bits (76), Expect = 0.92
Identities = 32/108 (29%), Positives = 32/108 (29%), Gaps = 10/108 (9%)
Frame = +3
Query: 1212 RXARPXXPXLXXVXPSPPXXPXS--PXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPPXT 1385
R A P P P PP P S P PPP R P P PP P
Sbjct: 274 RQAPPPPPPSRGGPPPPPPPPHSSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVE 333
Query: 1386 XXPPAXXRXXXXXMXXXAXXAAXGRRP--------GPXXAPXPPPXXP 1505
PP R A G P GP P PPP P
Sbjct: 334 VPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPP 381
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 33.9 bits (74), Expect = 1.6
Identities = 31/108 (28%), Positives = 32/108 (29%), Gaps = 10/108 (9%)
Frame = +3
Query: 1212 RXARPXXPXLXXVXPSPPXXPXS--PXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPPXT 1385
R A P P P PP P + P PPP R P P PP P
Sbjct: 274 RQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVA 333
Query: 1386 XXPPAXXRXXXXXMXXXAXXAAXGRRP--------GPXXAPXPPPXXP 1505
PP R A G P GP P PPP P
Sbjct: 334 VPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPP 381
>BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein
LOC339344 protein.
Length = 399
Score = 33.9 bits (74), Expect = 1.6
Identities = 25/94 (26%), Positives = 27/94 (28%)
Frame = +3
Query: 1224 PXXPXLXXVXPSPPXXPXSPXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPAX 1403
P P L V PSPP P P PPP P + LR R A
Sbjct: 228 PPPPPLAQVAPSPPSPPPPPRPPPTLSASDPSLDF-LRAQQETANAIRELAGTLRQGLAK 286
Query: 1404 XRXXXXXMXXXAXXAAXGRRPGPXXAPXPPPXXP 1505
+ P P P PPP P
Sbjct: 287 LSEALSALLPLLPGTPVDSLPPPLPPPPPPPPPP 320
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 33.9 bits (74), Expect = 1.6
Identities = 31/108 (28%), Positives = 32/108 (29%), Gaps = 10/108 (9%)
Frame = +3
Query: 1212 RXARPXXPXLXXVXPSPPXXPXS--PXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPPXT 1385
R A P P P PP P + P PPP R P P PP P
Sbjct: 274 RQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVA 333
Query: 1386 XXPPAXXRXXXXXMXXXAXXAAXGRRP--------GPXXAPXPPPXXP 1505
PP R A G P GP P PPP P
Sbjct: 334 VPPPPPNRMYPPPPPALLSSAPSGPPPPPPSVLGVGPVAPPPPPPPPP 381
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 33.9 bits (74), Expect = 1.6
Identities = 31/108 (28%), Positives = 32/108 (29%), Gaps = 10/108 (9%)
Frame = +3
Query: 1212 RXARPXXPXLXXVXPSPPXXPXS--PXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPPXT 1385
R A P P P PP P + P PPP R P P PP P
Sbjct: 274 RQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVA 333
Query: 1386 XXPPAXXRXXXXXMXXXAXXAAXGRRP--------GPXXAPXPPPXXP 1505
PP R A G P GP P PPP P
Sbjct: 334 VPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPP 381
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 29.1 bits (62), Expect(2) = 2.7
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +3
Query: 1254 PSPPXXPXSPXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPA 1400
P+P P P PPP P P + PP L PP PPA
Sbjct: 644 PAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPP---PPPA 689
Score = 22.6 bits (46), Expect(2) = 2.7
Identities = 9/27 (33%), Positives = 9/27 (33%)
Frame = +3
Query: 1464 PGPXXAPXPPPXXPXXXXXAXXSPXAP 1544
P P P PPP P P P
Sbjct: 685 PPPPAMPSPPPPPPPAAAPLAAPPEEP 711
>AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 33.1 bits (72), Expect = 2.8
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Frame = +3
Query: 1254 PSP--PXXPXSPXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPAXXRXXXXXM 1427
PSP P P P PP +LRP P P +A P +
Sbjct: 108 PSPRRPLVPAGPAPP--AAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPA- 164
Query: 1428 XXXAXXAAXGRRPGPXXAPXPPPXXP 1505
A A G PGP P P P P
Sbjct: 165 -ALAARAGPGPGPGPGPGPGPGPGKP 189
>AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 33.1 bits (72), Expect = 2.8
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Frame = +3
Query: 1254 PSP--PXXPXSPXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPAXXRXXXXXM 1427
PSP P P P PP +LRP P P +A P +
Sbjct: 108 PSPRRPLVPAGPAPP--AAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPA- 164
Query: 1428 XXXAXXAAXGRRPGPXXAPXPPPXXP 1505
A A G PGP P P P P
Sbjct: 165 -ALAARAGPGPGPGPGPGPGPGPGKP 189
>AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 33.1 bits (72), Expect = 2.8
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Frame = +3
Query: 1254 PSP--PXXPXSPXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPAXXRXXXXXM 1427
PSP P P P PP +LRP P P +A P +
Sbjct: 108 PSPRRPLVPAGPAPP--AAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPA- 164
Query: 1428 XXXAXXAAXGRRPGPXXAPXPPPXXP 1505
A A G PGP P P P P
Sbjct: 165 -ALAARAGPGPGPGPGPGPGPGPGKP 189
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 29.1 bits (62), Expect(2) = 2.9
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +3
Query: 1254 PSPPXXPXSPXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPA 1400
P+P P P PPP P P + PP L PP PPA
Sbjct: 99 PAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPP---PPPA 144
Score = 22.6 bits (46), Expect(2) = 2.9
Identities = 9/27 (33%), Positives = 9/27 (33%)
Frame = +3
Query: 1464 PGPXXAPXPPPXXPXXXXXAXXSPXAP 1544
P P P PPP P P P
Sbjct: 140 PPPPAMPSPPPPPPPAAAPLAAPPEEP 166
>BC070071-1|AAH70071.1| 1271|Homo sapiens RBM16 protein protein.
Length = 1271
Score = 32.7 bits (71), Expect = 3.7
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +3
Query: 1224 PXXPXLXXVXPSPPXXPXS-PXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPP 1379
P P + V PP P S P PPP + P P PP + PP
Sbjct: 644 PVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPP 696
>AL591499-2|CAH70694.1| 1271|Homo sapiens RNA binding motif protein 16
protein.
Length = 1271
Score = 32.7 bits (71), Expect = 3.7
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +3
Query: 1224 PXXPXLXXVXPSPPXXPXS-PXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPP 1379
P P + V PP P S P PPP + P P PP + PP
Sbjct: 644 PVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPP 696
>AL136976-1|CAI21482.1| 1271|Homo sapiens RNA binding motif protein 16
protein.
Length = 1271
Score = 32.7 bits (71), Expect = 3.7
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +3
Query: 1224 PXXPXLXXVXPSPPXXPXS-PXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPP 1379
P P + V PP P S P PPP + P P PP + PP
Sbjct: 644 PVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPP 696
>AL121952-2|CAI21474.1| 1271|Homo sapiens RNA binding motif protein 16
protein.
Length = 1271
Score = 32.7 bits (71), Expect = 3.7
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +3
Query: 1224 PXXPXLXXVXPSPPXXPXS-PXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPP 1379
P P + V PP P S P PPP + P P PP + PP
Sbjct: 644 PVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPP 696
>AB040955-1|BAA96046.1| 1044|Homo sapiens KIAA1522 protein protein.
Length = 1044
Score = 32.7 bits (71), Expect = 3.7
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 1253 PXPXXXPPLXPPPSX-XXPXSAXPXLXAPAXXPXAXXXXTXPAXDXXPP 1396
P P P PPPS P A P L APA P T A PP
Sbjct: 612 PHPKVPAPFSPPPSKPRSPNPAAPALAAPAVVPGP--VSTTDASPQSPP 658
>AB029039-1|BAA83068.2| 1330|Homo sapiens KIAA1116 protein protein.
Length = 1330
Score = 32.7 bits (71), Expect = 3.7
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +3
Query: 1224 PXXPXLXXVXPSPPXXPXS-PXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPP 1379
P P + V PP P S P PPP + P P PP + PP
Sbjct: 703 PVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPP 755
>Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase II
transcription factor protein.
Length = 1083
Score = 32.3 bits (70), Expect = 4.9
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Frame = +3
Query: 1254 PSP--PXXPXSPXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPAXXRXXXXXM 1427
PSP P P P PP +LRP P P +A P +
Sbjct: 108 PSPRRPLVPAGPAPP--AAKLRPPPEGSAGACAPVPAAAAVAAGPEPAPAGPAKPAGPA- 164
Query: 1428 XXXAXXAAXGRRPGPXXAPXPPPXXP 1505
A A G PGP P P P P
Sbjct: 165 ---ALAARAGPGPGPGPGPGPGPGKP 187
>DQ141240-1|AAZ73768.1| 729|Homo sapiens PARF protein.
Length = 729
Score = 31.5 bits (68), Expect = 8.6
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 1259 PXXXPPLXPPPSXXXPXSAXPXLXAPAXXPXAXXXXTXPAXDXXPP 1396
P PP+ PPS P A P AP + T PA + PP
Sbjct: 330 PSSVPPV--PPSEALPPPACPSAPAPRRSIISRLFGTSPATEAAPP 373
>BC035786-1|AAH35786.1| 673|Homo sapiens C9orf86 protein protein.
Length = 673
Score = 31.5 bits (68), Expect = 8.6
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 1259 PXXXPPLXPPPSXXXPXSAXPXLXAPAXXPXAXXXXTXPAXDXXPP 1396
P PP+ PPS P A P AP + T PA + PP
Sbjct: 288 PSSVPPV--PPSEALPPPACPSAPAPRRSIISRLFGTSPATEAAPP 331
>BC021095-1|AAH21095.2| 686|Homo sapiens chromosome 9 open reading
frame 86 protein.
Length = 686
Score = 31.5 bits (68), Expect = 8.6
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 1259 PXXXPPLXPPPSXXXPXSAXPXLXAPAXXPXAXXXXTXPAXDXXPP 1396
P PP+ PPS P A P AP + T PA + PP
Sbjct: 287 PSSVPPV--PPSEALPPPACPSAPAPRRSIISRLFGTSPATEAAPP 330
>AY453840-1|AAR24087.1| 538|Homo sapiens atherin protein.
Length = 538
Score = 31.5 bits (68), Expect = 8.6
Identities = 26/111 (23%), Positives = 30/111 (27%), Gaps = 8/111 (7%)
Frame = +3
Query: 1089 GXALVXGVXSPXPPXXGPXXPXPXXXXXTRXXXXXXXRLSXRXARPX----XPXLXXVXP 1256
G +P P P P P + P P P
Sbjct: 117 GAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAP 176
Query: 1257 --SPPXXPXSP--XPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPP 1397
+PP P +P PP R P P R PP APP PP
Sbjct: 177 LAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPP 227
>AL355987-12|CAI12691.1| 448|Homo sapiens chromosome 9 open reading
frame 86 protein.
Length = 448
Score = 31.5 bits (68), Expect = 8.6
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 1259 PXXXPPLXPPPSXXXPXSAXPXLXAPAXXPXAXXXXTXPAXDXXPP 1396
P PP+ PPS P A P AP + T PA + PP
Sbjct: 124 PSSVPPV--PPSEALPPPACPSAPAPRRSIISRLFGTSPATEAAPP 167
>AL355987-7|CAI12685.1| 729|Homo sapiens chromosome 9 open reading
frame 86 protein.
Length = 729
Score = 31.5 bits (68), Expect = 8.6
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 1259 PXXXPPLXPPPSXXXPXSAXPXLXAPAXXPXAXXXXTXPAXDXXPP 1396
P PP+ PPS P A P AP + T PA + PP
Sbjct: 330 PSSVPPV--PPSEALPPPACPSAPAPRRSIISRLFGTSPATEAAPP 373
>AK027586-1|BAB55213.1| 614|Homo sapiens protein ( Homo sapiens cDNA
FLJ14680 fis, clone NT2RP2004242, weakly similar to
NEUROFILAMENT TRIPLET H PROTEIN. ).
Length = 614
Score = 31.5 bits (68), Expect = 8.6
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 1259 PXXXPPLXPPPSXXXPXSAXPXLXAPAXXPXAXXXXTXPAXDXXPP 1396
P PP+ PPS P A P AP + T PA + PP
Sbjct: 215 PSSVPPV--PPSEALPPPACPSAPAPRRSIISRLFGTSPATEAAPP 258
>AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens cDNA:
FLJ22184 fis, clone HRC00983. ).
Length = 616
Score = 31.5 bits (68), Expect = 8.6
Identities = 27/98 (27%), Positives = 29/98 (29%), Gaps = 1/98 (1%)
Frame = +3
Query: 1254 PSPPXXPXSPXPPPXXXRLRPXPXYXLRXXXXXPPXXRLAPPXTXXPPAXXRXXXXXMXX 1433
PSPP P + PP L P PP LA P P A +
Sbjct: 99 PSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNA--------LAV 150
Query: 1434 XAXXAAXGRRPG-PXXAPXPPPXXPXXXXXAXXSPXAP 1544
A P P AP PP P A AP
Sbjct: 151 HLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAP 188
>AK001184-1|BAA91541.1| 539|Homo sapiens protein ( Homo sapiens cDNA
FLJ10322 fis, clone NT2RM2000522, weakly similar to SKIN
SECRETORY PROTEIN XP2 PRECURSOR. ).
Length = 539
Score = 31.5 bits (68), Expect = 8.6
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 1259 PXXXPPLXPPPSXXXPXSAXPXLXAPAXXPXAXXXXTXPAXDXXPP 1396
P PP+ PPS P A P AP + T PA + PP
Sbjct: 215 PSSVPPV--PPSEALPPPACPSAPAPRRSIISRLFGTSPATEAAPP 258
>AK000963-1|BAA91446.1| 539|Homo sapiens protein ( Homo sapiens cDNA
FLJ10101 fis, clone HEMBA1002475, weakly similar to SKIN
SECRETORY PROTEIN XP2 PRECURSOR. ).
Length = 539
Score = 31.5 bits (68), Expect = 8.6
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 1259 PXXXPPLXPPPSXXXPXSAXPXLXAPAXXPXAXXXXTXPAXDXXPP 1396
P PP+ PPS P A P AP + T PA + PP
Sbjct: 215 PSSVPPV--PPSEALPPPACPSAPAPRRSIISRLFGTSPATEAAPP 258
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,663,321
Number of Sequences: 237096
Number of extensions: 2968253
Number of successful extensions: 12809
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 6158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10252
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 23129454548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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